RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 A0A096LNJ9 63 aa8.27□□□□□ -1.08
DDX56-203ENST00000421223 TRAV12-3A0A0B4J271 114 aa8.27□□□□□ -1.08
DDX56-203ENST00000421223 SAP30O75446 220 aa8.27□□□□□ -1.08
DDX56-203ENST00000421223 HBDP02042 147 aa8.27□□□□□ -1.08
DDX56-203ENST00000421223 PRSS1P07477 247 aa8.27□□□□□ -1.08
DDX56-203ENST00000421223 PSMB8P28062 276 aa8.27□□□□□ -1.08
DDX56-203ENST00000421223 DEFB113Q30KQ7 82 aa8.27□□□□□ -1.08
DDX56-203ENST00000421223 ZFAND2AQ8N6M9 145 aa8.27□□□□□ -1.08
DDX56-203ENST00000421223 ST20Q9HBF5 79 aa8.27□□□□□ -1.08
DDX56-203ENST00000421223 TRAV21A0A0B4J279 112 aa8.27□□□□□ -1.09
DDX56-203ENST00000421223 C18orf65Q6ZTR6 163 aa8.27□□□□□ -1.09
DDX56-203ENST00000421223 VPREB3Q9UKI3 123 aa8.27□□□□□ -1.09
DDX56-203ENST00000421223 MRPL53Q96EL3 112 aaKnown RBP8.27□□□□□ -1.09
DDX56-203ENST00000421223 SIVA1O15304 175 aa8.26□□□□□ -1.09
DDX56-203ENST00000421223 ORAOV1Q8WV07 137 aa8.26□□□□□ -1.09
DDX56-203ENST00000421223 IFI27L1Q96BM0 104 aa8.26□□□□□ -1.09
DDX56-203ENST00000421223 U3KQK5 164 aa8.26□□□□□ -1.09
DDX56-203ENST00000421223 HELZ2Q9BYK8 2649 aaKnown RBP8.26□□□□□ -1.09
DDX56-203ENST00000421223 IGHV4OR15-8A0A075B7B6 117 aa8.26□□□□□ -1.09
DDX56-203ENST00000421223 A0A087WW49 117 aa8.26□□□□□ -1.09
DDX56-203ENST00000421223 A0A096LNT2 108 aa8.26□□□□□ -1.09
DDX56-203ENST00000421223 ASIPP42127 132 aa8.26□□□□□ -1.09
DDX56-203ENST00000421223 OR2K2Q8NGT1 345 aa8.26□□□□□ -1.09
DDX56-203ENST00000421223 PGPEP1Q9NXJ5 209 aa8.26□□□□□ -1.09
DDX56-203ENST00000421223 SOCS3O14543 225 aa8.25□□□□□ -1.09
DDX56-203ENST00000421223 CFHR3Q02985 330 aa8.25□□□□□ -1.09
DDX56-203ENST00000421223 SLC25A34Q6PIV7 304 aa8.25□□□□□ -1.09
DDX56-203ENST00000421223 OR4C5Q8NGB2 326 aa8.25□□□□□ -1.09
DDX56-203ENST00000421223 TMEM158Q8WZ71 300 aa8.25□□□□□ -1.09
DDX56-203ENST00000421223 MS4A6AQ9H2W1 248 aa8.25□□□□□ -1.09
DDX56-203ENST00000421223 VCX2Q9H322 139 aa8.25□□□□□ -1.09
DDX56-203ENST00000421223 NUDT3O95989 172 aa8.25□□□□□ -1.09
DDX56-203ENST00000421223 MPV17L2Q567V2 206 aa8.25□□□□□ -1.09
DDX56-203ENST00000421223 DKK2Q9UBU2 259 aa8.25□□□□□ -1.09
DDX56-203ENST00000421223 J3QLI3 93 aa8.24□□□□□ -1.09
DDX56-203ENST00000421223 LINC01545Q5VT33 79 aa8.24□□□□□ -1.09
DDX56-203ENST00000421223 SAMD13Q5VXD3 122 aa8.24□□□□□ -1.09
DDX56-203ENST00000421223 ITPR2Q14571 2701 aa8.24□□□□□ -1.09
DDX56-203ENST00000421223 F5H697 171 aa8.24□□□□□ -1.09
DDX56-203ENST00000421223 CD7P09564 240 aa8.24□□□□□ -1.09
DDX56-203ENST00000421223 HOXD3P31249 432 aaPredicted RBP8.24□□□□□ -1.09
DDX56-203ENST00000421223 NMUP48645 174 aa8.24□□□□□ -1.09
DDX56-203ENST00000421223 FAM159AQ6UWV7 190 aa8.24□□□□□ -1.09
DDX56-203ENST00000421223 WFDC11Q8NEX6 87 aa8.24□□□□□ -1.09
DDX56-203ENST00000421223 SCRT2Q9NQ03 307 aa8.24□□□□□ -1.09
DDX56-203ENST00000421223 COX11Q9Y6N1 276 aa8.24□□□□□ -1.09
DDX56-203ENST00000421223 SLURP1P55000 103 aa8.24□□□□□ -1.09
DDX56-203ENST00000421223 CITED2Q99967 270 aaPredicted RBP8.24□□□□□ -1.09
DDX56-203ENST00000421223 JPT2Q9H910 190 aa8.24□□□□□ -1.09
DDX56-203ENST00000421223 SRSF2Q01130 221 aaKnown RBP8.23□□□□□ -1.09
DDX56-203ENST00000421223 SPINK13Q1W4C9 94 aa8.23□□□□□ -1.09
DDX56-203ENST00000421223 OCIAD2Q56VL3 154 aa8.23□□□□□ -1.09
DDX56-203ENST00000421223 FAM74A4Q5TZK3 123 aa8.23□□□□□ -1.09
DDX56-203ENST00000421223 NEGR1Q7Z3B1 354 aa8.23□□□□□ -1.09
DDX56-203ENST00000421223 RPL39LQ96EH5 51 aaKnown RBP8.23□□□□□ -1.09
DDX56-203ENST00000421223 PSMG3-AS1Q96PY0 264 aa8.23□□□□□ -1.09
DDX56-203ENST00000421223 CNFNQ9BYD5 112 aa8.23□□□□□ -1.09
DDX56-203ENST00000421223 NBPF19A0A087WUL8 3843 aa8.23□□□□□ -1.09
DDX56-203ENST00000421223 A0A087WWL8 130 aa8.23□□□□□ -1.09
DDX56-203ENST00000421223 A0A1W2PRX2 142 aa8.23□□□□□ -1.09
DDX56-203ENST00000421223 Q6YL49 198 aa8.23□□□□□ -1.09
DDX56-203ENST00000421223 FOXC2Q99958 501 aa8.23□□□□□ -1.09
DDX56-203ENST00000421223 C7orf71A4D174 169 aa8.22□□□□□ -1.09
DDX56-203ENST00000421223 DCANP1Q8TF63 244 aa8.22□□□□□ -1.09
DDX56-203ENST00000421223 ZNF702PQ9H963 129 aa8.22□□□□□ -1.09
DDX56-203ENST00000421223 NXT2Q9NPJ8 142 aaKnown RBP8.22□□□□□ -1.09
DDX56-203ENST00000421223 TENM4Q6N022 2769 aa8.22□□□□□ -1.09
DDX56-203ENST00000421223 SNRPD3P62318 126 aaKnown RBP8.22□□□□□ -1.09
DDX56-203ENST00000421223 ZNF469Q96JG9 3925 aaPredicted RBP8.22□□□□□ -1.09
DDX56-203ENST00000421223 HECTD1Q9ULT8 2610 aa8.22□□□□□ -1.09
DDX56-203ENST00000421223 JMJD1CQ15652 2540 aa8.22□□□□□ -1.09
DDX56-203ENST00000421223 TCTEX1D4Q5JR98 221 aa8.21□□□□□ -1.09
DDX56-203ENST00000421223 SS18L2Q9UHA2 77 aa8.21□□□□□ -1.09
DDX56-203ENST00000421223 SMIM17P0DL12 118 aa8.21□□□□□ -1.1
DDX56-203ENST00000421223 YAE1D1Q9NRH1 226 aa8.21□□□□□ -1.1
DDX56-203ENST00000421223 LENEPQ9Y5L5 61 aa8.21□□□□□ -1.1
DDX56-203ENST00000421223 K7EMT4 169 aa8.21□□□□□ -1.1
DDX56-203ENST00000421223 LGALS1P09382 135 aaKnown RBP8.21□□□□□ -1.1
DDX56-203ENST00000421223 FCER1GP30273 86 aa8.21□□□□□ -1.1
DDX56-203ENST00000421223 TMEM160Q9NX00 188 aa8.21□□□□□ -1.1
DDX56-203ENST00000421223 CR1P17927 2039 aa8.21□□□□□ -1.1
DDX56-203ENST00000421223 FASNP49327 2511 aaKnown RBP8.2□□□□□ -1.1
DDX56-203ENST00000421223 KNCNA6PVL3 124 aa8.2□□□□□ -1.1
DDX56-203ENST00000421223 OR11H1Q8NG94 326 aa8.2□□□□□ -1.1
DDX56-203ENST00000421223 TTTY13Q9BZ97 58 aa8.2□□□□□ -1.1
DDX56-203ENST00000421223 TRBV7-9A0A0J9YWB2 115 aa8.2□□□□□ -1.1
DDX56-203ENST00000421223 BVES-AS1Q5T3Y7 98 aa8.2□□□□□ -1.1
DDX56-203ENST00000421223 Q8N8P6 123 aa8.2□□□□□ -1.1
DDX56-203ENST00000421223 MYOZ3Q8TDC0 251 aa8.2□□□□□ -1.1
DDX56-203ENST00000421223 CST9LQ9H4G1 147 aa8.2□□□□□ -1.1
DDX56-203ENST00000421223 TNFRSF18Q9Y5U5 241 aa8.2□□□□□ -1.1
DDX56-203ENST00000421223 NACAE9PAV3 2078 aa8.19□□□□□ -1.1
DDX56-203ENST00000421223 CD5LO43866 347 aa8.19□□□□□ -1.1
DDX56-203ENST00000421223 PRM2P04554 102 aa8.19□□□□□ -1.1
DDX56-203ENST00000421223 RNASE3P12724 160 aaKnown RBP8.19□□□□□ -1.1
DDX56-203ENST00000421223 UBE2V1Q13404 147 aa8.19□□□□□ -1.1
DDX56-203ENST00000421223 LAGE3Q14657 143 aa8.19□□□□□ -1.1
DDX56-203ENST00000421223 NRACQ8N912 160 aa8.19□□□□□ -1.1
DDX56-203ENST00000421223 C2CD3Q4AC94 2353 aa8.19□□□□□ -1.1
DDX56-203ENST00000421223 VAMP3Q15836 100 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms