RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 IGHV1OR15-1A0A075B7D0 117 aa10.64□□□□□ -0.71
CDK3-201ENST00000425876 OR11H12B2RN74 326 aa10.64□□□□□ -0.71
CDK3-201ENST00000425876 NXPH4O95158 308 aa10.64□□□□□ -0.71
CDK3-201ENST00000425876 RAB4AP20338 218 aa10.64□□□□□ -0.71
CDK3-201ENST00000425876 CHCHD1Q96BP2 118 aaKnown RBP10.64□□□□□ -0.71
CDK3-201ENST00000425876 RNF185Q96GF1 192 aa10.64□□□□□ -0.71
CDK3-201ENST00000425876 SAMD10Q9BYL1 202 aa10.64□□□□□ -0.71
CDK3-201ENST00000425876 PHLDA3Q9Y5J5 127 aa10.64□□□□□ -0.71
CDK3-201ENST00000425876 RBMY1BA6NDE4 496 aaKnown RBP10.63□□□□□ -0.71
CDK3-201ENST00000425876 RBMY1EA6NEQ0 496 aaKnown RBP10.63□□□□□ -0.71
CDK3-201ENST00000425876 CRXO43186 299 aaPredicted RBP10.63□□□□□ -0.71
CDK3-201ENST00000425876 RBMY1DP0C7P1 496 aaKnown RBP10.63□□□□□ -0.71
CDK3-201ENST00000425876 BEAN1Q3B7T3 259 aa10.63□□□□□ -0.71
CDK3-201ENST00000425876 PYY3Q5JQD4 70 aa10.63□□□□□ -0.71
CDK3-201ENST00000425876 NIT1Q86X76 327 aa10.63□□□□□ -0.71
CDK3-201ENST00000425876 CITED1Q99966 193 aa10.63□□□□□ -0.71
CDK3-201ENST00000425876 C20orf144Q9BQM9 153 aa10.63□□□□□ -0.71
CDK3-201ENST00000425876 LAMTOR2Q9Y2Q5 125 aa10.63□□□□□ -0.71
CDK3-201ENST00000425876 D6R8Y8 96 aa10.62□□□□□ -0.71
CDK3-201ENST00000425876 CD7P09564 240 aa10.62□□□□□ -0.71
CDK3-201ENST00000425876 JOSD1Q15040 202 aaPredicted RBP10.62□□□□□ -0.71
CDK3-201ENST00000425876 ZNF124Q15973 351 aa10.62□□□□□ -0.71
CDK3-201ENST00000425876 PRELID3AQ96N28 172 aa10.62□□□□□ -0.71
CDK3-201ENST00000425876 MDFIQ99750 246 aa10.62□□□□□ -0.71
CDK3-201ENST00000425876 IGHV3-16A0A0C4DH30 117 aa10.61□□□□□ -0.71
CDK3-201ENST00000425876 HSBP1O75506 76 aa10.61□□□□□ -0.71
CDK3-201ENST00000425876 EVI2AP22794 236 aa10.61□□□□□ -0.71
CDK3-201ENST00000425876 CKS2P33552 79 aa10.61□□□□□ -0.71
CDK3-201ENST00000425876 AMTP48728 403 aa10.61□□□□□ -0.71
CDK3-201ENST00000425876 KRTAP24-1Q3LI83 254 aa10.61□□□□□ -0.71
CDK3-201ENST00000425876 URB1-AS1Q96HZ7 61 aa10.61□□□□□ -0.71
CDK3-201ENST00000425876 TRGV11A0A075B6L2 103 aa10.6□□□□□ -0.71
CDK3-201ENST00000425876 LINC00614P0C842 121 aa10.6□□□□□ -0.71
CDK3-201ENST00000425876 INSL3P51460 131 aa10.6□□□□□ -0.71
CDK3-201ENST00000425876 RNASEKQ6P5S7 137 aaKnown RBP10.6□□□□□ -0.71
CDK3-201ENST00000425876 STHQ8IWL8 128 aa10.6□□□□□ -0.71
CDK3-201ENST00000425876 C9orf85Q96MD7 179 aa10.6□□□□□ -0.71
CDK3-201ENST00000425876 LINC00467Q9BRT7 94 aa10.6□□□□□ -0.71
CDK3-201ENST00000425876 TIMM8BQ9Y5J9 83 aaPredicted RBP10.6□□□□□ -0.71
CDK3-201ENST00000425876 COL6A5A8TX70 2615 aa10.6□□□□□ -0.71
CDK3-201ENST00000425876 PMCHP20382 165 aa10.6□□□□□ -0.71
CDK3-201ENST00000425876 TRPT1Q86TN4 253 aaKnown RBP10.6□□□□□ -0.71
CDK3-201ENST00000425876 Q8N1Y9 231 aa10.6□□□□□ -0.71
CDK3-201ENST00000425876 M0R381 172 aa10.59□□□□□ -0.71
CDK3-201ENST00000425876 MRAP2Q96G30 205 aa10.59□□□□□ -0.71
CDK3-201ENST00000425876 AP1S3Q96PC3 154 aa10.59□□□□□ -0.71
CDK3-201ENST00000425876 DPH3P1Q9H4G8 78 aa10.59□□□□□ -0.71
CDK3-201ENST00000425876 RBMY1A1P0DJD3 496 aaKnown RBP10.58□□□□□ -0.72
CDK3-201ENST00000425876 RBMY1CP0DJD4 496 aa10.58□□□□□ -0.72
CDK3-201ENST00000425876 FXYD7P58549 80 aa10.58□□□□□ -0.72
CDK3-201ENST00000425876 RBMY1FQ15415 496 aaKnown RBP10.58□□□□□ -0.72
CDK3-201ENST00000425876 Q6ZWC4 215 aa10.58□□□□□ -0.72
CDK3-201ENST00000425876 C19orf73Q9NVV2 129 aa10.58□□□□□ -0.72
CDK3-201ENST00000425876 STAB1Q9NY15 2570 aa10.58□□□□□ -0.72
CDK3-201ENST00000425876 NPYP01303 97 aa10.57□□□□□ -0.72
CDK3-201ENST00000425876 INSP01308 110 aa10.57□□□□□ -0.72
CDK3-201ENST00000425876 NUTF2P61970 127 aaKnown RBP10.57□□□□□ -0.72
CDK3-201ENST00000425876 DEFB125Q8N687 156 aa10.57□□□□□ -0.72
CDK3-201ENST00000425876 POM121L12Q8N7R1 296 aa10.57□□□□□ -0.72
CDK3-201ENST00000425876 PRSS3P2Q8NHM4 247 aa10.57□□□□□ -0.72
CDK3-201ENST00000425876 NIT2Q9NQR4 276 aa10.57□□□□□ -0.72
CDK3-201ENST00000425876 AP5S1Q9NUS5 200 aa10.57□□□□□ -0.72
CDK3-201ENST00000425876 SMKR1H3BMG3 65 aa10.56□□□□□ -0.72
CDK3-201ENST00000425876 C9orf66Q5T8R8 295 aa10.56□□□□□ -0.72
CDK3-201ENST00000425876 FA2HQ7L5A8 372 aa10.56□□□□□ -0.72
CDK3-201ENST00000425876 FAM19A2Q8N3H0 131 aa10.56□□□□□ -0.72
CDK3-201ENST00000425876 SYT8Q8NBV8 401 aa10.56□□□□□ -0.72
CDK3-201ENST00000425876 TMEM158Q8WZ71 300 aa10.56□□□□□ -0.72
CDK3-201ENST00000425876 GSN-AS1Q9NRJ2 163 aa10.56□□□□□ -0.72
CDK3-201ENST00000425876 MDFICQ9P1T7 246 aa10.56□□□□□ -0.72
CDK3-201ENST00000425876 CBY3A6NI87 242 aa10.56□□□□□ -0.72
CDK3-201ENST00000425876 PRSS47A8MTI9 375 aa10.56□□□□□ -0.72
CDK3-201ENST00000425876 TNFRSF6BO95407 300 aa10.56□□□□□ -0.72
CDK3-201ENST00000425876 NCR2O95944 276 aa10.56□□□□□ -0.72
CDK3-201ENST00000425876 SPATA3Q8NHX4 192 aa10.56□□□□□ -0.72
CDK3-201ENST00000425876 MAP1LC3AQ9H492 121 aa10.56□□□□□ -0.72
CDK3-201ENST00000425876 KIF25-AS1Q9Y6Z4 181 aa10.56□□□□□ -0.72
CDK3-201ENST00000425876 MUC4Q99102 2169 aa10.55□□□□□ -0.72
CDK3-201ENST00000425876 SPRY2O43597 315 aa10.55□□□□□ -0.72
CDK3-201ENST00000425876 IFI27P40305 119 aaPredicted RBP10.55□□□□□ -0.72
CDK3-201ENST00000425876 C14orf178Q8N769 122 aaPredicted RBP10.55□□□□□ -0.72
CDK3-201ENST00000425876 TENM1Q9UKZ4 2725 aa10.54□□□□□ -0.72
CDK3-201ENST00000425876 IGHV1-24A0A0C4DH33 117 aa10.54□□□□□ -0.72
CDK3-201ENST00000425876 LINC01546A6NGU7 62 aa10.54□□□□□ -0.72
CDK3-201ENST00000425876 PIK3CD-AS1Q5SR53 167 aa10.54□□□□□ -0.72
CDK3-201ENST00000425876 NRACQ8N912 160 aa10.54□□□□□ -0.72
CDK3-201ENST00000425876 PTH2Q96A98 100 aa10.54□□□□□ -0.72
CDK3-201ENST00000425876 NXT2Q9NPJ8 142 aaKnown RBP10.54□□□□□ -0.72
CDK3-201ENST00000425876 GAS8-AS1O95177 125 aa10.53□□□□□ -0.72
CDK3-201ENST00000425876 SMIM17P0DL12 118 aa10.53□□□□□ -0.72
CDK3-201ENST00000425876 LINC00315P59091 139 aa10.53□□□□□ -0.72
CDK3-201ENST00000425876 LINC01587Q99440 93 aa10.53□□□□□ -0.72
CDK3-201ENST00000425876 MCRIP2Q9BUT9 160 aaKnown RBP10.53□□□□□ -0.72
CDK3-201ENST00000425876 LOC389332A0A1B0GUA5 103 aa10.52□□□□□ -0.72
CDK3-201ENST00000425876 PPP1R17O96001 155 aa10.52□□□□□ -0.72
CDK3-201ENST00000425876 ZNF415Q09FC8 603 aa10.52□□□□□ -0.72
CDK3-201ENST00000425876 WFDC9Q8NEX5 89 aa10.52□□□□□ -0.72
CDK3-201ENST00000425876 XCL2Q9UBD3 114 aa10.52□□□□□ -0.72
CDK3-201ENST00000425876 SCGB1D1O95968 90 aa10.52□□□□□ -0.73
CDK3-201ENST00000425876 GATA1P15976 413 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms