RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 TRBV6-1A0A0K0K1D8 114 aa11.36□□□□□ -0.59
LINC00116-201ENST00000414416 HLA-DRB4P13762 266 aa11.36□□□□□ -0.59
LINC00116-201ENST00000414416 STHQ8IWL8 128 aa11.36□□□□□ -0.59
LINC00116-201ENST00000414416 Q8TAT8 98 aa11.36□□□□□ -0.59
LINC00116-201ENST00000414416 ZC2HC1AQ96GY0 325 aa11.36□□□□□ -0.59
LINC00116-201ENST00000414416 KCNS1Q96KK3 526 aa11.36□□□□□ -0.59
LINC00116-201ENST00000414416 IL36BQ9NZH7 164 aa11.36□□□□□ -0.59
LINC00116-201ENST00000414416 HLA-DRB4X5D2U9 266 aa11.36□□□□□ -0.59
LINC00116-201ENST00000414416 DNAH3Q8TD57 4116 aa11.36□□□□□ -0.59
LINC00116-201ENST00000414416 SERTM2A0A1B0GWG4 89 aa11.36□□□□□ -0.59
LINC00116-201ENST00000414416 PRB2P02812 416 aaPredicted RBP11.36□□□□□ -0.59
LINC00116-201ENST00000414416 RBAKDNA6NC62 111 aa11.35□□□□□ -0.59
LINC00116-201ENST00000414416 H3BMM0 161 aa11.35□□□□□ -0.59
LINC00116-201ENST00000414416 DUSP14O95147 198 aaKnown RBP11.35□□□□□ -0.59
LINC00116-201ENST00000414416 WDR73Q6P4I2 378 aa11.35□□□□□ -0.59
LINC00116-201ENST00000414416 FAM231DQ6ZW35 169 aa11.35□□□□□ -0.59
LINC00116-201ENST00000414416 BORCS7Q96B45 105 aa11.35□□□□□ -0.59
LINC00116-201ENST00000414416 TRAV9-2A0A087WT02 112 aa11.34□□□□□ -0.59
LINC00116-201ENST00000414416 C19orf71A6NCJ1 209 aa11.34□□□□□ -0.59
LINC00116-201ENST00000414416 AMTP48728 403 aa11.34□□□□□ -0.59
LINC00116-201ENST00000414416 CRIP1P50238 77 aa11.34□□□□□ -0.59
LINC00116-201ENST00000414416 TCL1AP56279 114 aa11.34□□□□□ -0.59
LINC00116-201ENST00000414416 NOTCH1P46531 2555 aa11.34□□□□□ -0.59
LINC00116-201ENST00000414416 NPIPB6E9PJ23 425 aa11.34□□□□□ -0.59
LINC00116-201ENST00000414416 IGKV3-20P01619 116 aa11.34□□□□□ -0.59
LINC00116-201ENST00000414416 FRMD6-AS1P0C7T7 363 aa11.34□□□□□ -0.59
LINC00116-201ENST00000414416 IGHV4-30-4P0DP06 118 aa11.34□□□□□ -0.59
LINC00116-201ENST00000414416 C9orf47Q6ZRZ4 202 aa11.34□□□□□ -0.59
LINC00116-201ENST00000414416 GNB1LQ9BYB4 327 aa11.34□□□□□ -0.59
LINC00116-201ENST00000414416 AGRNO00468 2067 aa11.33□□□□□ -0.6
LINC00116-201ENST00000414416 NBEAL1Q6ZS30 2694 aa11.33□□□□□ -0.6
LINC00116-201ENST00000414416 TMEM78Q5T7P6 136 aa11.33□□□□□ -0.6
LINC00116-201ENST00000414416 TRPT1Q86TN4 253 aaKnown RBP11.33□□□□□ -0.6
LINC00116-201ENST00000414416 AGPAT4-IT1Q9H0P7 198 aa11.33□□□□□ -0.6
LINC00116-201ENST00000414416 GAGE12BA1L429 117 aa11.32□□□□□ -0.6
LINC00116-201ENST00000414416 LINC00477Q96M19 166 aa11.32□□□□□ -0.6
LINC00116-201ENST00000414416 ZNF492Q9P255 531 aa11.32□□□□□ -0.6
LINC00116-201ENST00000414416 A6NJY4 79 aa11.32□□□□□ -0.6
LINC00116-201ENST00000414416 SPINK4O60575 86 aa11.32□□□□□ -0.6
LINC00116-201ENST00000414416 ZNF324O75467 553 aaPredicted RBP11.32□□□□□ -0.6
LINC00116-201ENST00000414416 TAX1BP3O14907 124 aa11.31□□□□□ -0.6
LINC00116-201ENST00000414416 C3orf79P0CE67 100 aa11.31□□□□□ -0.6
LINC00116-201ENST00000414416 RPL35AP18077 110 aaKnown RBP11.31□□□□□ -0.6
LINC00116-201ENST00000414416 Q6ZVH6 145 aa11.31□□□□□ -0.6
LINC00116-201ENST00000414416 CLUHP3Q96NS8 147 aa11.31□□□□□ -0.6
LINC00116-201ENST00000414416 A0A1B0GV72 72 aa11.31□□□□□ -0.6
LINC00116-201ENST00000414416 SMIM27A0A1W2PRY6 76 aa11.31□□□□□ -0.6
LINC00116-201ENST00000414416 K7EIL1 84 aa11.31□□□□□ -0.6
LINC00116-201ENST00000414416 CT45A10P0DMU9 189 aa11.31□□□□□ -0.6
LINC00116-201ENST00000414416 ZNF80P51504 273 aaPredicted RBP11.31□□□□□ -0.6
LINC00116-201ENST00000414416 ZNF138P52744 262 aa11.31□□□□□ -0.6
LINC00116-201ENST00000414416 LOC102724200A0A096LPH7 203 aaPredicted RBP11.3□□□□□ -0.6
LINC00116-201ENST00000414416 RBMY1BA6NDE4 496 aaKnown RBP11.3□□□□□ -0.6
LINC00116-201ENST00000414416 RBMY1EA6NEQ0 496 aaKnown RBP11.3□□□□□ -0.6
LINC00116-201ENST00000414416 FBLL1A6NHQ2 334 aaKnown RBP11.3□□□□□ -0.6
LINC00116-201ENST00000414416 A8MTW9 85 aa11.3□□□□□ -0.6
LINC00116-201ENST00000414416 A8MZ25 164 aa11.3□□□□□ -0.6
LINC00116-201ENST00000414416 P01737 135 aa11.3□□□□□ -0.6
LINC00116-201ENST00000414416 RBMY1DP0C7P1 496 aaKnown RBP11.3□□□□□ -0.6
LINC00116-201ENST00000414416 DAZAP1Q96EP5 407 aaKnown RBP11.3□□□□□ -0.6
LINC00116-201ENST00000414416 AMTNQ6UX39 209 aa11.29□□□□□ -0.6
LINC00116-201ENST00000414416 RPP21Q9H633 154 aaKnown RBP11.29□□□□□ -0.6
LINC00116-201ENST00000414416 SNURFLB1AK76 121 aa11.29□□□□□ -0.6
LINC00116-201ENST00000414416 ODF3Q96PU9 254 aa11.29□□□□□ -0.6
LINC00116-201ENST00000414416 ST20Q9HBF5 79 aa11.29□□□□□ -0.6
LINC00116-201ENST00000414416 GTF2H5Q6ZYL4 71 aa11.28□□□□□ -0.6
LINC00116-201ENST00000414416 TSKUQ8WUA8 353 aa11.28□□□□□ -0.6
LINC00116-201ENST00000414416 LENEPQ9Y5L5 61 aa11.28□□□□□ -0.6
LINC00116-201ENST00000414416 M0R2Z0 102 aa11.28□□□□□ -0.6
LINC00116-201ENST00000414416 FXYD7P58549 80 aa11.28□□□□□ -0.6
LINC00116-201ENST00000414416 SPINK13Q1W4C9 94 aa11.28□□□□□ -0.6
LINC00116-201ENST00000414416 DEFB121Q5J5C9 76 aa11.28□□□□□ -0.6
LINC00116-201ENST00000414416 AMMECR1LQ6DCA0 310 aa11.28□□□□□ -0.6
LINC00116-201ENST00000414416 CFAP161Q6P656 301 aa11.28□□□□□ -0.6
LINC00116-201ENST00000414416 MORN3Q6PF18 240 aaPredicted RBP11.28□□□□□ -0.6
LINC00116-201ENST00000414416 COX8CQ7Z4L0 72 aa11.28□□□□□ -0.6
LINC00116-201ENST00000414416 NUP35Q8NFH5 326 aa11.28□□□□□ -0.6
LINC00116-201ENST00000414416 GTSF1Q8WW33 167 aa11.28□□□□□ -0.6
LINC00116-201ENST00000414416 FAM19A4Q96LR4 140 aa11.28□□□□□ -0.6
LINC00116-201ENST00000414416 NDFIP1Q9BT67 221 aa11.28□□□□□ -0.6
LINC00116-201ENST00000414416 TRBV7-9A0A0J9YWB2 115 aa11.27□□□□□ -0.61
LINC00116-201ENST00000414416 SH2D1AO60880 128 aa11.27□□□□□ -0.61
LINC00116-201ENST00000414416 PMCHP20382 165 aa11.27□□□□□ -0.61
LINC00116-201ENST00000414416 LEPP41159 167 aa11.27□□□□□ -0.61
LINC00116-201ENST00000414416 APOC4P55056 127 aa11.27□□□□□ -0.61
LINC00116-201ENST00000414416 HIGD1CA8MV81 97 aa11.26□□□□□ -0.61
LINC00116-201ENST00000414416 SMIM17P0DL12 118 aa11.26□□□□□ -0.61
LINC00116-201ENST00000414416 MRPL54Q6P161 138 aaKnown RBP11.26□□□□□ -0.61
LINC00116-201ENST00000414416 FER1L6-AS1Q8NA97 138 aa11.26□□□□□ -0.61
LINC00116-201ENST00000414416 KIR2DL5BQ8NHK3 375 aa11.26□□□□□ -0.61
LINC00116-201ENST00000414416 J3KRW8 73 aa11.26□□□□□ -0.61
LINC00116-201ENST00000414416 BVES-AS1Q5T3Y7 98 aa11.26□□□□□ -0.61
LINC00116-201ENST00000414416 Q6ZQT7 251 aa11.26□□□□□ -0.61
LINC00116-201ENST00000414416 TMSB15BA0A087X1C1 80 aa11.25□□□□□ -0.61
LINC00116-201ENST00000414416 HLA-DQA1P01909 254 aa11.25□□□□□ -0.61
LINC00116-201ENST00000414416 FAM162BQ5T6X4 162 aa11.25□□□□□ -0.61
LINC00116-201ENST00000414416 ZNF575Q86XF7 245 aa11.25□□□□□ -0.61
LINC00116-201ENST00000414416 MRAPQ8TCY5 172 aa11.25□□□□□ -0.61
LINC00116-201ENST00000414416 NAT8BQ9UHF3 227 aa11.25□□□□□ -0.61
LINC00116-201ENST00000414416 TRAV12-2A0A075B6T6 113 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms