RNA–Protein interactions for RNA: ENST00000420329.6

CRTC3-202, Transcript of CREB regulated transcription coactivator 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CRTC3, Length 5,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-202ENST00000420329 Q8N7P7 452 aa12.81□□□□□ -0.36
CRTC3-202ENST00000420329 C11orf68Q9H3H3 251 aaKnown RBP12.81□□□□□ -0.36
CRTC3-202ENST00000420329 LOXL1Q08397 574 aaPredicted RBP12.81□□□□□ -0.36
CRTC3-202ENST00000420329 MAPK1IP1LQ8NDC0 245 aa12.81□□□□□ -0.36
CRTC3-202ENST00000420329 GATD1Q8NB37 220 aa12.81□□□□□ -0.36
CRTC3-202ENST00000420329 HCFC1P51610 2035 aa12.81□□□□□ -0.36
CRTC3-202ENST00000420329 IGLL5B9A064 214 aa12.81□□□□□ -0.36
CRTC3-202ENST00000420329 XCL2Q9UBD3 114 aa12.81□□□□□ -0.36
CRTC3-202ENST00000420329 NDUFA12Q9UI09 145 aa12.81□□□□□ -0.36
CRTC3-202ENST00000420329 OTOGLQ3ZCN5 2332 aa12.8□□□□□ -0.36
CRTC3-202ENST00000420329 TCTEX1D4Q5JR98 221 aa12.8□□□□□ -0.36
CRTC3-202ENST00000420329 C22orf34Q6ZV56 151 aa12.8□□□□□ -0.36
CRTC3-202ENST00000420329 FANCD2OSQ96PS1 177 aa12.8□□□□□ -0.36
CRTC3-202ENST00000420329 PTPRSQ13332 1948 aa12.8□□□□□ -0.36
CRTC3-202ENST00000420329 GATA3P23771 443 aa12.8□□□□□ -0.36
CRTC3-202ENST00000420329 TP73-AS1Q9UF72 201 aa12.8□□□□□ -0.36
CRTC3-202ENST00000420329 KIAA1549Q9HCM3 1950 aa12.79□□□□□ -0.36
CRTC3-202ENST00000420329 SH2D6Q7Z4S9 175 aa12.79□□□□□ -0.36
CRTC3-202ENST00000420329 RPL35AP18077 110 aaKnown RBP12.79□□□□□ -0.36
CRTC3-202ENST00000420329 IGHV3-38A0A0C4DH36 116 aa12.79□□□□□ -0.36
CRTC3-202ENST00000420329 LEPROTO15243 131 aa12.79□□□□□ -0.36
CRTC3-202ENST00000420329 H3BMM0 161 aa12.78□□□□□ -0.36
CRTC3-202ENST00000420329 UBE2WQ96B02 151 aa12.78□□□□□ -0.36
CRTC3-202ENST00000420329 EML5Q05BV3 1969 aa12.78□□□□□ -0.36
CRTC3-202ENST00000420329 CEP350Q5VT06 3117 aa12.78□□□□□ -0.36
CRTC3-202ENST00000420329 LRP4O75096 1905 aa12.78□□□□□ -0.36
CRTC3-202ENST00000420329 SPATA12Q7Z6I5 190 aa12.78□□□□□ -0.36
CRTC3-202ENST00000420329 NSUN5P1Q3KNT7 163 aa12.77□□□□□ -0.36
CRTC3-202ENST00000420329 ATG2AQ2TAZ0 1938 aa12.77□□□□□ -0.36
CRTC3-202ENST00000420329 H3BUA1 57 aa12.77□□□□□ -0.37
CRTC3-202ENST00000420329 SLC25A20O43772 301 aa12.77□□□□□ -0.37
CRTC3-202ENST00000420329 ODF1Q14990 250 aa12.77□□□□□ -0.37
CRTC3-202ENST00000420329 RNASE13Q5GAN3 156 aaKnown RBP12.77□□□□□ -0.37
CRTC3-202ENST00000420329 HIGD1BQ9P298 99 aa12.77□□□□□ -0.37
CRTC3-202ENST00000420329 RNF223E7ERA6 249 aa12.76□□□□□ -0.37
CRTC3-202ENST00000420329 RNF114Q9Y508 228 aa12.76□□□□□ -0.37
CRTC3-202ENST00000420329 CMC4P56277 68 aaPredicted RBP12.76□□□□□ -0.37
CRTC3-202ENST00000420329 FOXI2Q6ZQN5 318 aa12.76□□□□□ -0.37
CRTC3-202ENST00000420329 C6orf226Q5I0X4 101 aa12.75□□□□□ -0.37
CRTC3-202ENST00000420329 C16orf54Q6UWD8 224 aa12.75□□□□□ -0.37
CRTC3-202ENST00000420329 GAGE12JA6NER3 117 aa12.75□□□□□ -0.37
CRTC3-202ENST00000420329 GAGE4Q13068 117 aa12.75□□□□□ -0.37
CRTC3-202ENST00000420329 GAGE5Q13069 117 aa12.75□□□□□ -0.37
CRTC3-202ENST00000420329 PIEZO2Q9H5I5 2752 aa12.75□□□□□ -0.37
CRTC3-202ENST00000420329 NAV3Q8IVL0 2385 aa12.75□□□□□ -0.37
CRTC3-202ENST00000420329 ZNF80P51504 273 aaPredicted RBP12.75□□□□□ -0.37
CRTC3-202ENST00000420329 CACNA1AO00555 2505 aa12.74□□□□□ -0.37
CRTC3-202ENST00000420329 CUL9Q8IWT3 2517 aa12.74□□□□□ -0.37
CRTC3-202ENST00000420329 ZNRF2Q8NHG8 242 aa12.74□□□□□ -0.37
CRTC3-202ENST00000420329 CEP192Q8TEP8 1941 aa12.74□□□□□ -0.37
CRTC3-202ENST00000420329 UTRNP46939 3433 aa12.74□□□□□ -0.37
CRTC3-202ENST00000420329 ZNF48Q96MX3 618 aaPredicted RBP12.74□□□□□ -0.37
CRTC3-202ENST00000420329 ATP6V0BQ99437 205 aa12.74□□□□□ -0.37
CRTC3-202ENST00000420329 LINC01619G3V211 115 aa12.74□□□□□ -0.37
CRTC3-202ENST00000420329 ZFP36P26651 326 aaKnown RBP12.74□□□□□ -0.37
CRTC3-202ENST00000420329 SRSF2Q01130 221 aaKnown RBP12.74□□□□□ -0.37
CRTC3-202ENST00000420329 RHOHQ15669 191 aa12.74□□□□□ -0.37
CRTC3-202ENST00000420329 SUMO4Q6EEV6 95 aa12.74□□□□□ -0.37
CRTC3-202ENST00000420329 C9orf47Q6ZRZ4 202 aa12.74□□□□□ -0.37
CRTC3-202ENST00000420329 WFDC2Q14508 124 aa12.73□□□□□ -0.37
CRTC3-202ENST00000420329 CSPG4Q6UVK1 2322 aa12.73□□□□□ -0.37
CRTC3-202ENST00000420329 LGALS1P09382 135 aaKnown RBP12.73□□□□□ -0.37
CRTC3-202ENST00000420329 NBL1P41271 181 aa12.73□□□□□ -0.37
CRTC3-202ENST00000420329 TANC2Q9HCD6 1990 aa12.72□□□□□ -0.37
CRTC3-202ENST00000420329 VWC2LB2RUY7 222 aa12.72□□□□□ -0.37
CRTC3-202ENST00000420329 DEFB1P60022 68 aa12.72□□□□□ -0.37
CRTC3-202ENST00000420329 BLCAPP62952 87 aa12.72□□□□□ -0.37
CRTC3-202ENST00000420329 S100A7L2Q5SY68 101 aa12.72□□□□□ -0.37
CRTC3-202ENST00000420329 CFC1BP0CG36 223 aa12.72□□□□□ -0.37
CRTC3-202ENST00000420329 CFC1P0CG37 223 aa12.72□□□□□ -0.37
CRTC3-202ENST00000420329 ZFP2Q6ZN57 461 aa12.72□□□□□ -0.37
CRTC3-202ENST00000420329 C5orf56Q8N8D9 126 aa12.72□□□□□ -0.37
CRTC3-202ENST00000420329 AJUBAQ96IF1 538 aa12.72□□□□□ -0.37
CRTC3-202ENST00000420329 C1QTNF4Q9BXJ3 329 aa12.72□□□□□ -0.37
CRTC3-202ENST00000420329 MYCNOSP40205 109 aa12.71□□□□□ -0.37
CRTC3-202ENST00000420329 GAGE2AQ6NT46 116 aa12.71□□□□□ -0.37
CRTC3-202ENST00000420329 WNK1Q9H4A3 2382 aa12.71□□□□□ -0.37
CRTC3-202ENST00000420329 NTN5Q8WTR8 489 aaPredicted RBP12.71□□□□□ -0.38
CRTC3-202ENST00000420329 TRAV12-1A0A0B4J245 112 aa12.71□□□□□ -0.38
CRTC3-202ENST00000420329 IGHV4-61A0A0C4DH41 118 aa12.71□□□□□ -0.38
CRTC3-202ENST00000420329 IGHV4-59P01825 116 aa12.7□□□□□ -0.38
CRTC3-202ENST00000420329 IGHV4-38-2P0DP08 117 aa12.7□□□□□ -0.38
CRTC3-202ENST00000420329 DEFB130BP0DP73 79 aa12.7□□□□□ -0.38
CRTC3-202ENST00000420329 DEFB130AP0DP74 79 aa12.7□□□□□ -0.38
CRTC3-202ENST00000420329 CFHR3Q02985 330 aa12.7□□□□□ -0.38
CRTC3-202ENST00000420329 Q8NA96 180 aa12.7□□□□□ -0.38
CRTC3-202ENST00000420329 LINC00310P59036 64 aa12.69□□□□□ -0.38
CRTC3-202ENST00000420329 RPL39P62891 51 aaKnown RBP12.69□□□□□ -0.38
CRTC3-202ENST00000420329 ADORA2A-AS1P86434 159 aa12.69□□□□□ -0.38
CRTC3-202ENST00000420329 ELANEP08246 267 aa12.69□□□□□ -0.38
CRTC3-202ENST00000420329 JPT2Q9H910 190 aa12.69□□□□□ -0.38
CRTC3-202ENST00000420329 BAALCQ8WXS3 180 aa12.69□□□□□ -0.38
CRTC3-202ENST00000420329 OVOL2Q9BRP0 275 aa12.69□□□□□ -0.38
CRTC3-202ENST00000420329 CRYGBP07316 175 aa12.68□□□□□ -0.38
CRTC3-202ENST00000420329 DEFB112Q30KQ8 113 aa12.68□□□□□ -0.38
CRTC3-202ENST00000420329 TOMM6Q96B49 74 aa12.68□□□□□ -0.38
CRTC3-202ENST00000420329 CARD19Q96LW7 228 aa12.68□□□□□ -0.38
CRTC3-202ENST00000420329 NACAE9PAV3 2078 aa12.68□□□□□ -0.38
CRTC3-202ENST00000420329 A0A0J9YXV3 536 aa12.68□□□□□ -0.38
CRTC3-202ENST00000420329 IGLC6P0CF74 106 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms