RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 SH2D6Q7Z4S9 175 aa4.74□□□□□ -1.65
RFX3-205ENST00000420720 SLC25A29Q8N8R3 303 aa4.74□□□□□ -1.65
RFX3-205ENST00000420720 SCGB1C1Q8TD33 95 aa4.74□□□□□ -1.65
RFX3-205ENST00000420720 TMED6Q8WW62 240 aa4.74□□□□□ -1.65
RFX3-205ENST00000420720 SGK494Q96LW2 274 aa4.74□□□□□ -1.65
RFX3-205ENST00000420720 SMIM3Q9BZL3 60 aa4.74□□□□□ -1.65
RFX3-205ENST00000420720 SDF2L1Q9HCN8 221 aa4.74□□□□□ -1.65
RFX3-205ENST00000420720 TREM1Q9NP99 234 aa4.74□□□□□ -1.65
RFX3-205ENST00000420720 OTORQ9NRC9 128 aa4.74□□□□□ -1.65
RFX3-205ENST00000420720 MBD2Q9UBB5 411 aa4.74□□□□□ -1.65
RFX3-205ENST00000420720 C9orf118A6NHY6 69 aa4.73□□□□□ -1.65
RFX3-205ENST00000420720 HMGB3O15347 200 aaKnown RBP4.73□□□□□ -1.65
RFX3-205ENST00000420720 RS1O15537 224 aa4.73□□□□□ -1.65
RFX3-205ENST00000420720 GNG5P63218 68 aa4.73□□□□□ -1.65
RFX3-205ENST00000420720 CYCSP99999 105 aaKnown RBP4.73□□□□□ -1.65
RFX3-205ENST00000420720 WFDC2Q14508 124 aa4.73□□□□□ -1.65
RFX3-205ENST00000420720 ZNF876PQ49A33 203 aa4.73□□□□□ -1.65
RFX3-205ENST00000420720 LELP1Q5T871 98 aa4.73□□□□□ -1.65
RFX3-205ENST00000420720 ENKURQ8TC29 256 aa4.73□□□□□ -1.65
RFX3-205ENST00000420720 PPP1R1CQ8WVI7 109 aa4.73□□□□□ -1.65
RFX3-205ENST00000420720 KCNS1Q96KK3 526 aa4.73□□□□□ -1.65
RFX3-205ENST00000420720 PRADC1Q9BSG0 188 aa4.73□□□□□ -1.65
RFX3-205ENST00000420720 HSPB11Q9Y547 144 aa4.73□□□□□ -1.65
RFX3-205ENST00000420720 TRBV6-4A0A1B0GX49 114 aa4.72□□□□□ -1.65
RFX3-205ENST00000420720 A0A1W2PPV4 95 aa4.72□□□□□ -1.65
RFX3-205ENST00000420720 PGPEP1LA6NFU8 196 aa4.72□□□□□ -1.65
RFX3-205ENST00000420720 RPL12P30050 165 aaKnown RBP4.72□□□□□ -1.65
RFX3-205ENST00000420720 ASIPP42127 132 aa4.72□□□□□ -1.65
RFX3-205ENST00000420720 ZNF80P51504 273 aaPredicted RBP4.72□□□□□ -1.65
RFX3-205ENST00000420720 RAB2AP61019 212 aa4.72□□□□□ -1.65
RFX3-205ENST00000420720 ASAH1Q13510 395 aa4.72□□□□□ -1.65
RFX3-205ENST00000420720 RHOHQ15669 191 aa4.72□□□□□ -1.65
RFX3-205ENST00000420720 ACOT6Q3I5F7 207 aaPredicted RBP4.72□□□□□ -1.65
RFX3-205ENST00000420720 CFAP126Q5VTH2 177 aa4.72□□□□□ -1.65
RFX3-205ENST00000420720 TMEM75Q8N9X5 138 aa4.72□□□□□ -1.65
RFX3-205ENST00000420720 ATP6V0E2Q8NHE4 81 aa4.72□□□□□ -1.65
RFX3-205ENST00000420720 ASB13Q8WXK3 278 aa4.72□□□□□ -1.65
RFX3-205ENST00000420720 WFDC1Q9HC57 220 aa4.72□□□□□ -1.65
RFX3-205ENST00000420720 NDUFA13Q9P0J0 144 aa4.72□□□□□ -1.65
RFX3-205ENST00000420720 C11orf21Q9P2W6 132 aa4.72□□□□□ -1.65
RFX3-205ENST00000420720 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.71□□□□□ -1.66
RFX3-205ENST00000420720 GAGE12JA6NER3 117 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 INMT-MINDY4F8WBC2 141 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 LECT2O14960 151 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 CIDEAO60543 219 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 MPC2O95563 127 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 H2BFSP57053 126 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 GAGE1Q13065 139 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 GAGE4Q13068 117 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 GAGE5Q13069 117 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 GAGE13Q4V321 117 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 ZNF506Q5JVG8 444 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 PQLC2Q6ZP29 291 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 ARL6IP6Q8N6S5 226 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 OR10G9Q8NGN4 311 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 OR10G7Q8NGN6 311 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 NDFIP1Q9BT67 221 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 TM2D2Q9BX73 214 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 GTSF1LQ9H1H1 148 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 PSG8Q9UQ74 426 aa4.71□□□□□ -1.66
RFX3-205ENST00000420720 TNXBP22105 4242 aa4.7□□□□□ -1.66
RFX3-205ENST00000420720 TAAR5O14804 337 aa4.7□□□□□ -1.66
RFX3-205ENST00000420720 GCGP01275 180 aa4.7□□□□□ -1.66
RFX3-205ENST00000420720 C1QBP02746 253 aa4.7□□□□□ -1.66
RFX3-205ENST00000420720 MGST1P10620 155 aaKnown RBP4.7□□□□□ -1.66
RFX3-205ENST00000420720 IFITM3Q01628 133 aa4.7□□□□□ -1.66
RFX3-205ENST00000420720 LINC01620Q4KN68 170 aa4.7□□□□□ -1.66
RFX3-205ENST00000420720 DAZ4Q86SG3 579 aaKnown RBP4.7□□□□□ -1.66
RFX3-205ENST00000420720 S100ZQ8WXG8 99 aa4.7□□□□□ -1.66
RFX3-205ENST00000420720 C9orf85Q96MD7 179 aa4.7□□□□□ -1.66
RFX3-205ENST00000420720 DAZ3Q9NR90 486 aaKnown RBP4.7□□□□□ -1.66
RFX3-205ENST00000420720 SERTM2A0A1B0GWG4 89 aa4.69□□□□□ -1.66
RFX3-205ENST00000420720 SSNA1O43805 119 aa4.69□□□□□ -1.66
RFX3-205ENST00000420720 UPK1BO75841 260 aa4.69□□□□□ -1.66
RFX3-205ENST00000420720 TCRAP04437 139 aa4.69□□□□□ -1.66
RFX3-205ENST00000420720 STAG3L2P0CL84 134 aa4.69□□□□□ -1.66
RFX3-205ENST00000420720 STAG3L3P0CL85 134 aa4.69□□□□□ -1.66
RFX3-205ENST00000420720 PET100P0DJ07 73 aa4.69□□□□□ -1.66
RFX3-205ENST00000420720 ARL14EPLP0DKL9 152 aa4.69□□□□□ -1.66
RFX3-205ENST00000420720 RNASE3P12724 160 aaKnown RBP4.69□□□□□ -1.66
RFX3-205ENST00000420720 CDC34P49427 236 aaPredicted RBP4.69□□□□□ -1.66
RFX3-205ENST00000420720 SUMO1P63165 101 aaKnown RBP4.69□□□□□ -1.66
RFX3-205ENST00000420720 LAGE3Q14657 143 aa4.69□□□□□ -1.66
RFX3-205ENST00000420720 SMUG1Q53HV7 270 aa4.69□□□□□ -1.66
RFX3-205ENST00000420720 Q6ZSA8 131 aa4.69□□□□□ -1.66
RFX3-205ENST00000420720 PRNTQ86SH4 94 aa4.69□□□□□ -1.66
RFX3-205ENST00000420720 OR2T35Q8NGX2 323 aa4.69□□□□□ -1.66
RFX3-205ENST00000420720 BAALCQ8WXS3 180 aa4.69□□□□□ -1.66
RFX3-205ENST00000420720 SAMD10Q9BYL1 202 aa4.69□□□□□ -1.66
RFX3-205ENST00000420720 PARLQ9H300 379 aa4.69□□□□□ -1.66
RFX3-205ENST00000420720 CDIP1Q9H305 208 aa4.69□□□□□ -1.66
RFX3-205ENST00000420720 TRAV8-3A0A0A6YYJ7 113 aa4.68□□□□□ -1.66
RFX3-205ENST00000420720 IGKV3D-20A0A0C4DH25 116 aa4.68□□□□□ -1.66
RFX3-205ENST00000420720 RBFOX3A6NFN3 312 aa4.68□□□□□ -1.66
RFX3-205ENST00000420720 GGTLC3B5MD39 225 aa4.68□□□□□ -1.66
RFX3-205ENST00000420720 K7EQM0 130 aa4.68□□□□□ -1.66
RFX3-205ENST00000420720 IGLV2-11P01706 119 aa4.68□□□□□ -1.66
RFX3-205ENST00000420720 S100A4P26447 101 aaKnown RBP4.68□□□□□ -1.66
RFX3-205ENST00000420720 GCHFRP30047 84 aa4.68□□□□□ -1.66
RFX3-205ENST00000420720 FLI1Q01543 452 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms