RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 TRBV20-1A0A075B6N2 111 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 FXYD6-FXYD2A0A087WZ82 144 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 A0A087X0K7 114 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 IGKV3OR2-268A0A0C4DH90 116 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 TMEM212A6NML5 194 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 A8MWP4 228 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 J3QLW9 94 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 NUPR1O60356 82 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 BCE1O60756 84 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 SLC22A5O76082 557 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 HMGN1P05114 100 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 FABP3P05413 133 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 SLC25A4P12235 298 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 HRES1P13985 223 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 LPAR6P43657 344 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 CBX5P45973 191 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 SUB1P53999 127 aaKnown RBP eCLIP0.84□□□□□ -2.27
LINC00428-201ENST00000415620 HSPE1P61604 102 aaKnown RBP0.84□□□□□ -2.27
LINC00428-201ENST00000415620 UBE2D2P62837 147 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 TRAM1Q15629 374 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 BSXQ3C1V8 233 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 HACD4Q5VWC8 232 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 EPGNQ6UW88 154 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 NTM-AS1Q6ZSK4 140 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 LHFPL1Q86WI0 220 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 OR5AK2Q8NH90 309 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 C4orf36Q96KX1 117 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 AGPAT4-IT1Q9H0P7 198 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 LPAR5Q9H1C0 372 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 VCXQ9H320 206 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 CMTM6Q9NX76 183 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 FKBP11Q9NYL4 201 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 SAR1BQ9Y6B6 198 aa0.84□□□□□ -2.27
LINC00428-201ENST00000415620 IGLV4-69A0A075B6H9 119 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 TRAV6A0A075B6T7 132 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 INS-IGF2F8WCM5 200 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 H3BRN7 92 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 NME4O00746 187 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 MRASO14807 208 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 SNNO75324 88 aaPredicted RBP0.83□□□□□ -2.28
LINC00428-201ENST00000415620 IGKV1-5P01602 117 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 RLN1P04808 185 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 TYMSP04818 313 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 CD2P06729 351 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 CTRLP40313 264 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 HTR2BP41595 481 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 GTF2A1P52655 376 aaPredicted RBP0.83□□□□□ -2.28
LINC00428-201ENST00000415620 RPS29P62273 56 aaKnown RBP0.83□□□□□ -2.28
LINC00428-201ENST00000415620 CATR1Q13166 79 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 ZNF266Q14584 549 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 SURF2Q15527 256 aaPredicted RBP0.83□□□□□ -2.28
LINC00428-201ENST00000415620 HSD17B12Q53GQ0 312 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 CST9LP1Q5W188 147 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 XAF1Q6GPH4 301 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 TMEM182Q6ZP80 229 aaPredicted RBP0.83□□□□□ -2.28
LINC00428-201ENST00000415620 ZNF818PQ6ZRF7 136 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 Q6ZS49 121 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 GID4Q8IVV7 300 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 CCDC197Q8NCU1 140 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 OR56B1Q8NGI3 324 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 DTD1Q8TEA8 209 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 NSMCE2Q96MF7 247 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 GPR82Q96P67 336 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 SRRQ9GZT4 340 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 CYSTM1Q9H1C7 97 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 MBD2Q9UBB5 411 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 NAGKQ9UJ70 344 aa0.83□□□□□ -2.28
LINC00428-201ENST00000415620 IGKV2-40A0A087WW87 121 aaPredicted RBP0.82□□□□□ -2.28
LINC00428-201ENST00000415620 DAPL1A0PJW8 107 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 SNRPGP15A8MWD9 76 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 FNDC10F2Z333 226 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 M0R3E3 92 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 BIRC5O15392 142 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 CST7O76096 145 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 IGKV2D-40P01614 121 aaPredicted RBP0.82□□□□□ -2.28
LINC00428-201ENST00000415620 IGKV4-1P06312 121 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 RPL7P18124 248 aaKnown RBP0.82□□□□□ -2.28
LINC00428-201ENST00000415620 F2RP25116 425 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 TGFBR1P36897 503 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 SULT1A2P50226 295 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 CAV2P51636 162 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 VSNL1P62760 191 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 P2RY14Q15391 338 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 RAB11BQ15907 218 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 LAIR2Q6ISS4 152 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 UFSP1Q6NVU6 142 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 LPCAT3Q6P1A2 487 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 FAM159AQ6UWV7 190 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 LCN15Q6UWW0 184 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 ACOT7LQ6ZUV0 252 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 SPC24Q8NBT2 197 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 MNS1Q8NEH6 495 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 OR10G2Q8NGC3 310 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 RNASE11Q8TAA1 199 aaKnown RBP0.82□□□□□ -2.28
LINC00428-201ENST00000415620 CHCHD10Q8WYQ3 142 aaPredicted RBP0.82□□□□□ -2.28
LINC00428-201ENST00000415620 TSC22D3Q99576 134 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 MGLLQ99685 303 aa0.82□□□□□ -2.28
LINC00428-201ENST00000415620 IGHV1-58A0A0C4DH39 117 aa0.81□□□□□ -2.28
LINC00428-201ENST00000415620 C19orf71A6NCJ1 209 aa0.81□□□□□ -2.28
LINC00428-201ENST00000415620 J3QRE1 110 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms