RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 TRRAPQ9Y4A5 3859 aa8.96□□□□□ -0.97
PTPRN-204ENST00000423636 TMEM8BA6NDV4 472 aa8.96□□□□□ -0.97
PTPRN-204ENST00000423636 HBDP02042 147 aa8.96□□□□□ -0.97
PTPRN-204ENST00000423636 LINC01559Q495D7 138 aa8.96□□□□□ -0.97
PTPRN-204ENST00000423636 ZNF493Q6ZR52 646 aa8.96□□□□□ -0.97
PTPRN-204ENST00000423636 SMR3AQ99954 134 aa8.96□□□□□ -0.97
PTPRN-204ENST00000423636 IGLV1-40P01703 118 aa8.96□□□□□ -0.98
PTPRN-204ENST00000423636 HOXD3P31249 432 aaPredicted RBP8.96□□□□□ -0.98
PTPRN-204ENST00000423636 Q6AWC8 147 aa8.96□□□□□ -0.98
PTPRN-204ENST00000423636 IGHV3OR16-12A0A075B7B8 117 aa8.95□□□□□ -0.98
PTPRN-204ENST00000423636 PSMB8P28062 276 aa8.95□□□□□ -0.98
PTPRN-204ENST00000423636 SLC25A34Q6PIV7 304 aa8.95□□□□□ -0.98
PTPRN-204ENST00000423636 APRG1Q8IVJ8 170 aa8.95□□□□□ -0.98
PTPRN-204ENST00000423636 IGKV2D-26A0A0A0MRZ7 120 aa8.95□□□□□ -0.98
PTPRN-204ENST00000423636 C9orf47Q6ZRZ4 202 aa8.95□□□□□ -0.98
PTPRN-204ENST00000423636 C9orf139Q6ZV77 190 aa8.95□□□□□ -0.98
PTPRN-204ENST00000423636 A0A0G2JLM5 398 aa8.95□□□□□ -0.98
PTPRN-204ENST00000423636 COL5A1-AS1Q5SY13 56 aa8.95□□□□□ -0.98
PTPRN-204ENST00000423636 A0A096LNT2 108 aa8.94□□□□□ -0.98
PTPRN-204ENST00000423636 SOCS3O14543 225 aa8.94□□□□□ -0.98
PTPRN-204ENST00000423636 SMIM15Q7Z3B0 74 aa8.94□□□□□ -0.98
PTPRN-204ENST00000423636 USMG5Q96IX5 58 aa8.94□□□□□ -0.98
PTPRN-204ENST00000423636 RPS20P60866 119 aaKnown RBP8.93□□□□□ -0.98
PTPRN-204ENST00000423636 OR11H1Q8NG94 326 aa8.93□□□□□ -0.98
PTPRN-204ENST00000423636 PSMG3-AS1Q96PY0 264 aa8.93□□□□□ -0.98
PTPRN-204ENST00000423636 ZNF256Q9Y2P7 627 aaPredicted RBP8.93□□□□□ -0.98
PTPRN-204ENST00000423636 TRAV8-6A0A0B4J262 113 aa8.93□□□□□ -0.98
PTPRN-204ENST00000423636 SMIM17P0DL12 118 aa8.93□□□□□ -0.98
PTPRN-204ENST00000423636 CD5LO43866 347 aa8.93□□□□□ -0.98
PTPRN-204ENST00000423636 ASIPP42127 132 aa8.93□□□□□ -0.98
PTPRN-204ENST00000423636 DEFB113Q30KQ7 82 aa8.93□□□□□ -0.98
PTPRN-204ENST00000423636 TCTEX1D4Q5JR98 221 aa8.93□□□□□ -0.98
PTPRN-204ENST00000423636 LINC01545Q5VT33 79 aa8.93□□□□□ -0.98
PTPRN-204ENST00000423636 Q9UF83 564 aa8.93□□□□□ -0.98
PTPRN-204ENST00000423636 RNASE3P12724 160 aaKnown RBP8.92□□□□□ -0.98
PTPRN-204ENST00000423636 PROK1P58294 105 aa8.92□□□□□ -0.98
PTPRN-204ENST00000423636 FAM159AQ6UWV7 190 aa8.92□□□□□ -0.98
PTPRN-204ENST00000423636 DCANP1Q8TF63 244 aa8.92□□□□□ -0.98
PTPRN-204ENST00000423636 VPREB3Q9UKI3 123 aa8.92□□□□□ -0.98
PTPRN-204ENST00000423636 VAMP3Q15836 100 aa8.92□□□□□ -0.98
PTPRN-204ENST00000423636 PET117Q6UWS5 81 aa8.92□□□□□ -0.98
PTPRN-204ENST00000423636 ZNF702PQ9H963 129 aa8.92□□□□□ -0.98
PTPRN-204ENST00000423636 SCRT2Q9NQ03 307 aa8.92□□□□□ -0.98
PTPRN-204ENST00000423636 TRAV21A0A0B4J279 112 aa8.92□□□□□ -0.98
PTPRN-204ENST00000423636 P0DMU3 169 aa8.92□□□□□ -0.98
PTPRN-204ENST00000423636 FAM231AP0DMU4 169 aa8.92□□□□□ -0.98
PTPRN-204ENST00000423636 FAM231CP0DMU5 169 aa8.92□□□□□ -0.98
PTPRN-204ENST00000423636 SLC25A16P16260 332 aa8.92□□□□□ -0.98
PTPRN-204ENST00000423636 PTTG1IPP53801 180 aa8.92□□□□□ -0.98
PTPRN-204ENST00000423636 DEFB131AP59861 70 aa8.92□□□□□ -0.98
PTPRN-204ENST00000423636 GATD1Q8NB37 220 aa8.92□□□□□ -0.98
PTPRN-204ENST00000423636 M0QZK8 103 aa8.91□□□□□ -0.98
PTPRN-204ENST00000423636 RPL39P62891 51 aaKnown RBP8.91□□□□□ -0.98
PTPRN-204ENST00000423636 CFHR3Q02985 330 aa8.91□□□□□ -0.98
PTPRN-204ENST00000423636 NRACQ8N912 160 aa8.91□□□□□ -0.98
PTPRN-204ENST00000423636 OPRPNQ99935 248 aaPredicted RBP8.91□□□□□ -0.98
PTPRN-204ENST00000423636 MRPL35Q9NZE8 188 aaKnown RBP8.91□□□□□ -0.98
PTPRN-204ENST00000423636 U3KQK5 164 aa8.91□□□□□ -0.98
PTPRN-204ENST00000423636 CRXO43186 299 aaPredicted RBP8.91□□□□□ -0.98
PTPRN-204ENST00000423636 CBY1Q9Y3M2 126 aa8.91□□□□□ -0.98
PTPRN-204ENST00000423636 FCER1GP30273 86 aa8.9□□□□□ -0.98
PTPRN-204ENST00000423636 KLHL30-AS1Q8NEE0 82 aa8.9□□□□□ -0.98
PTPRN-204ENST00000423636 RASL10AQ92737 203 aa8.9□□□□□ -0.98
PTPRN-204ENST00000423636 A0A1B0GW15 77 aa8.9□□□□□ -0.98
PTPRN-204ENST00000423636 RBAKDNA6NC62 111 aa8.9□□□□□ -0.98
PTPRN-204ENST00000423636 DLEU1O43261 78 aa8.9□□□□□ -0.98
PTPRN-204ENST00000423636 ADAMTSL5Q6ZMM2 481 aa8.9□□□□□ -0.98
PTPRN-204ENST00000423636 DPF1Q92782 380 aa8.9□□□□□ -0.98
PTPRN-204ENST00000423636 Q8N1Y9 231 aa8.9□□□□□ -0.99
PTPRN-204ENST00000423636 OVOL1O14753 267 aa8.89□□□□□ -0.99
PTPRN-204ENST00000423636 RNASE13Q5GAN3 156 aaKnown RBP8.89□□□□□ -0.99
PTPRN-204ENST00000423636 DLX4Q92988 240 aaPredicted RBP8.89□□□□□ -0.99
PTPRN-204ENST00000423636 CSTL1Q9H114 145 aa8.89□□□□□ -0.99
PTPRN-204ENST00000423636 IGHV3-16A0A0C4DH30 117 aa8.88□□□□□ -0.99
PTPRN-204ENST00000423636 CCL25O15444 150 aa8.88□□□□□ -0.99
PTPRN-204ENST00000423636 ZNF56Q15929 161 aa8.88□□□□□ -0.99
PTPRN-204ENST00000423636 LBHQ53QV2 105 aaPredicted RBP8.88□□□□□ -0.99
PTPRN-204ENST00000423636 SFTA2Q6UW10 78 aa8.88□□□□□ -0.99
PTPRN-204ENST00000423636 C2orf91Q6ZV80 131 aa8.88□□□□□ -0.99
PTPRN-204ENST00000423636 UBE2E2Q96LR5 201 aa8.88□□□□□ -0.99
PTPRN-204ENST00000423636 IGHV3-64A0A075B6Q5 118 aa8.88□□□□□ -0.99
PTPRN-204ENST00000423636 BVES-AS1Q5T3Y7 98 aa8.88□□□□□ -0.99
PTPRN-204ENST00000423636 Q6YL49 198 aa8.88□□□□□ -0.99
PTPRN-204ENST00000423636 TMEM61Q8N0U2 210 aa8.88□□□□□ -0.99
PTPRN-204ENST00000423636 ST20Q9HBF5 79 aa8.88□□□□□ -0.99
PTPRN-204ENST00000423636 K7ERJ3 54 aa8.88□□□□□ -0.99
PTPRN-204ENST00000423636 RBMY1A1P0DJD3 496 aaKnown RBP8.88□□□□□ -0.99
PTPRN-204ENST00000423636 RBMY1CP0DJD4 496 aa8.88□□□□□ -0.99
PTPRN-204ENST00000423636 RBMY1FQ15415 496 aaKnown RBP8.88□□□□□ -0.99
PTPRN-204ENST00000423636 COX8CQ7Z4L0 72 aa8.88□□□□□ -0.99
PTPRN-204ENST00000423636 LAGE3Q14657 143 aa8.87□□□□□ -0.99
PTPRN-204ENST00000423636 JMJD8Q96S16 334 aa8.87□□□□□ -0.99
PTPRN-204ENST00000423636 VPS25Q9BRG1 176 aa8.87□□□□□ -0.99
PTPRN-204ENST00000423636 HIVEP1P15822 2718 aa8.87□□□□□ -0.99
PTPRN-204ENST00000423636 GCSHP23434 173 aa8.87□□□□□ -0.99
PTPRN-204ENST00000423636 WFDC10AQ9H1F0 79 aa8.87□□□□□ -0.99
PTPRN-204ENST00000423636 DUSP14O95147 198 aaKnown RBP8.87□□□□□ -0.99
PTPRN-204ENST00000423636 ID1P41134 155 aa8.87□□□□□ -0.99
PTPRN-204ENST00000423636 ODF1Q14990 250 aa8.87□□□□□ -0.99
PTPRN-204ENST00000423636 AMMECR1LQ6DCA0 310 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms