RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 LELP1Q5T871 98 aa12.66□□□□□ -0.38
VARS2-202ENST00000421263 PRNTQ86SH4 94 aa12.66□□□□□ -0.38
VARS2-202ENST00000421263 MED28Q9H204 178 aa12.66□□□□□ -0.38
VARS2-202ENST00000421263 SH3BGRL3Q9H299 93 aa12.66□□□□□ -0.38
VARS2-202ENST00000421263 IGHV3-73A0A0B4J1V6 119 aa12.65□□□□□ -0.38
VARS2-202ENST00000421263 MGST1P10620 155 aaKnown RBP12.65□□□□□ -0.38
VARS2-202ENST00000421263 GTSF1LQ9H1H1 148 aa12.65□□□□□ -0.38
VARS2-202ENST00000421263 IGKV3D-20A0A0C4DH25 116 aa12.64□□□□□ -0.39
VARS2-202ENST00000421263 PTTG1O95997 202 aa12.64□□□□□ -0.39
VARS2-202ENST00000421263 ZFP69Q49AA0 526 aa12.64□□□□□ -0.39
VARS2-202ENST00000421263 OR10J3Q5JRS4 329 aa12.64□□□□□ -0.39
VARS2-202ENST00000421263 PIK3CD-AS1Q5SR53 167 aa12.64□□□□□ -0.39
VARS2-202ENST00000421263 Q6ZSN1 163 aa12.64□□□□□ -0.39
VARS2-202ENST00000421263 LINC00479Q96M42 142 aa12.64□□□□□ -0.39
VARS2-202ENST00000421263 INAFM2P0DMQ5 153 aa12.63□□□□□ -0.39
VARS2-202ENST00000421263 ZNF726P1Q15940 193 aa12.63□□□□□ -0.39
VARS2-202ENST00000421263 ZFP2Q6ZN57 461 aa12.63□□□□□ -0.39
VARS2-202ENST00000421263 ATP6V0E2Q8NHE4 81 aa12.63□□□□□ -0.39
VARS2-202ENST00000421263 NTN5Q8WTR8 489 aaPredicted RBP12.63□□□□□ -0.39
VARS2-202ENST00000421263 RNF222A6NCQ9 220 aa12.62□□□□□ -0.39
VARS2-202ENST00000421263 FABP5P3A8MUU1 101 aa12.62□□□□□ -0.39
VARS2-202ENST00000421263 PSCAO43653 123 aa12.62□□□□□ -0.39
VARS2-202ENST00000421263 GIPP09681 153 aaPredicted RBP12.62□□□□□ -0.39
VARS2-202ENST00000421263 Q5VSD8 79 aa12.62□□□□□ -0.39
VARS2-202ENST00000421263 RPL7L1Q6DKI1 246 aaKnown RBP12.62□□□□□ -0.39
VARS2-202ENST00000421263 PARLQ9H300 379 aa12.62□□□□□ -0.39
VARS2-202ENST00000421263 TRAV34A0A0B4J273 112 aa12.61□□□□□ -0.39
VARS2-202ENST00000421263 LINC00694P0DN24 101 aa12.61□□□□□ -0.39
VARS2-202ENST00000421263 FRZBQ92765 325 aa12.61□□□□□ -0.39
VARS2-202ENST00000421263 ARL2-SNX15V9GYD0 113 aa12.61□□□□□ -0.39
VARS2-202ENST00000421263 IGLV5-52A0A0A0MRZ9 124 aa12.6□□□□□ -0.39
VARS2-202ENST00000421263 A8MWV9 139 aa12.6□□□□□ -0.39
VARS2-202ENST00000421263 IGHV3-30P01768 117 aa12.6□□□□□ -0.39
VARS2-202ENST00000421263 IGHV3-33P01772 117 aa12.6□□□□□ -0.39
VARS2-202ENST00000421263 IGHV3-30-3P0DP02 117 aa12.6□□□□□ -0.39
VARS2-202ENST00000421263 IGHV3-30-5P0DP03 117 aa12.6□□□□□ -0.39
VARS2-202ENST00000421263 LAGE3Q14657 143 aa12.6□□□□□ -0.39
VARS2-202ENST00000421263 UFSP1Q6NVU6 142 aa12.6□□□□□ -0.39
VARS2-202ENST00000421263 Q8N814 137 aa12.6□□□□□ -0.39
VARS2-202ENST00000421263 INO80EQ8NBZ0 244 aaPredicted RBP12.6□□□□□ -0.39
VARS2-202ENST00000421263 TMEM70Q9BUB7 260 aa12.6□□□□□ -0.39
VARS2-202ENST00000421263 BORCS7-ASMTA0A0B4J1R7 106 aa12.59□□□□□ -0.39
VARS2-202ENST00000421263 CTXND1A0A1B0GTU2 59 aa12.59□□□□□ -0.39
VARS2-202ENST00000421263 DNLZQ5SXM8 178 aa12.59□□□□□ -0.39
VARS2-202ENST00000421263 COX8CQ7Z4L0 72 aa12.59□□□□□ -0.39
VARS2-202ENST00000421263 Q9HAA7 133 aa12.59□□□□□ -0.39
VARS2-202ENST00000421263 IL36BQ9NZH7 164 aa12.59□□□□□ -0.39
VARS2-202ENST00000421263 SMR3BP02814 79 aaPredicted RBP12.58□□□□□ -0.4
VARS2-202ENST00000421263 S100A4P26447 101 aaKnown RBP12.58□□□□□ -0.4
VARS2-202ENST00000421263 CRIP1P50238 77 aa12.58□□□□□ -0.4
VARS2-202ENST00000421263 NKX6-2Q9C056 277 aaPredicted RBP12.58□□□□□ -0.4
VARS2-202ENST00000421263 Q9UF83 564 aa12.58□□□□□ -0.4
VARS2-202ENST00000421263 SRRM2Q9UQ35 2752 aaKnown RBP12.58□□□□□ -0.4
VARS2-202ENST00000421263 MYCBP2O75592 4640 aa12.57□□□□□ -0.4
VARS2-202ENST00000421263 FAM74A7A6NL05 159 aa12.57□□□□□ -0.4
VARS2-202ENST00000421263 PEX7O00628 323 aa12.57□□□□□ -0.4
VARS2-202ENST00000421263 IFNA7P01567 189 aa12.57□□□□□ -0.4
VARS2-202ENST00000421263 ASIPP42127 132 aa12.57□□□□□ -0.4
VARS2-202ENST00000421263 LGALSLQ3ZCW2 172 aaPredicted RBP12.57□□□□□ -0.4
VARS2-202ENST00000421263 HIST1H2BAQ96A08 127 aa12.57□□□□□ -0.4
VARS2-202ENST00000421263 SAMD10Q9BYL1 202 aa12.57□□□□□ -0.4
VARS2-202ENST00000421263 JPT2Q9H910 190 aa12.57□□□□□ -0.4
VARS2-202ENST00000421263 GAGE12JA6NER3 117 aa12.56□□□□□ -0.4
VARS2-202ENST00000421263 UBE2G2P60604 165 aa12.56□□□□□ -0.4
VARS2-202ENST00000421263 GAGE1Q13065 139 aa12.56□□□□□ -0.4
VARS2-202ENST00000421263 GAGE4Q13068 117 aa12.56□□□□□ -0.4
VARS2-202ENST00000421263 GAGE5Q13069 117 aa12.56□□□□□ -0.4
VARS2-202ENST00000421263 GAGE13Q4V321 117 aa12.56□□□□□ -0.4
VARS2-202ENST00000421263 DMRTA1Q5VZB9 504 aa12.56□□□□□ -0.4
VARS2-202ENST00000421263 Q86TA4 180 aa12.56□□□□□ -0.4
VARS2-202ENST00000421263 TM2D2Q9BX73 214 aa12.56□□□□□ -0.4
VARS2-202ENST00000421263 FXYD6-FXYD2A0A087WZ82 144 aa12.55□□□□□ -0.4
VARS2-202ENST00000421263 KRBOX1C9JBD0 128 aa12.55□□□□□ -0.4
VARS2-202ENST00000421263 G3V3Q6 166 aa12.55□□□□□ -0.4
VARS2-202ENST00000421263 Q8N3U1 123 aa12.55□□□□□ -0.4
VARS2-202ENST00000421263 OR2T35Q8NGX2 323 aa12.55□□□□□ -0.4
VARS2-202ENST00000421263 ZC2HC1AQ96GY0 325 aa12.55□□□□□ -0.4
VARS2-202ENST00000421263 ZFP30Q9Y2G7 519 aa12.55□□□□□ -0.4
VARS2-202ENST00000421263 B4DEV8 164 aa12.54□□□□□ -0.4
VARS2-202ENST00000421263 C1QBP02746 253 aa12.54□□□□□ -0.4
VARS2-202ENST00000421263 ARMS2P0C7Q2 107 aa12.54□□□□□ -0.4
VARS2-202ENST00000421263 FGF8P55075 233 aaPredicted RBP12.54□□□□□ -0.4
VARS2-202ENST00000421263 C14orf178Q8N769 122 aaPredicted RBP12.54□□□□□ -0.4
VARS2-202ENST00000421263 FAM30AQ9NZY2 134 aa12.54□□□□□ -0.4
VARS2-202ENST00000421263 A0A087WWC5 75 aa12.53□□□□□ -0.4
VARS2-202ENST00000421263 TRAV8-3A0A0A6YYJ7 113 aa12.53□□□□□ -0.4
VARS2-202ENST00000421263 FAM229AH3BQW9 127 aa12.53□□□□□ -0.4
VARS2-202ENST00000421263 WFDC2Q14508 124 aa12.53□□□□□ -0.4
VARS2-202ENST00000421263 AKR1C8PQ5T2L2 129 aa12.53□□□□□ -0.4
VARS2-202ENST00000421263 CYTL1Q9NRR1 136 aa12.53□□□□□ -0.4
VARS2-202ENST00000421263 TRBV6-1A0A0K0K1D8 114 aa12.52□□□□□ -0.41
VARS2-202ENST00000421263 H3BVH4 76 aa12.52□□□□□ -0.41
VARS2-202ENST00000421263 SH2D1AO60880 128 aa12.52□□□□□ -0.41
VARS2-202ENST00000421263 HAMPP81172 84 aa12.52□□□□□ -0.41
VARS2-202ENST00000421263 DAZ4Q86SG3 579 aaKnown RBP12.52□□□□□ -0.41
VARS2-202ENST00000421263 SFRP2Q96HF1 295 aa12.52□□□□□ -0.41
VARS2-202ENST00000421263 DAZ3Q9NR90 486 aaKnown RBP12.52□□□□□ -0.41
VARS2-202ENST00000421263 DMBT1Q9UGM3 2413 aaPredicted RBP12.51□□□□□ -0.41
VARS2-202ENST00000421263 RHODO00212 210 aa12.51□□□□□ -0.41
VARS2-202ENST00000421263 ZNF674Q2M3X9 581 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms