RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 FAM90A1Q86YD7 464 aa15.78■□□□□ 0.12
AP1S3-205ENST00000415298 CD177Q8N6Q3 437 aa15.78■□□□□ 0.12
AP1S3-205ENST00000415298 CCL19Q99731 98 aa15.78■□□□□ 0.12
AP1S3-205ENST00000415298 IGKV1D-17A0A075B6S4 117 aa15.78■□□□□ 0.12
AP1S3-205ENST00000415298 OOEPA6NGQ2 149 aa15.78■□□□□ 0.12
AP1S3-205ENST00000415298 MYCNOSP40205 109 aa15.77■□□□□ 0.12
AP1S3-205ENST00000415298 FMC1Q96HJ9 113 aa15.77■□□□□ 0.12
AP1S3-205ENST00000415298 ZNF256Q9Y2P7 627 aaPredicted RBP15.77■□□□□ 0.12
AP1S3-205ENST00000415298 PSPNO60542 156 aa15.77■□□□□ 0.12
AP1S3-205ENST00000415298 HLA-DMBP28068 263 aa15.77■□□□□ 0.12
AP1S3-205ENST00000415298 PAXXQ9BUH6 204 aa15.77■□□□□ 0.12
AP1S3-205ENST00000415298 LINC00336Q6ZUF6 198 aa15.76■□□□□ 0.11
AP1S3-205ENST00000415298 ZNRF1Q8ND25 227 aa15.76■□□□□ 0.11
AP1S3-205ENST00000415298 PYYP10082 97 aa15.75■□□□□ 0.11
AP1S3-205ENST00000415298 PRDX2P32119 198 aa15.75■□□□□ 0.11
AP1S3-205ENST00000415298 C2orf48Q96LS8 159 aa15.75■□□□□ 0.11
AP1S3-205ENST00000415298 hADV29S1A0JD25 119 aa15.75■□□□□ 0.11
AP1S3-205ENST00000415298 FAM19A4Q96LR4 140 aa15.75■□□□□ 0.11
AP1S3-205ENST00000415298 MRPL35Q9NZE8 188 aaKnown RBP15.75■□□□□ 0.11
AP1S3-205ENST00000415298 MED13LQ71F56 2210 aa15.75■□□□□ 0.11
AP1S3-205ENST00000415298 MORN5Q5VZ52 161 aa15.74■□□□□ 0.11
AP1S3-205ENST00000415298 FAM104BQ5XKR9 115 aa15.74■□□□□ 0.11
AP1S3-205ENST00000415298 CCL13Q99616 98 aa15.74■□□□□ 0.11
AP1S3-205ENST00000415298 SVEP1Q4LDE5 3571 aa15.74■□□□□ 0.11
AP1S3-205ENST00000415298 IGHV4-39P01824 125 aa15.74■□□□□ 0.11
AP1S3-205ENST00000415298 LEPP41159 167 aa15.74■□□□□ 0.11
AP1S3-205ENST00000415298 ANKRD17O75179 2603 aaKnown RBP15.74■□□□□ 0.11
AP1S3-205ENST00000415298 LYPD2Q6UXB3 125 aa15.73■□□□□ 0.11
AP1S3-205ENST00000415298 ITPR2Q14571 2701 aa15.73■□□□□ 0.11
AP1S3-205ENST00000415298 DSCR8Q96T75 97 aa15.73■□□□□ 0.11
AP1S3-205ENST00000415298 LINC01546A6NGU7 62 aa15.72■□□□□ 0.11
AP1S3-205ENST00000415298 FAM216BQ8N7L0 139 aa15.72■□□□□ 0.11
AP1S3-205ENST00000415298 NXT2Q9NPJ8 142 aaKnown RBP15.72■□□□□ 0.11
AP1S3-205ENST00000415298 INS-IGF2F8WCM5 200 aa15.72■□□□□ 0.11
AP1S3-205ENST00000415298 EXOC3-AS1Q8N2X6 119 aa15.72■□□□□ 0.11
AP1S3-205ENST00000415298 PLNP26678 52 aa15.71■□□□□ 0.11
AP1S3-205ENST00000415298 IGKV1OR2-108A0A075B7D4 117 aa15.71■□□□□ 0.11
AP1S3-205ENST00000415298 LINC00473A8K010 186 aa15.71■□□□□ 0.11
AP1S3-205ENST00000415298 ZNF497Q6ZNH5 498 aa15.71■□□□□ 0.11
AP1S3-205ENST00000415298 UNC79Q9P2D8 2635 aa15.7■□□□□ 0.1
AP1S3-205ENST00000415298 PFN2P35080 140 aa15.7■□□□□ 0.1
AP1S3-205ENST00000415298 SRSF12Q8WXF0 261 aaKnown RBP15.7■□□□□ 0.1
AP1S3-205ENST00000415298 FXYD5Q96DB9 178 aa15.7■□□□□ 0.1
AP1S3-205ENST00000415298 TRAV13-1A0A0B4J241 112 aa15.7■□□□□ 0.1
AP1S3-205ENST00000415298 LINC01620Q4KN68 170 aa15.7■□□□□ 0.1
AP1S3-205ENST00000415298 MRPL51Q4U2R6 128 aaKnown RBP15.7■□□□□ 0.1
AP1S3-205ENST00000415298 GAFA1Q96PS6 74 aa15.7■□□□□ 0.1
AP1S3-205ENST00000415298 NAV2Q8IVL1 2488 aa15.7■□□□□ 0.1
AP1S3-205ENST00000415298 TET2Q6N021 2002 aaPredicted RBP15.7■□□□□ 0.1
AP1S3-205ENST00000415298 TRBV10-2A0A0K0K1G8 114 aa15.69■□□□□ 0.1
AP1S3-205ENST00000415298 TMEM170BQ5T4T1 132 aa15.69■□□□□ 0.1
AP1S3-205ENST00000415298 PGPA6NDG6 321 aa15.69■□□□□ 0.1
AP1S3-205ENST00000415298 J3QQQ9 107 aa15.69■□□□□ 0.1
AP1S3-205ENST00000415298 C8orf31Q8N9H6 132 aa15.69■□□□□ 0.1
AP1S3-205ENST00000415298 CTSZQ9UBR2 303 aa15.69■□□□□ 0.1
AP1S3-205ENST00000415298 ARHGAP32A7KAX9 2087 aa15.68■□□□□ 0.1
AP1S3-205ENST00000415298 ATXN8Q156A1 80 aa15.68■□□□□ 0.1
AP1S3-205ENST00000415298 PRO1854Q9UHT4 67 aa15.68■□□□□ 0.1
AP1S3-205ENST00000415298 CFC1BP0CG36 223 aa15.67■□□□□ 0.1
AP1S3-205ENST00000415298 CFC1P0CG37 223 aa15.67■□□□□ 0.1
AP1S3-205ENST00000415298 CKS2P33552 79 aa15.67■□□□□ 0.1
AP1S3-205ENST00000415298 C9orf85Q96MD7 179 aa15.67■□□□□ 0.1
AP1S3-205ENST00000415298 DCTN5Q9BTE1 182 aa15.67■□□□□ 0.1
AP1S3-205ENST00000415298 MALRD1Q5VYJ5 2156 aa15.67■□□□□ 0.1
AP1S3-205ENST00000415298 P0DMU3 169 aa15.67■□□□□ 0.1
AP1S3-205ENST00000415298 FAM231AP0DMU4 169 aa15.67■□□□□ 0.1
AP1S3-205ENST00000415298 FAM231CP0DMU5 169 aa15.67■□□□□ 0.1
AP1S3-205ENST00000415298 ZNF785A8K8V0 405 aa15.66■□□□□ 0.1
AP1S3-205ENST00000415298 LINC00205P59089 165 aa15.66■□□□□ 0.1
AP1S3-205ENST00000415298 C1orf195Q5TG92 126 aa15.66■□□□□ 0.1
AP1S3-205ENST00000415298 Q71RC1 249 aaPredicted RBP15.66■□□□□ 0.1
AP1S3-205ENST00000415298 SLC25A39Q9BZJ4 359 aaPredicted RBP15.66■□□□□ 0.1
AP1S3-205ENST00000415298 CYSTM1Q9H1C7 97 aa15.66■□□□□ 0.1
AP1S3-205ENST00000415298 RPUSD1Q9UJJ7 312 aaKnown RBP15.66■□□□□ 0.1
AP1S3-205ENST00000415298 NDUFA3O95167 84 aa15.66■□□□□ 0.1
AP1S3-205ENST00000415298 DEFB121Q5J5C9 76 aa15.66■□□□□ 0.1
AP1S3-205ENST00000415298 SCGB1D4Q6XE38 83 aa15.66■□□□□ 0.1
AP1S3-205ENST00000415298 BPESC1Q9GZL8 116 aa15.66■□□□□ 0.1
AP1S3-205ENST00000415298 SIRPDQ9H106 197 aa15.66■□□□□ 0.1
AP1S3-205ENST00000415298 FAM236DA0A1B0GTK5 79 aa15.65■□□□□ 0.1
AP1S3-205ENST00000415298 LY6LH3BQJ8 138 aa15.65■□□□□ 0.1
AP1S3-205ENST00000415298 FAM236CP0DP71 79 aa15.65■□□□□ 0.1
AP1S3-205ENST00000415298 ERVK-16P61578 105 aa15.65■□□□□ 0.1
AP1S3-205ENST00000415298 HERVK_113P61574 105 aa15.64■□□□□ 0.09
AP1S3-205ENST00000415298 GOLT1AQ6ZVE7 132 aa15.64■□□□□ 0.09
AP1S3-205ENST00000415298 ZNF714Q96N38 554 aa15.64■□□□□ 0.09
AP1S3-205ENST00000415298 PDZD2O15018 2839 aa15.64■□□□□ 0.09
AP1S3-205ENST00000415298 RNF152Q8N8N0 203 aa15.64■□□□□ 0.09
AP1S3-205ENST00000415298 Q8N8P6 123 aa15.64■□□□□ 0.09
AP1S3-205ENST00000415298 TRAV3A0A0B4J244 114 aa15.63■□□□□ 0.09
AP1S3-205ENST00000415298 ATOX1O00244 68 aa15.63■□□□□ 0.09
AP1S3-205ENST00000415298 COX7A2P2O60397 106 aa15.63■□□□□ 0.09
AP1S3-205ENST00000415298 TCRAP04437 139 aa15.63■□□□□ 0.09
AP1S3-205ENST00000415298 Q86TA4 180 aa15.63■□□□□ 0.09
AP1S3-205ENST00000415298 SHANK2-AS3Q9BTD1 123 aa15.63■□□□□ 0.09
AP1S3-205ENST00000415298 AGPAT4-IT1Q9H0P7 198 aa15.63■□□□□ 0.09
AP1S3-205ENST00000415298 DSCAML1Q8TD84 2053 aa15.63■□□□□ 0.09
AP1S3-205ENST00000415298 SMKR1H3BMG3 65 aa15.62■□□□□ 0.09
AP1S3-205ENST00000415298 ACYP1P07311 99 aa15.62■□□□□ 0.09
AP1S3-205ENST00000415298 C10orf113Q5VZT2 155 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms