RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 NUDT15Q9NV35 164 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 KLK12Q9UKR0 248 aa5.12□□□□□ -1.59
HLA-DPA1-241ENST00000417724 A8MWV9 139 aa5.11□□□□□ -1.59
HLA-DPA1-241ENST00000417724 PLA2G10O15496 165 aa5.11□□□□□ -1.59
HLA-DPA1-241ENST00000417724 LYRM1O43325 122 aa5.11□□□□□ -1.59
HLA-DPA1-241ENST00000417724 FFAR4Q5NUL3 377 aa5.11□□□□□ -1.59
HLA-DPA1-241ENST00000417724 NIT1Q86X76 327 aa5.11□□□□□ -1.59
HLA-DPA1-241ENST00000417724 OR2T35Q8NGX2 323 aa5.11□□□□□ -1.59
HLA-DPA1-241ENST00000417724 UBE2WQ96B02 151 aa5.11□□□□□ -1.59
HLA-DPA1-241ENST00000417724 DAZAP1Q96EP5 407 aaKnown RBP5.11□□□□□ -1.59
HLA-DPA1-241ENST00000417724 A0A087WX48 190 aa5.1□□□□□ -1.59
HLA-DPA1-241ENST00000417724 SERTM2A0A1B0GWG4 89 aa5.1□□□□□ -1.59
HLA-DPA1-241ENST00000417724 H2AFB2P0C5Z0 115 aa5.1□□□□□ -1.59
HLA-DPA1-241ENST00000417724 LINC00694P0DN24 101 aa5.1□□□□□ -1.59
HLA-DPA1-241ENST00000417724 Q0VG73 95 aa5.1□□□□□ -1.59
HLA-DPA1-241ENST00000417724 LGALSLQ3ZCW2 172 aaPredicted RBP5.1□□□□□ -1.59
HLA-DPA1-241ENST00000417724 PIK3CD-AS1Q5SR53 167 aa5.1□□□□□ -1.59
HLA-DPA1-241ENST00000417724 KCNIP4Q6PIL6 250 aa5.1□□□□□ -1.59
HLA-DPA1-241ENST00000417724 PQLC2Q6ZP29 291 aa5.1□□□□□ -1.59
HLA-DPA1-241ENST00000417724 SCGB1C1Q8TD33 95 aa5.1□□□□□ -1.59
HLA-DPA1-241ENST00000417724 PARLQ9H300 379 aa5.1□□□□□ -1.59
HLA-DPA1-241ENST00000417724 C11orf21Q9P2W6 132 aa5.1□□□□□ -1.59
HLA-DPA1-241ENST00000417724 A0A1W2PPV4 95 aa5.09□□□□□ -1.59
HLA-DPA1-241ENST00000417724 K7EQM0 130 aa5.09□□□□□ -1.59
HLA-DPA1-241ENST00000417724 GCGP01275 180 aa5.09□□□□□ -1.59
HLA-DPA1-241ENST00000417724 MT1HL1P0DM35 61 aa5.09□□□□□ -1.59
HLA-DPA1-241ENST00000417724 RNASE3P12724 160 aaKnown RBP5.09□□□□□ -1.59
HLA-DPA1-241ENST00000417724 ZNF80P51504 273 aaPredicted RBP5.09□□□□□ -1.59
HLA-DPA1-241ENST00000417724 HNRNPA3P51991 378 aaKnown RBP5.09□□□□□ -1.59
HLA-DPA1-241ENST00000417724 ATRAIDQ6UW56 229 aa5.09□□□□□ -1.59
HLA-DPA1-241ENST00000417724 Q6ZRU5 148 aa5.09□□□□□ -1.59
HLA-DPA1-241ENST00000417724 DNAJC30Q96LL9 226 aa5.09□□□□□ -1.59
HLA-DPA1-241ENST00000417724 SGK494Q96LW2 274 aa5.09□□□□□ -1.59
HLA-DPA1-241ENST00000417724 LINC00479Q96M42 142 aa5.09□□□□□ -1.59
HLA-DPA1-241ENST00000417724 CHCHD7Q9BUK0 85 aa5.09□□□□□ -1.59
HLA-DPA1-241ENST00000417724 SAMD10Q9BYL1 202 aa5.09□□□□□ -1.59
HLA-DPA1-241ENST00000417724 OR5AC2Q9NZP5 309 aa5.09□□□□□ -1.59
HLA-DPA1-241ENST00000417724 Q9UF83 564 aa5.09□□□□□ -1.59
HLA-DPA1-241ENST00000417724 A0A0D9SG52 128 aa5.08□□□□□ -1.6
HLA-DPA1-241ENST00000417724 S100A4P26447 101 aaKnown RBP5.08□□□□□ -1.6
HLA-DPA1-241ENST00000417724 GNG5P63218 68 aa5.08□□□□□ -1.6
HLA-DPA1-241ENST00000417724 CYCSP99999 105 aaKnown RBP5.08□□□□□ -1.6
HLA-DPA1-241ENST00000417724 ZFP69Q49AA0 526 aa5.08□□□□□ -1.6
HLA-DPA1-241ENST00000417724 LRRC37A5PQ49AS3 106 aa5.08□□□□□ -1.6
HLA-DPA1-241ENST00000417724 SMUG1Q53HV7 270 aa5.08□□□□□ -1.6
HLA-DPA1-241ENST00000417724 DMRTA1Q5VZB9 504 aa5.08□□□□□ -1.6
HLA-DPA1-241ENST00000417724 DGAT2L7PQ6IED9 249 aa5.08□□□□□ -1.6
HLA-DPA1-241ENST00000417724 C14orf178Q8N769 122 aaPredicted RBP5.08□□□□□ -1.6
HLA-DPA1-241ENST00000417724 TMEM75Q8N9X5 138 aa5.08□□□□□ -1.6
HLA-DPA1-241ENST00000417724 C5orf17Q8NAS9 161 aa5.08□□□□□ -1.6
HLA-DPA1-241ENST00000417724 C1orf43Q9BWL3 253 aa5.08□□□□□ -1.6
HLA-DPA1-241ENST00000417724 FAT3Q8TDW7 4589 aa5.07□□□□□ -1.6
HLA-DPA1-241ENST00000417724 FAM240BA0A1B0GVZ2 78 aa5.07□□□□□ -1.6
HLA-DPA1-241ENST00000417724 TMEM262E9PQX1 116 aa5.07□□□□□ -1.6
HLA-DPA1-241ENST00000417724 H0YIZ8 118 aa5.07□□□□□ -1.6
HLA-DPA1-241ENST00000417724 RHODO00212 210 aa5.07□□□□□ -1.6
HLA-DPA1-241ENST00000417724 EIF3GO75821 320 aaKnown RBP eCLIP5.07□□□□□ -1.6
HLA-DPA1-241ENST00000417724 TCRAP04437 139 aa5.07□□□□□ -1.6
HLA-DPA1-241ENST00000417724 FLI1Q01543 452 aaPredicted RBP5.07□□□□□ -1.6
HLA-DPA1-241ENST00000417724 SAPCD1Q5SSQ6 148 aa5.07□□□□□ -1.6
HLA-DPA1-241ENST00000417724 UFSP1Q6NVU6 142 aa5.07□□□□□ -1.6
HLA-DPA1-241ENST00000417724 C9orf163Q8N9P6 203 aa5.07□□□□□ -1.6
HLA-DPA1-241ENST00000417724 OR2G3Q8NGZ4 309 aa5.07□□□□□ -1.6
HLA-DPA1-241ENST00000417724 PSG8Q9UQ74 426 aa5.07□□□□□ -1.6
HLA-DPA1-241ENST00000417724 USP17L23D6RBM5 183 aa5.06□□□□□ -1.6
HLA-DPA1-241ENST00000417724 SIX6O95475 246 aa5.06□□□□□ -1.6
HLA-DPA1-241ENST00000417724 CRPP02741 224 aa5.06□□□□□ -1.6
HLA-DPA1-241ENST00000417724 ASIPP42127 132 aa5.06□□□□□ -1.6
HLA-DPA1-241ENST00000417724 PRNTQ86SH4 94 aa5.06□□□□□ -1.6
HLA-DPA1-241ENST00000417724 HSD17B11Q8NBQ5 300 aa5.06□□□□□ -1.6
HLA-DPA1-241ENST00000417724 OR10G7Q8NGN6 311 aa5.06□□□□□ -1.6
HLA-DPA1-241ENST00000417724 ZC2HC1AQ96GY0 325 aa5.06□□□□□ -1.6
HLA-DPA1-241ENST00000417724 RBM38Q9H0Z9 239 aaKnown RBP5.06□□□□□ -1.6
HLA-DPA1-241ENST00000417724 DPH3P1Q9H4G8 78 aa5.06□□□□□ -1.6
HLA-DPA1-241ENST00000417724 JPT2Q9H910 190 aa5.06□□□□□ -1.6
HLA-DPA1-241ENST00000417724 IL36BQ9NZH7 164 aa5.06□□□□□ -1.6
HLA-DPA1-241ENST00000417724 HSPB11Q9Y547 144 aa5.06□□□□□ -1.6
HLA-DPA1-241ENST00000417724 IGKV3D-20A0A0C4DH25 116 aa5.05□□□□□ -1.6
HLA-DPA1-241ENST00000417724 TRBV10-1A0A0K0K1A3 114 aa5.05□□□□□ -1.6
HLA-DPA1-241ENST00000417724 FABP5P3A8MUU1 101 aa5.05□□□□□ -1.6
HLA-DPA1-241ENST00000417724 HMGB3O15347 200 aaKnown RBP5.05□□□□□ -1.6
HLA-DPA1-241ENST00000417724 PRSS1P07477 247 aa5.05□□□□□ -1.6
HLA-DPA1-241ENST00000417724 ARL14EPLP0DKL9 152 aa5.05□□□□□ -1.6
HLA-DPA1-241ENST00000417724 SUMO1P63165 101 aaKnown RBP5.05□□□□□ -1.6
HLA-DPA1-241ENST00000417724 RPL36AP83881 106 aaKnown RBP5.05□□□□□ -1.6
HLA-DPA1-241ENST00000417724 FAM74A4Q5TZK3 123 aa5.05□□□□□ -1.6
HLA-DPA1-241ENST00000417724 MZT2BQ6NZ67 158 aa5.05□□□□□ -1.6
HLA-DPA1-241ENST00000417724 ENHOQ6UWT2 76 aa5.05□□□□□ -1.6
HLA-DPA1-241ENST00000417724 RPL36ALQ969Q0 106 aaKnown RBP5.05□□□□□ -1.6
HLA-DPA1-241ENST00000417724 DPH3Q96FX2 82 aa5.05□□□□□ -1.6
HLA-DPA1-241ENST00000417724 SMIM3Q9BZL3 60 aa5.05□□□□□ -1.6
HLA-DPA1-241ENST00000417724 EPDR1Q9UM22 224 aa5.05□□□□□ -1.6
HLA-DPA1-241ENST00000417724 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.05□□□□□ -1.6
HLA-DPA1-241ENST00000417724 TRBV7-3A0A075B6L6 115 aa5.04□□□□□ -1.6
HLA-DPA1-241ENST00000417724 B4DEV8 164 aa5.04□□□□□ -1.6
HLA-DPA1-241ENST00000417724 HLA-DQA1P01909 254 aa5.04□□□□□ -1.6
HLA-DPA1-241ENST00000417724 ANGP03950 147 aaKnown RBP5.04□□□□□ -1.6
HLA-DPA1-241ENST00000417724 PET100P0DJ07 73 aa5.04□□□□□ -1.6
HLA-DPA1-241ENST00000417724 RPL12P30050 165 aaKnown RBP5.04□□□□□ -1.6
HLA-DPA1-241ENST00000417724 RAB2AP61019 212 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms