RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 GFRA4Q9GZZ7 299 aa4.95□□□□□ -1.62
CPS1-202ENST00000417946 SCRT2Q9NQ03 307 aa4.95□□□□□ -1.62
CPS1-202ENST00000417946 URGCP-MRPS24S4R325 110 aa4.95□□□□□ -1.62
CPS1-202ENST00000417946 DNAH9Q9NYC9 4486 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 IGHV1OR15-1A0A075B7D0 117 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 PLAC8L1A1L4L8 177 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 FAM231BA6NCW3 169 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 HIGD1CA8MV81 97 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 A8MWL6 223 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 K7EIL1 84 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 PHOX2AO14813 284 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 SPRY2O43597 315 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 SNAI2O43623 268 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 NXPH4O95158 308 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 AMBPP02760 352 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 ORM1P02763 201 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 PRB2P02812 416 aaPredicted RBP4.94□□□□□ -1.62
CPS1-202ENST00000417946 MALP21145 153 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 MORN3Q6PF18 240 aaPredicted RBP4.94□□□□□ -1.62
CPS1-202ENST00000417946 IL17DQ8TAD2 202 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 DAZAP1Q96EP5 407 aaKnown RBP4.94□□□□□ -1.62
CPS1-202ENST00000417946 C9orf85Q96MD7 179 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 C20orf144Q9BQM9 153 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 CNFNQ9BYD5 112 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 NAGKQ9UJ70 344 aa4.94□□□□□ -1.62
CPS1-202ENST00000417946 HUWE1Q7Z6Z7 4374 aaKnown RBP4.93□□□□□ -1.62
CPS1-202ENST00000417946 TRAV9-1A0A075B6T8 112 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 MUC21A0A0G2JKD1 596 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 KIR2DL5BA0A0G2JN68 375 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 KIR2DL5BA0A0G2JPC4 375 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 MUC21A0A140T8X8 626 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 A0A1W2PPQ1 181 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 H3BVH4 76 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 OR5AL1P0C617 328 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 ARMS2P0C7Q2 107 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 AZU1P20160 251 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 RPS20P60866 119 aaKnown RBP4.93□□□□□ -1.62
CPS1-202ENST00000417946 LYZL1Q6UWQ5 148 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 NBEAL2Q6ZNJ1 2754 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 KIR2DL5AQ8N109 375 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 GATD1Q8NB37 220 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 OR10AG1Q8NH19 301 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 KIR2DL5BQ8NHK3 375 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 PGLYRP4Q96LB8 373 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 KRTAP9-3Q9BYQ3 159 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 MSRB1Q9NZV6 116 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 MDFICQ9P1T7 246 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 NAT8BQ9UHF3 227 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 X6R8D5 127 aa4.93□□□□□ -1.62
CPS1-202ENST00000417946 IGHV4-4A0A075B6R2 117 aa4.92□□□□□ -1.62
CPS1-202ENST00000417946 LOC102724200A0A096LPH7 203 aaPredicted RBP4.92□□□□□ -1.62
CPS1-202ENST00000417946 SPINK4O60575 86 aa4.92□□□□□ -1.62
CPS1-202ENST00000417946 RAB5AP20339 215 aa4.92□□□□□ -1.62
CPS1-202ENST00000417946 MRPL54Q6P161 138 aaKnown RBP4.92□□□□□ -1.62
CPS1-202ENST00000417946 TMEM136Q6ZRR5 245 aa4.92□□□□□ -1.62
CPS1-202ENST00000417946 FER1L6-AS1Q8NA97 138 aa4.92□□□□□ -1.62
CPS1-202ENST00000417946 RNASE8Q8TDE3 154 aaKnown RBP4.92□□□□□ -1.62
CPS1-202ENST00000417946 FAM210BQ96KR6 192 aa4.92□□□□□ -1.62
CPS1-202ENST00000417946 CSTL1Q9H114 145 aa4.92□□□□□ -1.62
CPS1-202ENST00000417946 ASIPP42127 132 aa4.91□□□□□ -1.62
CPS1-202ENST00000417946 NUTF2P61970 127 aaKnown RBP4.91□□□□□ -1.62
CPS1-202ENST00000417946 KCNIP4Q6PIL6 250 aa4.91□□□□□ -1.62
CPS1-202ENST00000417946 FAM159AQ6UWV7 190 aa4.91□□□□□ -1.62
CPS1-202ENST00000417946 TMEM256Q8N2U0 113 aa4.91□□□□□ -1.62
CPS1-202ENST00000417946 BTF3L4Q96K17 158 aa4.91□□□□□ -1.62
CPS1-202ENST00000417946 KCNS1Q96KK3 526 aa4.91□□□□□ -1.62
CPS1-202ENST00000417946 KIF25-AS1Q9Y6Z4 181 aa4.91□□□□□ -1.62
CPS1-202ENST00000417946 MEGF8Q7Z7M0 2845 aa4.9□□□□□ -1.62
CPS1-202ENST00000417946 TRGV11A0A075B6L2 103 aa4.9□□□□□ -1.63
CPS1-202ENST00000417946 A0A1B0GUT8 65 aa4.9□□□□□ -1.63
CPS1-202ENST00000417946 CBY3A6NI87 242 aa4.9□□□□□ -1.63
CPS1-202ENST00000417946 SCGB1D1O95968 90 aa4.9□□□□□ -1.63
CPS1-202ENST00000417946 S100PP25815 95 aa4.9□□□□□ -1.63
CPS1-202ENST00000417946 LINC00315P59091 139 aa4.9□□□□□ -1.63
CPS1-202ENST00000417946 DEFB135Q30KP9 77 aa4.9□□□□□ -1.63
CPS1-202ENST00000417946 WDR73Q6P4I2 378 aa4.9□□□□□ -1.63
CPS1-202ENST00000417946 ATP5L2Q7Z4Y8 100 aa4.9□□□□□ -1.63
CPS1-202ENST00000417946 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.9□□□□□ -1.63
CPS1-202ENST00000417946 RNF183Q96D59 192 aa4.9□□□□□ -1.63
CPS1-202ENST00000417946 LINC01587Q99440 93 aa4.9□□□□□ -1.63
CPS1-202ENST00000417946 TPPP3Q9BW30 176 aa4.9□□□□□ -1.63
CPS1-202ENST00000417946 C1QTNF4Q9BXJ3 329 aa4.9□□□□□ -1.63
CPS1-202ENST00000417946 RETNQ9HD89 108 aa4.9□□□□□ -1.63
CPS1-202ENST00000417946 GSN-AS1Q9NRJ2 163 aa4.9□□□□□ -1.63
CPS1-202ENST00000417946 PRKDCP78527 4128 aaKnown RBP4.89□□□□□ -1.63
CPS1-202ENST00000417946 IGHV3OR16-12A0A075B7B8 117 aa4.89□□□□□ -1.63
CPS1-202ENST00000417946 XKRY2A2RUG3 117 aa4.89□□□□□ -1.63
CPS1-202ENST00000417946 NTF3P20783 257 aa4.89□□□□□ -1.63
CPS1-202ENST00000417946 APOC4P55056 127 aa4.89□□□□□ -1.63
CPS1-202ENST00000417946 HBBP68871 147 aa4.89□□□□□ -1.63
CPS1-202ENST00000417946 SLAQ13239 276 aa4.89□□□□□ -1.63
CPS1-202ENST00000417946 UFSP1Q6NVU6 142 aa4.89□□□□□ -1.63
CPS1-202ENST00000417946 ZNF493Q6ZR52 646 aa4.89□□□□□ -1.63
CPS1-202ENST00000417946 Q6ZWC4 215 aa4.89□□□□□ -1.63
CPS1-202ENST00000417946 LINC00612Q8N6U2 182 aa4.89□□□□□ -1.63
CPS1-202ENST00000417946 Q8NAQ8 132 aa4.89□□□□□ -1.63
CPS1-202ENST00000417946 TMEM263Q8WUH6 116 aaKnown RBP4.89□□□□□ -1.63
CPS1-202ENST00000417946 PTH2Q96A98 100 aa4.89□□□□□ -1.63
CPS1-202ENST00000417946 RNF185Q96GF1 192 aa4.89□□□□□ -1.63
CPS1-202ENST00000417946 OVOL2Q9BRP0 275 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms