RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 IGLV1-51P01701 117 aa4.15□□□□□ -1.75
EPHA4-204ENST00000415749 PFN1P07737 140 aaKnown RBP4.15□□□□□ -1.75
EPHA4-204ENST00000415749 AKR1D1P51857 326 aa4.15□□□□□ -1.75
EPHA4-204ENST00000415749 RPL23P62829 140 aaKnown RBP4.15□□□□□ -1.75
EPHA4-204ENST00000415749 ZNF816Q0VGE8 651 aaPredicted RBP4.15□□□□□ -1.75
EPHA4-204ENST00000415749 FABP9Q0Z7S8 132 aa4.15□□□□□ -1.75
EPHA4-204ENST00000415749 EBI3Q14213 229 aa4.15□□□□□ -1.75
EPHA4-204ENST00000415749 C6orf99Q4VX62 202 aa4.15□□□□□ -1.75
EPHA4-204ENST00000415749 LCN15Q6UWW0 184 aa4.15□□□□□ -1.75
EPHA4-204ENST00000415749 LINC00322Q6ZN03 302 aaPredicted RBP4.15□□□□□ -1.75
EPHA4-204ENST00000415749 CYP2G1PQ6ZSU1 146 aa4.15□□□□□ -1.75
EPHA4-204ENST00000415749 CAMK2N1Q7Z7J9 78 aa4.15□□□□□ -1.75
EPHA4-204ENST00000415749 Q8N9W7 124 aa4.15□□□□□ -1.75
EPHA4-204ENST00000415749 ZNF439Q8NDP4 499 aa4.15□□□□□ -1.75
EPHA4-204ENST00000415749 DTD1Q8TEA8 209 aa4.15□□□□□ -1.75
EPHA4-204ENST00000415749 CIB3Q96Q77 187 aaPredicted RBP4.15□□□□□ -1.75
EPHA4-204ENST00000415749 TIMM17AQ99595 171 aa4.15□□□□□ -1.75
EPHA4-204ENST00000415749 NPCDR1Q9BY65 106 aa4.15□□□□□ -1.75
EPHA4-204ENST00000415749 GNG13Q9P2W3 67 aa4.15□□□□□ -1.75
EPHA4-204ENST00000415749 VPS13DQ5THJ4 4388 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 TRGV10A0A0A0MS01 117 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 TGIF2-C20orf24A0A0A6YYL0 155 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 IGHV3-43A0A0B4J1X8 118 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 IGKV3D-20A0A0C4DH25 116 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 PSPHP1O15172 72 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 TGOLN2O43493 480 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 HIST1H2BKO60814 126 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 YIF1AO95070 293 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 IFNA1P01562 189 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 HIST1H2BJP06899 126 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 GZMHP20718 246 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 FGF7P21781 194 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 HIST1H2BOP23527 126 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 NPPCP23582 126 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 TSPOP30536 169 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 HIST1H2BBP33778 126 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 NMUP48645 174 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 PSMB2P49721 201 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 HIST1H2BDP58876 126 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 HIST1H2BCP62807 126 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 MEF2BQ02080 365 aaPredicted RBP4.14□□□□□ -1.75
EPHA4-204ENST00000415749 DIAPH2-AS1Q14236 149 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 HIST2H2BEQ16778 126 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.14□□□□□ -1.75
EPHA4-204ENST00000415749 DNLZQ5SXM8 178 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 C9orf129Q5T035 196 aaKnown RBP4.14□□□□□ -1.75
EPHA4-204ENST00000415749 SLC16A13Q7RTY0 426 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.14□□□□□ -1.75
EPHA4-204ENST00000415749 HIST1H2BHQ93079 126 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 HIST1H2BNQ99877 126 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 HIST1H2BMQ99879 126 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 HSPB9Q9BQS6 159 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 TCEAL7Q9BRU2 100 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 GGACTQ9BVM4 153 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 MANBALQ9NQG1 85 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 DOK5Q9P104 306 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 NAT8Q9UHE5 227 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 PSG11Q9UQ72 335 aa4.14□□□□□ -1.75
EPHA4-204ENST00000415749 AMMECR1Q9Y4X0 333 aaPredicted RBP4.14□□□□□ -1.75
EPHA4-204ENST00000415749 RBM7Q9Y580 266 aaKnown RBP4.14□□□□□ -1.75
EPHA4-204ENST00000415749 IGHV3-72A0A0B4J1Y9 119 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 TRAV3A0A0B4J244 114 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 FAM168BA1KXE4 195 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 CEBPZOSA8MTT3 80 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 G3V318 75 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 INSP01308 110 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 IGHV3-7P01780 117 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 CTRLP40313 264 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 CXCL5P42830 114 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 RPS10P46783 165 aaKnown RBP4.13□□□□□ -1.75
EPHA4-204ENST00000415749 SPCS3P61009 180 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 Q8N6K4 173 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 OR10P1Q8NGE3 313 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 OR2T10Q8NGZ9 312 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 FRZBQ92765 325 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 PTH2Q96A98 100 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 FAM210BQ96KR6 192 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 TMEM208Q9BTX3 173 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 SAMD10Q9BYL1 202 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 SPANXB1Q9NS25 103 aaPredicted RBP4.13□□□□□ -1.75
EPHA4-204ENST00000415749 SLC39A9Q9NUM3 307 aa4.13□□□□□ -1.75
EPHA4-204ENST00000415749 DYNC1H1Q14204 4646 aaKnown RBP4.13□□□□□ -1.75
EPHA4-204ENST00000415749 IGHV1-3A0A0C4DH29 117 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 TINCRA0A1B0GVN0 87 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 A0A1B0GVY2 172 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 LINC00587B1AMM8 73 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 NDUFC2-KCTD14E9PQ53 114 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 FNDC10F2Z333 226 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 M0R1X1 148 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 CYB5BO43169 146 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 GGCTO75223 188 aaKnown RBP4.12□□□□□ -1.75
EPHA4-204ENST00000415749 TRGC2P03986 189 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 TYMSP04818 313 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 LGALS1P09382 135 aaKnown RBP4.12□□□□□ -1.75
EPHA4-204ENST00000415749 TRGC1P0CF51 173 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 SAA2P0DJI9 122 aaPredicted RBP4.12□□□□□ -1.75
EPHA4-204ENST00000415749 OPRK1P41145 380 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 PSMB3P49720 205 aa4.12□□□□□ -1.75
EPHA4-204ENST00000415749 KRTAP10-6P60371 365 aaPredicted RBP4.12□□□□□ -1.75
EPHA4-204ENST00000415749 LYZP61626 148 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms