RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 NANOS2P60321 138 aaKnown RBP17.16■□□□□ 0.34
APOE-202ENST00000425718 RPL19P84098 196 aaKnown RBP17.16■□□□□ 0.34
APOE-202ENST00000425718 MUC7Q8TAX7 377 aa17.16■□□□□ 0.34
APOE-202ENST00000425718 SEC11CQ9BY50 192 aa17.16■□□□□ 0.34
APOE-202ENST00000425718 TRAV10A0A0B4J240 114 aa17.15■□□□□ 0.34
APOE-202ENST00000425718 GRIFINA4D1Z8 144 aa17.15■□□□□ 0.34
APOE-202ENST00000425718 OR5AL1P0C617 328 aa17.15■□□□□ 0.34
APOE-202ENST00000425718 ARMS2P0C7Q2 107 aa17.15■□□□□ 0.34
APOE-202ENST00000425718 NDUFA5Q16718 116 aa17.15■□□□□ 0.34
APOE-202ENST00000425718 Q6ZTI0 123 aa17.15■□□□□ 0.34
APOE-202ENST00000425718 SFRP2Q96HF1 295 aa17.15■□□□□ 0.34
APOE-202ENST00000425718 GAGE12BA1L429 117 aa17.14■□□□□ 0.33
APOE-202ENST00000425718 F2Z2F3 143 aa17.14■□□□□ 0.33
APOE-202ENST00000425718 CIDEAO60543 219 aa17.14■□□□□ 0.33
APOE-202ENST00000425718 GAGE7O76087 117 aa17.14■□□□□ 0.33
APOE-202ENST00000425718 ATP5G1P05496 136 aa17.14■□□□□ 0.33
APOE-202ENST00000425718 GAGE12FP0CL80 117 aa17.14■□□□□ 0.33
APOE-202ENST00000425718 GAGE12GP0CL81 117 aa17.14■□□□□ 0.33
APOE-202ENST00000425718 GAGE12IP0CL82 117 aa17.14■□□□□ 0.33
APOE-202ENST00000425718 ZFP82Q8N141 532 aa17.14■□□□□ 0.33
APOE-202ENST00000425718 SCRT2Q9NQ03 307 aa17.14■□□□□ 0.33
APOE-202ENST00000425718 NUPR2A6NF83 97 aa17.13■□□□□ 0.33
APOE-202ENST00000425718 SNAI2O43623 268 aa17.13■□□□□ 0.33
APOE-202ENST00000425718 ZNF876PQ49A33 203 aa17.13■□□□□ 0.33
APOE-202ENST00000425718 FER1L6-AS1Q8NA97 138 aa17.13■□□□□ 0.33
APOE-202ENST00000425718 OR10G8Q8NGN5 311 aa17.13■□□□□ 0.33
APOE-202ENST00000425718 FAM231BA6NCW3 169 aa17.12■□□□□ 0.33
APOE-202ENST00000425718 C3orf84H3BNL1 204 aa17.12■□□□□ 0.33
APOE-202ENST00000425718 PPP1R2P9O14990 202 aa17.12■□□□□ 0.33
APOE-202ENST00000425718 Q6ZTC4 211 aa17.12■□□□□ 0.33
APOE-202ENST00000425718 SSBP4Q9BWG4 385 aaPredicted RBP17.12■□□□□ 0.33
APOE-202ENST00000425718 MRPL16Q9NX20 251 aaKnown RBP17.12■□□□□ 0.33
APOE-202ENST00000425718 CACNG7P62955 275 aa17.11■□□□□ 0.33
APOE-202ENST00000425718 PHLDA1Q8WV24 401 aaPredicted RBP17.11■□□□□ 0.33
APOE-202ENST00000425718 GFRA4Q9GZZ7 299 aa17.11■□□□□ 0.33
APOE-202ENST00000425718 DNAH7Q8WXX0 4024 aa17.11■□□□□ 0.33
APOE-202ENST00000425718 TRAV4A0A0B4J268 109 aa17.1■□□□□ 0.33
APOE-202ENST00000425718 A8MWV9 139 aa17.1■□□□□ 0.33
APOE-202ENST00000425718 KLK5Q9Y337 293 aaPredicted RBP17.1■□□□□ 0.33
APOE-202ENST00000425718 DEFB131BA0A096LNP1 70 aa17.09■□□□□ 0.33
APOE-202ENST00000425718 IGLC6P0CF74 106 aa17.09■□□□□ 0.33
APOE-202ENST00000425718 SLAQ13239 276 aa17.09■□□□□ 0.33
APOE-202ENST00000425718 WDR73Q6P4I2 378 aa17.09■□□□□ 0.33
APOE-202ENST00000425718 ZNF575Q86XF7 245 aa17.09■□□□□ 0.33
APOE-202ENST00000425718 TSKUQ8WUA8 353 aa17.09■□□□□ 0.33
APOE-202ENST00000425718 FAM210BQ96KR6 192 aa17.09■□□□□ 0.33
APOE-202ENST00000425718 MT-ND4LP03901 98 aa17.08■□□□□ 0.32
APOE-202ENST00000425718 SPANXN1Q5VSR9 72 aa17.08■□□□□ 0.32
APOE-202ENST00000425718 ANAPC16Q96DE5 110 aa17.08■□□□□ 0.32
APOE-202ENST00000425718 OR4C5Q8NGB2 326 aa17.07■□□□□ 0.32
APOE-202ENST00000425718 BORCS7Q96B45 105 aa17.07■□□□□ 0.32
APOE-202ENST00000425718 TPPP3Q9BW30 176 aa17.07■□□□□ 0.32
APOE-202ENST00000425718 V9GYV3 84 aa17.07■□□□□ 0.32
APOE-202ENST00000425718 NACAE9PAV3 2078 aa17.07■□□□□ 0.32
APOE-202ENST00000425718 NXPH4O95158 308 aa17.06■□□□□ 0.32
APOE-202ENST00000425718 GZMBP10144 247 aa17.06■□□□□ 0.32
APOE-202ENST00000425718 CTRLP40313 264 aa17.06■□□□□ 0.32
APOE-202ENST00000425718 C10orf91Q5T1B1 145 aa17.06■□□□□ 0.32
APOE-202ENST00000425718 CEMP1Q6PRD7 247 aaPredicted RBP17.06■□□□□ 0.32
APOE-202ENST00000425718 CARHSP1Q9Y2V2 147 aaKnown RBP17.06■□□□□ 0.32
APOE-202ENST00000425718 M0R381 172 aa17.05■□□□□ 0.32
APOE-202ENST00000425718 RHODO00212 210 aa17.05■□□□□ 0.32
APOE-202ENST00000425718 ADCYAP1P18509 176 aa17.05■□□□□ 0.32
APOE-202ENST00000425718 FOXA3P55318 350 aaPredicted RBP17.05■□□□□ 0.32
APOE-202ENST00000425718 TCTAP57738 103 aa17.05■□□□□ 0.32
APOE-202ENST00000425718 F5H768 121 aa17.04■□□□□ 0.32
APOE-202ENST00000425718 RS1O15537 224 aa17.04■□□□□ 0.32
APOE-202ENST00000425718 HTN3P15516 51 aa17.04■□□□□ 0.32
APOE-202ENST00000425718 DMRTA1Q5VZB9 504 aa17.04■□□□□ 0.32
APOE-202ENST00000425718 IGHV4-4A0A075B6R2 117 aa17.03■□□□□ 0.32
APOE-202ENST00000425718 LYZL1Q6UWQ5 148 aa17.03■□□□□ 0.32
APOE-202ENST00000425718 ZFP2Q6ZN57 461 aa17.03■□□□□ 0.32
APOE-202ENST00000425718 OR10AG1Q8NH19 301 aa17.03■□□□□ 0.32
APOE-202ENST00000425718 CNFNQ9BYD5 112 aa17.03■□□□□ 0.32
APOE-202ENST00000425718 TRGV4A0A0C4DH28 118 aa17.02■□□□□ 0.32
APOE-202ENST00000425718 TRGC1P0CF51 173 aa17.02■□□□□ 0.32
APOE-202ENST00000425718 AP1S3Q96PC3 154 aa17.02■□□□□ 0.32
APOE-202ENST00000425718 NAT8BQ9UHF3 227 aa17.02■□□□□ 0.32
APOE-202ENST00000425718 RNF212Q495C1 297 aa17.01■□□□□ 0.31
APOE-202ENST00000425718 CFAP126Q5VTH2 177 aa17.01■□□□□ 0.31
APOE-202ENST00000425718 CTDSP1Q9GZU7 261 aa17.01■□□□□ 0.31
APOE-202ENST00000425718 HIGD1CA8MV81 97 aa17■□□□□ 0.31
APOE-202ENST00000425718 SMIM17P0DL12 118 aa17■□□□□ 0.31
APOE-202ENST00000425718 GTSF1Q8WW33 167 aa17■□□□□ 0.31
APOE-202ENST00000425718 SMIM27A0A1W2PRY6 76 aa16.99■□□□□ 0.31
APOE-202ENST00000425718 SMIM15Q7Z3B0 74 aa16.99■□□□□ 0.31
APOE-202ENST00000425718 C15orf53Q8NAA6 179 aa16.99■□□□□ 0.31
APOE-202ENST00000425718 PRO0255Q9UI72 69 aa16.99■□□□□ 0.31
APOE-202ENST00000425718 H3BNG1 76 aa16.98■□□□□ 0.31
APOE-202ENST00000425718 IGHV3-53P01767 116 aa16.98■□□□□ 0.31
APOE-202ENST00000425718 RHEBQ15382 184 aa16.98■□□□□ 0.31
APOE-202ENST00000425718 ZFAND6Q6FIF0 208 aa16.98■□□□□ 0.31
APOE-202ENST00000425718 SVBPQ8N300 66 aa16.98■□□□□ 0.31
APOE-202ENST00000425718 POM121L12Q8N7R1 296 aa16.98■□□□□ 0.31
APOE-202ENST00000425718 ZNF479Q96JC4 524 aa16.98■□□□□ 0.31
APOE-202ENST00000425718 PGLYRP4Q96LB8 373 aa16.98■□□□□ 0.31
APOE-202ENST00000425718 A0A1B0GUT8 65 aa16.97■□□□□ 0.31
APOE-202ENST00000425718 IGLL5B9A064 214 aa16.96■□□□□ 0.31
APOE-202ENST00000425718 SNAPINO95295 136 aa16.96■□□□□ 0.31
APOE-202ENST00000425718 NTF3P20783 257 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms