RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 IGLV2-11P01706 119 aa11.67□□□□□ -0.54
MSH6-203ENST00000420813 FLI1Q01543 452 aaPredicted RBP11.67□□□□□ -0.54
MSH6-203ENST00000420813 LGALSLQ3ZCW2 172 aaPredicted RBP11.67□□□□□ -0.54
MSH6-203ENST00000420813 SMUG1Q53HV7 270 aa11.67□□□□□ -0.54
MSH6-203ENST00000420813 TMEM75Q8N9X5 138 aa11.67□□□□□ -0.54
MSH6-203ENST00000420813 INO80EQ8NBZ0 244 aaPredicted RBP11.67□□□□□ -0.54
MSH6-203ENST00000420813 RNF222A6NCQ9 220 aa11.66□□□□□ -0.54
MSH6-203ENST00000420813 IBA57-AS1B1ANH7 110 aa11.66□□□□□ -0.54
MSH6-203ENST00000420813 GGTLC3B5MD39 225 aa11.66□□□□□ -0.54
MSH6-203ENST00000420813 PSCAO43653 123 aa11.66□□□□□ -0.54
MSH6-203ENST00000420813 CXorf1O96002 111 aa11.66□□□□□ -0.54
MSH6-203ENST00000420813 GCSHP23434 173 aa11.66□□□□□ -0.54
MSH6-203ENST00000420813 SUMO1P63165 101 aaKnown RBP11.66□□□□□ -0.54
MSH6-203ENST00000420813 DPPA3Q6W0C5 159 aa11.66□□□□□ -0.54
MSH6-203ENST00000420813 KCNRGQ8N5I3 272 aa11.66□□□□□ -0.54
MSH6-203ENST00000420813 CYB561D1Q8N8Q1 229 aa11.66□□□□□ -0.54
MSH6-203ENST00000420813 EPDR1Q9UM22 224 aa11.66□□□□□ -0.54
MSH6-203ENST00000420813 FAT1Q14517 4588 aa11.66□□□□□ -0.54
MSH6-203ENST00000420813 KANTRA0A1W2PQU2 76 aa11.65□□□□□ -0.54
MSH6-203ENST00000420813 LRCOL1A6NCL2 159 aa11.65□□□□□ -0.54
MSH6-203ENST00000420813 BCL2L11O43521 198 aa11.65□□□□□ -0.54
MSH6-203ENST00000420813 MGST1P10620 155 aaKnown RBP11.65□□□□□ -0.54
MSH6-203ENST00000420813 OR10J3Q5JRS4 329 aa11.65□□□□□ -0.54
MSH6-203ENST00000420813 ZNF506Q5JVG8 444 aa11.65□□□□□ -0.54
MSH6-203ENST00000420813 SAPCD1Q5SSQ6 148 aa11.65□□□□□ -0.54
MSH6-203ENST00000420813 LELP1Q5T871 98 aa11.65□□□□□ -0.54
MSH6-203ENST00000420813 TMUB2Q71RG4 321 aa11.65□□□□□ -0.54
MSH6-203ENST00000420813 NTN5Q8WTR8 489 aaPredicted RBP11.65□□□□□ -0.54
MSH6-203ENST00000420813 FRZBQ92765 325 aa11.65□□□□□ -0.54
MSH6-203ENST00000420813 ACTR3CQ9C0K3 210 aaPredicted RBP11.65□□□□□ -0.54
MSH6-203ENST00000420813 PGPEP1LA6NFU8 196 aa11.64□□□□□ -0.55
MSH6-203ENST00000420813 RNASE3P12724 160 aaKnown RBP11.64□□□□□ -0.55
MSH6-203ENST00000420813 IFITM2Q01629 132 aa11.64□□□□□ -0.55
MSH6-203ENST00000420813 Q5VSD8 79 aa11.64□□□□□ -0.55
MSH6-203ENST00000420813 PRNTQ86SH4 94 aa11.64□□□□□ -0.55
MSH6-203ENST00000420813 A0A1W2PRE2 83 aa11.63□□□□□ -0.55
MSH6-203ENST00000420813 PIK3CD-AS1Q5SR53 167 aa11.63□□□□□ -0.55
MSH6-203ENST00000420813 GTSF1LQ9H1H1 148 aa11.63□□□□□ -0.55
MSH6-203ENST00000420813 SH3BGRL3Q9H299 93 aa11.63□□□□□ -0.55
MSH6-203ENST00000420813 IGLV5-52A0A0A0MRZ9 124 aa11.62□□□□□ -0.55
MSH6-203ENST00000420813 IGHV3-73A0A0B4J1V6 119 aa11.62□□□□□ -0.55
MSH6-203ENST00000420813 INAFM2P0DMQ5 153 aa11.62□□□□□ -0.55
MSH6-203ENST00000420813 LAGE3Q14657 143 aa11.62□□□□□ -0.55
MSH6-203ENST00000420813 ATP6V0E2Q8NHE4 81 aa11.62□□□□□ -0.55
MSH6-203ENST00000420813 DMBT1Q9UGM3 2413 aaPredicted RBP11.62□□□□□ -0.55
MSH6-203ENST00000420813 ZFP2Q6ZN57 461 aa11.61□□□□□ -0.55
MSH6-203ENST00000420813 SLC51BQ86UW2 128 aa11.61□□□□□ -0.55
MSH6-203ENST00000420813 TMEM70Q9BUB7 260 aa11.61□□□□□ -0.55
MSH6-203ENST00000420813 IGKV3D-20A0A0C4DH25 116 aa11.6□□□□□ -0.55
MSH6-203ENST00000420813 A8MWV9 139 aa11.6□□□□□ -0.55
MSH6-203ENST00000420813 IFNA7P01567 189 aa11.6□□□□□ -0.55
MSH6-203ENST00000420813 IGHV3-30P01768 117 aa11.6□□□□□ -0.55
MSH6-203ENST00000420813 IGHV3-33P01772 117 aa11.6□□□□□ -0.55
MSH6-203ENST00000420813 IGHV3-30-3P0DP02 117 aa11.6□□□□□ -0.55
MSH6-203ENST00000420813 IGHV3-30-5P0DP03 117 aa11.6□□□□□ -0.55
MSH6-203ENST00000420813 Q8N814 137 aa11.6□□□□□ -0.55
MSH6-203ENST00000420813 PARLQ9H300 379 aa11.6□□□□□ -0.55
MSH6-203ENST00000420813 Q9HAA7 133 aa11.6□□□□□ -0.55
MSH6-203ENST00000420813 VPS13BQ7Z7G8 4022 aa11.6□□□□□ -0.55
MSH6-203ENST00000420813 BORCS7-ASMTA0A0B4J1R7 106 aa11.59□□□□□ -0.55
MSH6-203ENST00000420813 FABP5P3A8MUU1 101 aa11.59□□□□□ -0.55
MSH6-203ENST00000420813 LINC00694P0DN24 101 aa11.59□□□□□ -0.55
MSH6-203ENST00000420813 S100A4P26447 101 aaKnown RBP11.59□□□□□ -0.55
MSH6-203ENST00000420813 ARL2-SNX15V9GYD0 113 aa11.59□□□□□ -0.55
MSH6-203ENST00000420813 HERC1Q15751 4861 aa11.58□□□□□ -0.56
MSH6-203ENST00000420813 CTXND1A0A1B0GTU2 59 aa11.58□□□□□ -0.56
MSH6-203ENST00000420813 ASIPP42127 132 aa11.58□□□□□ -0.56
MSH6-203ENST00000420813 RPL7L1Q6DKI1 246 aaKnown RBP11.58□□□□□ -0.56
MSH6-203ENST00000420813 TEX261Q6UWH6 196 aa11.58□□□□□ -0.56
MSH6-203ENST00000420813 LINC00479Q96M42 142 aa11.58□□□□□ -0.56
MSH6-203ENST00000420813 TM2D2Q9BX73 214 aa11.58□□□□□ -0.56
MSH6-203ENST00000420813 ZNF471Q9BX82 626 aaPredicted RBP11.58□□□□□ -0.56
MSH6-203ENST00000420813 NKX6-2Q9C056 277 aaPredicted RBP11.58□□□□□ -0.56
MSH6-203ENST00000420813 IL36BQ9NZH7 164 aa11.58□□□□□ -0.56
MSH6-203ENST00000420813 TRAV34A0A0B4J273 112 aa11.57□□□□□ -0.56
MSH6-203ENST00000420813 PEX7O00628 323 aa11.57□□□□□ -0.56
MSH6-203ENST00000420813 EIF5AP63241 154 aaKnown RBP11.57□□□□□ -0.56
MSH6-203ENST00000420813 ZNF726P1Q15940 193 aa11.57□□□□□ -0.56
MSH6-203ENST00000420813 Q6ZSN1 163 aa11.57□□□□□ -0.56
MSH6-203ENST00000420813 Q86TA4 180 aa11.57□□□□□ -0.56
MSH6-203ENST00000420813 STOML3Q8TAV4 291 aa11.57□□□□□ -0.56
MSH6-203ENST00000420813 HIST1H2BAQ96A08 127 aa11.57□□□□□ -0.56
MSH6-203ENST00000420813 SRRM2Q9UQ35 2752 aaKnown RBP11.56□□□□□ -0.56
MSH6-203ENST00000420813 FAM229AH3BQW9 127 aa11.56□□□□□ -0.56
MSH6-203ENST00000420813 SMR3BP02814 79 aaPredicted RBP11.56□□□□□ -0.56
MSH6-203ENST00000420813 TPT1P13693 172 aaKnown RBP11.56□□□□□ -0.56
MSH6-203ENST00000420813 DNLZQ5SXM8 178 aa11.56□□□□□ -0.56
MSH6-203ENST00000420813 FLG2Q5D862 2391 aaPredicted RBP11.56□□□□□ -0.56
MSH6-203ENST00000420813 A0A087WWC5 75 aa11.55□□□□□ -0.56
MSH6-203ENST00000420813 GAGE12JA6NER3 117 aa11.55□□□□□ -0.56
MSH6-203ENST00000420813 B4DEV8 164 aa11.55□□□□□ -0.56
MSH6-203ENST00000420813 RHODO00212 210 aa11.55□□□□□ -0.56
MSH6-203ENST00000420813 FGF8P55075 233 aaPredicted RBP11.55□□□□□ -0.56
MSH6-203ENST00000420813 UBE2G2P60604 165 aa11.55□□□□□ -0.56
MSH6-203ENST00000420813 GAGE1Q13065 139 aa11.55□□□□□ -0.56
MSH6-203ENST00000420813 GAGE4Q13068 117 aa11.55□□□□□ -0.56
MSH6-203ENST00000420813 GAGE5Q13069 117 aa11.55□□□□□ -0.56
MSH6-203ENST00000420813 NDUFA5Q16718 116 aa11.55□□□□□ -0.56
MSH6-203ENST00000420813 GAGE13Q4V321 117 aa11.55□□□□□ -0.56
MSH6-203ENST00000420813 UFSP1Q6NVU6 142 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms