RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 CD300EQ496F6 205 aaPredicted RBP9.81□□□□□ -0.84
LINC00642-201ENST00000419459 PCP2Q8IVA1 136 aa9.81□□□□□ -0.84
LINC00642-201ENST00000419459 C21orf62Q9NYP8 219 aa9.81□□□□□ -0.84
LINC00642-201ENST00000419459 IGHV3OR16-8A0A075B7F1 116 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 LOC389332A0A1B0GUA5 103 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 A0A1W2PRX2 142 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 CLPSL1A2RUU4 121 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 CRIP1P50238 77 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 TAL2Q16559 108 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 DEFB136Q30KP8 78 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 MRPL51Q4U2R6 128 aaKnown RBP9.8□□□□□ -0.84
LINC00642-201ENST00000419459 NAA38Q9BRA0 125 aaKnown RBP9.8□□□□□ -0.84
LINC00642-201ENST00000419459 FAM223BA6NKX1 122 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 H3BRN7 92 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 CLEC3BP05452 202 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 AZU1P20160 251 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 EVI2AP22794 236 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 KRTAP10-3P60369 221 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 ATP5G2Q06055 141 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 LYZL1Q6UWQ5 148 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 FAM223AQ8IWN6 122 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 AMN1Q8IY45 258 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 ZNF502Q8TBZ5 544 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 PHLDA1Q8WV24 401 aaPredicted RBP9.8□□□□□ -0.84
LINC00642-201ENST00000419459 SPATA25Q9BR10 227 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 CHAC1Q9BUX1 264 aa9.8□□□□□ -0.84
LINC00642-201ENST00000419459 H3BUA1 57 aa9.79□□□□□ -0.84
LINC00642-201ENST00000419459 GNG7O60262 68 aa9.79□□□□□ -0.84
LINC00642-201ENST00000419459 GCSHP23434 173 aa9.79□□□□□ -0.84
LINC00642-201ENST00000419459 DUX3Q96PT4 197 aa9.79□□□□□ -0.84
LINC00642-201ENST00000419459 CITED2Q99967 270 aaPredicted RBP9.79□□□□□ -0.84
LINC00642-201ENST00000419459 ELANEP08246 267 aa9.78□□□□□ -0.84
LINC00642-201ENST00000419459 FCGR2BP31994 310 aaPredicted RBP9.78□□□□□ -0.84
LINC00642-201ENST00000419459 CKS2P33552 79 aa9.78□□□□□ -0.84
LINC00642-201ENST00000419459 MFAP4P55083 255 aa9.78□□□□□ -0.84
LINC00642-201ENST00000419459 ZNF491Q8N8L2 437 aa9.78□□□□□ -0.84
LINC00642-201ENST00000419459 EEF1AKMT3Q96AZ1 226 aa9.78□□□□□ -0.84
LINC00642-201ENST00000419459 TPPP3Q9BW30 176 aa9.78□□□□□ -0.84
LINC00642-201ENST00000419459 MAP1LC3AQ9H492 121 aa9.78□□□□□ -0.84
LINC00642-201ENST00000419459 NXT2Q9NPJ8 142 aaKnown RBP9.78□□□□□ -0.84
LINC00642-201ENST00000419459 WI2-2373I1.2A0A1W2PRP0 233 aa9.78□□□□□ -0.84
LINC00642-201ENST00000419459 GAGE12HA6NDE8 117 aa9.78□□□□□ -0.84
LINC00642-201ENST00000419459 E9PLD3 99 aa9.78□□□□□ -0.84
LINC00642-201ENST00000419459 ATP5LO75964 103 aa9.78□□□□□ -0.84
LINC00642-201ENST00000419459 IGKV1-17P01599 117 aa9.78□□□□□ -0.84
LINC00642-201ENST00000419459 CTSGP08311 255 aa9.78□□□□□ -0.84
LINC00642-201ENST00000419459 FXYD2P54710 66 aa9.78□□□□□ -0.84
LINC00642-201ENST00000419459 KLK9Q2XQG4 91 aa9.78□□□□□ -0.84
LINC00642-201ENST00000419459 AAMDCQ9H7C9 122 aa9.78□□□□□ -0.84
LINC00642-201ENST00000419459 KLK9Q9UKQ9 250 aa9.78□□□□□ -0.84
LINC00642-201ENST00000419459 HHLA3Q9XRX5 114 aa9.78□□□□□ -0.84
LINC00642-201ENST00000419459 PKD1L1Q8TDX9 2849 aa9.77□□□□□ -0.85
LINC00642-201ENST00000419459 TMEM213A2RRL7 107 aa9.77□□□□□ -0.85
LINC00642-201ENST00000419459 FCER1GP30273 86 aa9.77□□□□□ -0.85
LINC00642-201ENST00000419459 ODF1Q14990 250 aa9.77□□□□□ -0.85
LINC00642-201ENST00000419459 CEND1Q8N111 149 aa9.77□□□□□ -0.85
LINC00642-201ENST00000419459 RNF152Q8N8N0 203 aa9.77□□□□□ -0.85
LINC00642-201ENST00000419459 MYOZ3Q8TDC0 251 aa9.77□□□□□ -0.85
LINC00642-201ENST00000419459 USMG5Q96IX5 58 aa9.77□□□□□ -0.85
LINC00642-201ENST00000419459 ATP6V0BQ99437 205 aa9.77□□□□□ -0.85
LINC00642-201ENST00000419459 SPANXB1Q9NS25 103 aaPredicted RBP9.77□□□□□ -0.85
LINC00642-201ENST00000419459 DKK2Q9UBU2 259 aa9.77□□□□□ -0.85
LINC00642-201ENST00000419459 MRPS12O15235 138 aaKnown RBP9.77□□□□□ -0.85
LINC00642-201ENST00000419459 BRI3O95415 125 aa9.77□□□□□ -0.85
LINC00642-201ENST00000419459 NPYP01303 97 aa9.77□□□□□ -0.85
LINC00642-201ENST00000419459 IGKCP01834 107 aa9.77□□□□□ -0.85
LINC00642-201ENST00000419459 KLHL30-AS1Q8NEE0 82 aa9.77□□□□□ -0.85
LINC00642-201ENST00000419459 WFDC12Q8WWY7 111 aa9.77□□□□□ -0.85
LINC00642-201ENST00000419459 TRBV7-1A0A0A6YYK4 115 aa9.76□□□□□ -0.85
LINC00642-201ENST00000419459 SH2D1AO60880 128 aa9.76□□□□□ -0.85
LINC00642-201ENST00000419459 C8orf86Q6ZUL3 223 aa9.76□□□□□ -0.85
LINC00642-201ENST00000419459 UBE2E2Q96LR5 201 aa9.76□□□□□ -0.85
LINC00642-201ENST00000419459 CNFNQ9BYD5 112 aa9.76□□□□□ -0.85
LINC00642-201ENST00000419459 TRBV25-1A0A075B6N4 114 aa9.75□□□□□ -0.85
LINC00642-201ENST00000419459 TWIST1Q15672 202 aa9.75□□□□□ -0.85
LINC00642-201ENST00000419459 GTSF1LQ9H1H1 148 aa9.75□□□□□ -0.85
LINC00642-201ENST00000419459 TMEM89A2RUT3 159 aa9.75□□□□□ -0.85
LINC00642-201ENST00000419459 LINC01619G3V211 115 aa9.75□□□□□ -0.85
LINC00642-201ENST00000419459 DPM2O94777 84 aa9.75□□□□□ -0.85
LINC00642-201ENST00000419459 IGLC6P0CF74 106 aa9.75□□□□□ -0.85
LINC00642-201ENST00000419459 ARL3P36405 182 aa9.75□□□□□ -0.85
LINC00642-201ENST00000419459 NSUN5P1Q3KNT7 163 aa9.75□□□□□ -0.85
LINC00642-201ENST00000419459 IGHV4OR15-8A0A075B7B6 117 aa9.74□□□□□ -0.85
LINC00642-201ENST00000419459 A0A087WW49 117 aa9.74□□□□□ -0.85
LINC00642-201ENST00000419459 SMAGPQ0VAQ4 97 aa9.74□□□□□ -0.85
LINC00642-201ENST00000419459 RNF125Q96EQ8 232 aa9.74□□□□□ -0.85
LINC00642-201ENST00000419459 C8orf49Q96NF6 230 aa9.74□□□□□ -0.85
LINC00642-201ENST00000419459 TSSC4Q9Y5U2 329 aaPredicted RBP9.74□□□□□ -0.85
LINC00642-201ENST00000419459 IGKV2D-26A0A0A0MRZ7 120 aa9.73□□□□□ -0.85
LINC00642-201ENST00000419459 IGLL5B9A064 214 aa9.73□□□□□ -0.85
LINC00642-201ENST00000419459 LGALS1P09382 135 aaKnown RBP9.73□□□□□ -0.85
LINC00642-201ENST00000419459 UNQ9165/PRO28630Q6UXU0 137 aa9.73□□□□□ -0.85
LINC00642-201ENST00000419459 MTURNQ8N3F0 131 aa9.73□□□□□ -0.85
LINC00642-201ENST00000419459 OR11H1Q8NG94 326 aa9.73□□□□□ -0.85
LINC00642-201ENST00000419459 ZNF479Q96JC4 524 aa9.73□□□□□ -0.85
LINC00642-201ENST00000419459 C17orf77Q96MU5 243 aa9.73□□□□□ -0.85
LINC00642-201ENST00000419459 NHP2Q9NX24 153 aaKnown RBP9.73□□□□□ -0.85
LINC00642-201ENST00000419459 ANK2Q01484 3957 aa9.73□□□□□ -0.85
LINC00642-201ENST00000419459 IL4P05112 153 aa9.73□□□□□ -0.85
LINC00642-201ENST00000419459 LEPP41159 167 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms