RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 IGHV3-49A0A0A0MS15 119 aa7.46□□□□□ -1.21
DDB1-202ENST00000414411 IGHV3-74A0A0B4J1X5 117 aa7.46□□□□□ -1.21
DDB1-202ENST00000414411 GAGE10A6NGK3 116 aa7.46□□□□□ -1.21
DDB1-202ENST00000414411 LINC00614P0C842 121 aa7.46□□□□□ -1.21
DDB1-202ENST00000414411 PMCHL1Q16048 86 aa7.46□□□□□ -1.21
DDB1-202ENST00000414411 ZNF493Q6ZR52 646 aa7.46□□□□□ -1.21
DDB1-202ENST00000414411 SLC50A1Q9BRV3 221 aa7.46□□□□□ -1.21
DDB1-202ENST00000414411 CDIP1Q9H305 208 aa7.46□□□□□ -1.21
DDB1-202ENST00000414411 TMSB15BA0A087X1C1 80 aa7.46□□□□□ -1.22
DDB1-202ENST00000414411 ZNF80P51504 273 aaPredicted RBP7.46□□□□□ -1.22
DDB1-202ENST00000414411 LYZL1Q6UWQ5 148 aa7.46□□□□□ -1.22
DDB1-202ENST00000414411 IGHV3-66A0A0C4DH42 116 aa7.45□□□□□ -1.22
DDB1-202ENST00000414411 RBAKDNA6NC62 111 aa7.45□□□□□ -1.22
DDB1-202ENST00000414411 PRAC2D3DTV9 90 aa7.45□□□□□ -1.22
DDB1-202ENST00000414411 RPS20P60866 119 aaKnown RBP7.45□□□□□ -1.22
DDB1-202ENST00000414411 DEFB114Q30KQ6 69 aa7.45□□□□□ -1.22
DDB1-202ENST00000414411 RNF182Q8N6D2 247 aa7.45□□□□□ -1.22
DDB1-202ENST00000414411 TMEM70Q9BUB7 260 aa7.45□□□□□ -1.22
DDB1-202ENST00000414411 CRXO43186 299 aaPredicted RBP7.44□□□□□ -1.22
DDB1-202ENST00000414411 WIPF1O43516 503 aa7.44□□□□□ -1.22
DDB1-202ENST00000414411 IGLV1-51P01701 117 aa7.44□□□□□ -1.22
DDB1-202ENST00000414411 ATOH7Q8N100 152 aa7.44□□□□□ -1.22
DDB1-202ENST00000414411 MCRIP2Q9BUT9 160 aaKnown RBP7.44□□□□□ -1.22
DDB1-202ENST00000414411 TRAV8-2A0A0B4J237 113 aa7.44□□□□□ -1.22
DDB1-202ENST00000414411 LEPROTL1O95214 131 aa7.44□□□□□ -1.22
DDB1-202ENST00000414411 OR5AL1P0C617 328 aa7.44□□□□□ -1.22
DDB1-202ENST00000414411 IGLC6P0CF74 106 aa7.44□□□□□ -1.22
DDB1-202ENST00000414411 IGLC3P0DOY3 106 aa7.44□□□□□ -1.22
DDB1-202ENST00000414411 INSL3P51460 131 aa7.44□□□□□ -1.22
DDB1-202ENST00000414411 ZNF138P52744 262 aa7.44□□□□□ -1.22
DDB1-202ENST00000414411 ERCC8Q13216 396 aa7.44□□□□□ -1.22
DDB1-202ENST00000414411 SPATA12Q7Z6I5 190 aa7.44□□□□□ -1.22
DDB1-202ENST00000414411 FER1L6-AS1Q8NA97 138 aa7.44□□□□□ -1.22
DDB1-202ENST00000414411 MRPL53Q96EL3 112 aaKnown RBP7.44□□□□□ -1.22
DDB1-202ENST00000414411 UQCR10Q9UDW1 63 aa7.44□□□□□ -1.22
DDB1-202ENST00000414411 IGLL1P15814 213 aa7.43□□□□□ -1.22
DDB1-202ENST00000414411 G0S2P27469 103 aa7.43□□□□□ -1.22
DDB1-202ENST00000414411 NUTF2P61970 127 aaKnown RBP7.43□□□□□ -1.22
DDB1-202ENST00000414411 FAM104BQ5XKR9 115 aa7.43□□□□□ -1.22
DDB1-202ENST00000414411 LINC00173Q6ZV60 143 aa7.43□□□□□ -1.22
DDB1-202ENST00000414411 ZNF575Q86XF7 245 aa7.43□□□□□ -1.22
DDB1-202ENST00000414411 SELENOKQ9Y6D0 94 aa7.43□□□□□ -1.22
DDB1-202ENST00000414411 TRAV9-2A0A087WT02 112 aa7.42□□□□□ -1.22
DDB1-202ENST00000414411 TRAV25A0A0B4J276 109 aa7.42□□□□□ -1.22
DDB1-202ENST00000414411 FABP5P3A8MUU1 101 aa7.42□□□□□ -1.22
DDB1-202ENST00000414411 SYS1-DBNDD2H3BUS1 97 aa7.42□□□□□ -1.22
DDB1-202ENST00000414411 CD300EQ496F6 205 aaPredicted RBP7.42□□□□□ -1.22
DDB1-202ENST00000414411 C9orf66Q5T8R8 295 aa7.42□□□□□ -1.22
DDB1-202ENST00000414411 AMN1Q8IY45 258 aa7.42□□□□□ -1.22
DDB1-202ENST00000414411 TMEM61Q8N0U2 210 aa7.42□□□□□ -1.22
DDB1-202ENST00000414411 CNFNQ9BYD5 112 aa7.42□□□□□ -1.22
DDB1-202ENST00000414411 AP5S1Q9NUS5 200 aa7.42□□□□□ -1.22
DDB1-202ENST00000414411 U3KQK5 164 aa7.42□□□□□ -1.22
DDB1-202ENST00000414411 DNAH3Q8TD57 4116 aa7.42□□□□□ -1.22
DDB1-202ENST00000414411 C20orf202A1L168 122 aa7.42□□□□□ -1.22
DDB1-202ENST00000414411 D6R8Y8 96 aa7.42□□□□□ -1.22
DDB1-202ENST00000414411 MUC21A0A0G2JKD1 596 aa7.41□□□□□ -1.22
DDB1-202ENST00000414411 MUC21A0A140T8X8 626 aa7.41□□□□□ -1.22
DDB1-202ENST00000414411 ORM1P02763 201 aa7.41□□□□□ -1.22
DDB1-202ENST00000414411 MUC21Q5SSG8 566 aa7.41□□□□□ -1.22
DDB1-202ENST00000414411 FA2HQ7L5A8 372 aa7.41□□□□□ -1.22
DDB1-202ENST00000414411 ORMDL3Q8N138 153 aa7.41□□□□□ -1.22
DDB1-202ENST00000414411 OR2K2Q8NGT1 345 aa7.41□□□□□ -1.22
DDB1-202ENST00000414411 DYNLRB2Q8TF09 96 aa7.41□□□□□ -1.22
DDB1-202ENST00000414411 AGPAT4-IT1Q9H0P7 198 aa7.41□□□□□ -1.22
DDB1-202ENST00000414411 GEMIN7Q9H840 131 aaKnown RBP7.41□□□□□ -1.22
DDB1-202ENST00000414411 HSPB8Q9UJY1 196 aa7.41□□□□□ -1.22
DDB1-202ENST00000414411 OR4C46A6NHA9 309 aa7.4□□□□□ -1.22
DDB1-202ENST00000414411 TWIST1Q15672 202 aa7.4□□□□□ -1.22
DDB1-202ENST00000414411 MRPL51Q4U2R6 128 aaKnown RBP7.4□□□□□ -1.22
DDB1-202ENST00000414411 TMEM78Q5T7P6 136 aa7.4□□□□□ -1.22
DDB1-202ENST00000414411 Q6ZN92 141 aa7.4□□□□□ -1.22
DDB1-202ENST00000414411 C9orf47Q6ZRZ4 202 aa7.4□□□□□ -1.22
DDB1-202ENST00000414411 PRSS3P2Q8NHM4 247 aa7.4□□□□□ -1.22
DDB1-202ENST00000414411 PRELID3AQ96N28 172 aa7.4□□□□□ -1.22
DDB1-202ENST00000414411 FAM110AQ9BQ89 295 aa7.4□□□□□ -1.22
DDB1-202ENST00000414411 MAP1LC3CQ9BXW4 147 aa7.4□□□□□ -1.22
DDB1-202ENST00000414411 HNRNPA3P51991 378 aaKnown RBP7.4□□□□□ -1.23
DDB1-202ENST00000414411 HIST1H1AQ02539 215 aaPredicted RBP7.4□□□□□ -1.23
DDB1-202ENST00000414411 OR10AG1Q8NH19 301 aa7.4□□□□□ -1.23
DDB1-202ENST00000414411 DCANP1Q8TF63 244 aa7.4□□□□□ -1.23
DDB1-202ENST00000414411 TMEM191AQ9H0A3 160 aa7.4□□□□□ -1.23
DDB1-202ENST00000414411 MS4A6AQ9H2W1 248 aa7.4□□□□□ -1.23
DDB1-202ENST00000414411 ZNF256Q9Y2P7 627 aaPredicted RBP7.4□□□□□ -1.23
DDB1-202ENST00000414411 SOCS3O14543 225 aa7.39□□□□□ -1.23
DDB1-202ENST00000414411 IFI27P40305 119 aaPredicted RBP7.39□□□□□ -1.23
DDB1-202ENST00000414411 RPL11P62913 178 aaKnown RBP7.39□□□□□ -1.23
DDB1-202ENST00000414411 SPAG8Q99932 426 aaPredicted RBP7.39□□□□□ -1.23
DDB1-202ENST00000414411 IGKV3-7A0A075B6H7 116 aa7.39□□□□□ -1.23
DDB1-202ENST00000414411 A0A096LNJ9 63 aa7.39□□□□□ -1.23
DDB1-202ENST00000414411 TRAV2A0A0B4J234 112 aa7.39□□□□□ -1.23
DDB1-202ENST00000414411 IGKV3D-20A0A0C4DH25 116 aa7.39□□□□□ -1.23
DDB1-202ENST00000414411 K7EQG2 157 aa7.39□□□□□ -1.23
DDB1-202ENST00000414411 TSPOP30536 169 aa7.39□□□□□ -1.23
DDB1-202ENST00000414411 EGFEM1PQ0D2K5 195 aa7.39□□□□□ -1.23
DDB1-202ENST00000414411 BEAN1Q3B7T3 259 aa7.39□□□□□ -1.23
DDB1-202ENST00000414411 LCE2AQ5TA79 106 aaPredicted RBP7.39□□□□□ -1.23
DDB1-202ENST00000414411 ERASQ7Z444 233 aa7.39□□□□□ -1.23
DDB1-202ENST00000414411 MSRB1Q9NZV6 116 aa7.39□□□□□ -1.23
DDB1-202ENST00000414411 C11orf21Q9P2W6 132 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms