RNA–Protein interactions for RNA: ENST00000425537.1

HMGB4-201, Transcript of high mobility group box 4, humanhuman

TSL 1 (best)

Gene HMGB4, Length 630 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-201ENST00000425537 NUPR1O60356 82 aa7.03□□□□□ -1.28
HMGB4-201ENST00000425537 SAP30O75446 220 aa7.03□□□□□ -1.28
HMGB4-201ENST00000425537 CD7P09564 240 aa7.03□□□□□ -1.28
HMGB4-201ENST00000425537 SMIM17P0DL12 118 aa7.03□□□□□ -1.28
HMGB4-201ENST00000425537 LINC00310P59036 64 aa7.03□□□□□ -1.28
HMGB4-201ENST00000425537 DEFB1P60022 68 aa7.03□□□□□ -1.28
HMGB4-201ENST00000425537 SSTP61278 116 aa7.03□□□□□ -1.28
HMGB4-201ENST00000425537 NSUN5P1Q3KNT7 163 aa7.03□□□□□ -1.28
HMGB4-201ENST00000425537 MUC21Q5SSG8 566 aa7.03□□□□□ -1.28
HMGB4-201ENST00000425537 OR10AG1Q8NH19 301 aa7.03□□□□□ -1.28
HMGB4-201ENST00000425537 RCHY1Q96PM5 261 aa7.03□□□□□ -1.28
HMGB4-201ENST00000425537 DPH3P1Q9H4G8 78 aa7.03□□□□□ -1.28
HMGB4-201ENST00000425537 NXT2Q9NPJ8 142 aaKnown RBP7.03□□□□□ -1.28
HMGB4-201ENST00000425537 SCRT2Q9NQ03 307 aa7.03□□□□□ -1.28
HMGB4-201ENST00000425537 AP5S1Q9NUS5 200 aa7.03□□□□□ -1.28
HMGB4-201ENST00000425537 MUC21A0A0G2JKD1 596 aa7.02□□□□□ -1.29
HMGB4-201ENST00000425537 MUC21A0A140T8X8 626 aa7.02□□□□□ -1.29
HMGB4-201ENST00000425537 NXPH4O95158 308 aa7.02□□□□□ -1.29
HMGB4-201ENST00000425537 IGKV3-20P01619 116 aa7.02□□□□□ -1.29
HMGB4-201ENST00000425537 SPINK13Q1W4C9 94 aa7.02□□□□□ -1.29
HMGB4-201ENST00000425537 AMTNQ6UX39 209 aa7.02□□□□□ -1.29
HMGB4-201ENST00000425537 ZNF575Q86XF7 245 aa7.02□□□□□ -1.29
HMGB4-201ENST00000425537 STHQ8IWL8 128 aa7.02□□□□□ -1.29
HMGB4-201ENST00000425537 HSPB8Q9UJY1 196 aa7.02□□□□□ -1.29
HMGB4-201ENST00000425537 TIMM8BQ9Y5J9 83 aaPredicted RBP7.02□□□□□ -1.29
HMGB4-201ENST00000425537 C20orf202A1L168 122 aa7.01□□□□□ -1.29
HMGB4-201ENST00000425537 KNCNA6PVL3 124 aa7.01□□□□□ -1.29
HMGB4-201ENST00000425537 TSTD3H0UI37 97 aa7.01□□□□□ -1.29
HMGB4-201ENST00000425537 M0R381 172 aa7.01□□□□□ -1.29
HMGB4-201ENST00000425537 INSP01308 110 aa7.01□□□□□ -1.29
HMGB4-201ENST00000425537 INSL3P51460 131 aa7.01□□□□□ -1.29
HMGB4-201ENST00000425537 LINC00467Q9BRT7 94 aa7.01□□□□□ -1.29
HMGB4-201ENST00000425537 MSRB1Q9NZV6 116 aa7.01□□□□□ -1.29
HMGB4-201ENST00000425537 ZNF256Q9Y2P7 627 aaPredicted RBP7.01□□□□□ -1.29
HMGB4-201ENST00000425537 CBY3A6NI87 242 aa7□□□□□ -1.29
HMGB4-201ENST00000425537 GNRH2O43555 120 aa7□□□□□ -1.29
HMGB4-201ENST00000425537 LEPROTL1O95214 131 aa7□□□□□ -1.29
HMGB4-201ENST00000425537 TNFRSF6BO95407 300 aa7□□□□□ -1.29
HMGB4-201ENST00000425537 IGLV1-51P01701 117 aa7□□□□□ -1.29
HMGB4-201ENST00000425537 RNASE3P12724 160 aaKnown RBP7□□□□□ -1.29
HMGB4-201ENST00000425537 BTF3P20290 206 aaKnown RBP7□□□□□ -1.29
HMGB4-201ENST00000425537 EVI2AP22794 236 aa7□□□□□ -1.29
HMGB4-201ENST00000425537 KRTDAPP60985 99 aa7□□□□□ -1.29
HMGB4-201ENST00000425537 PMCHL1Q16048 86 aa7□□□□□ -1.29
HMGB4-201ENST00000425537 Q6ZWC4 215 aa7□□□□□ -1.29
HMGB4-201ENST00000425537 FAM19A2Q8N3H0 131 aa7□□□□□ -1.29
HMGB4-201ENST00000425537 RNF185Q96GF1 192 aa7□□□□□ -1.29
HMGB4-201ENST00000425537 GSN-AS1Q9NRJ2 163 aa7□□□□□ -1.29
HMGB4-201ENST00000425537 IGHV3-16A0A0C4DH30 117 aa6.99□□□□□ -1.29
HMGB4-201ENST00000425537 IGHV1-24A0A0C4DH33 117 aa6.99□□□□□ -1.29
HMGB4-201ENST00000425537 PCP4L1A6NKN8 68 aa6.99□□□□□ -1.29
HMGB4-201ENST00000425537 PRSS47A8MTI9 375 aa6.99□□□□□ -1.29
HMGB4-201ENST00000425537 ADARB2-AS1A8MUL3 147 aa6.99□□□□□ -1.29
HMGB4-201ENST00000425537 K7EMI3 77 aa6.99□□□□□ -1.29
HMGB4-201ENST00000425537 G0S2P27469 103 aa6.99□□□□□ -1.29
HMGB4-201ENST00000425537 PKIAP61925 76 aa6.99□□□□□ -1.29
HMGB4-201ENST00000425537 ZNF415Q09FC8 603 aa6.99□□□□□ -1.29
HMGB4-201ENST00000425537 PIK3CD-AS1Q5SR53 167 aa6.99□□□□□ -1.29
HMGB4-201ENST00000425537 DEFB125Q8N687 156 aa6.99□□□□□ -1.29
HMGB4-201ENST00000425537 TMEM158Q8WZ71 300 aa6.99□□□□□ -1.29
HMGB4-201ENST00000425537 C9orf85Q96MD7 179 aa6.99□□□□□ -1.29
HMGB4-201ENST00000425537 C20orf78Q9BR46 151 aa6.99□□□□□ -1.29
HMGB4-201ENST00000425537 TMEM70Q9BUB7 260 aa6.99□□□□□ -1.29
HMGB4-201ENST00000425537 C1QTNF4Q9BXJ3 329 aa6.99□□□□□ -1.29
HMGB4-201ENST00000425537 MAP1LC3CQ9BXW4 147 aa6.99□□□□□ -1.29
HMGB4-201ENST00000425537 FBN1P35555 2871 aaKnown RBP6.99□□□□□ -1.29
HMGB4-201ENST00000425537 TRAV12-2A0A075B6T6 113 aa6.98□□□□□ -1.29
HMGB4-201ENST00000425537 NPYP01303 97 aa6.98□□□□□ -1.29
HMGB4-201ENST00000425537 HBDP02042 147 aa6.98□□□□□ -1.29
HMGB4-201ENST00000425537 KIR3DS1Q14943 382 aa6.98□□□□□ -1.29
HMGB4-201ENST00000425537 ODF3L2Q3SX64 289 aa6.98□□□□□ -1.29
HMGB4-201ENST00000425537 C9orf66Q5T8R8 295 aa6.98□□□□□ -1.29
HMGB4-201ENST00000425537 Q6ZQT7 251 aa6.98□□□□□ -1.29
HMGB4-201ENST00000425537 Q8N1Y9 231 aa6.98□□□□□ -1.29
HMGB4-201ENST00000425537 Q8N8P6 123 aa6.98□□□□□ -1.29
HMGB4-201ENST00000425537 PTH2Q96A98 100 aa6.98□□□□□ -1.29
HMGB4-201ENST00000425537 SPXQ9BT56 116 aa6.98□□□□□ -1.29
HMGB4-201ENST00000425537 NDUFAF3Q9BU61 184 aa6.98□□□□□ -1.29
HMGB4-201ENST00000425537 MCRIP2Q9BUT9 160 aaKnown RBP6.98□□□□□ -1.29
HMGB4-201ENST00000425537 LOC389332A0A1B0GUA5 103 aa6.97□□□□□ -1.29
HMGB4-201ENST00000425537 LINC01546A6NGU7 62 aa6.97□□□□□ -1.29
HMGB4-201ENST00000425537 LINC01549A6NIU2 74 aa6.97□□□□□ -1.29
HMGB4-201ENST00000425537 NCR2O95944 276 aa6.97□□□□□ -1.29
HMGB4-201ENST00000425537 MGPP08493 103 aa6.97□□□□□ -1.29
HMGB4-201ENST00000425537 C3orf79P0CE67 100 aa6.97□□□□□ -1.29
HMGB4-201ENST00000425537 IFI27P40305 119 aaPredicted RBP6.97□□□□□ -1.29
HMGB4-201ENST00000425537 KRTAP10-3P60369 221 aa6.97□□□□□ -1.29
HMGB4-201ENST00000425537 BEAN1Q3B7T3 259 aa6.97□□□□□ -1.29
HMGB4-201ENST00000425537 MORN3Q6PF18 240 aaPredicted RBP6.97□□□□□ -1.29
HMGB4-201ENST00000425537 PET117Q6UWS5 81 aa6.97□□□□□ -1.29
HMGB4-201ENST00000425537 TRPT1Q86TN4 253 aaKnown RBP6.97□□□□□ -1.29
HMGB4-201ENST00000425537 LINC00482Q8N8I6 264 aa6.97□□□□□ -1.29
HMGB4-201ENST00000425537 URB1-AS1Q96HZ7 61 aa6.97□□□□□ -1.29
HMGB4-201ENST00000425537 TMEM208Q9BTX3 173 aa6.97□□□□□ -1.29
HMGB4-201ENST00000425537 VAMP8Q9BV40 100 aa6.97□□□□□ -1.29
HMGB4-201ENST00000425537 SMKR1H3BMG3 65 aa6.96□□□□□ -1.3
HMGB4-201ENST00000425537 H7C1H1 209 aa6.96□□□□□ -1.3
HMGB4-201ENST00000425537 TCAPO15273 167 aa6.96□□□□□ -1.3
HMGB4-201ENST00000425537 PRR31Q5SQ13 230 aa6.96□□□□□ -1.3
HMGB4-201ENST00000425537 C12orf54Q6X4T0 127 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms