RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 COL18A1P39060 1754 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 E9PCH4 1651 aa2.53□□□□□ -2
SF3B1-203ENST00000414174 CD163L1Q9NR16 1453 aa2.52□□□□□ -2.01
SF3B1-203ENST00000414174 MYO5AQ9Y4I1 1855 aaKnown RBP2.52□□□□□ -2.01
SF3B1-203ENST00000414174 KIAA1671Q9BY89 1806 aa2.52□□□□□ -2.01
SF3B1-203ENST00000414174 STRCP1A6NGW2 1772 aa2.52□□□□□ -2.01
SF3B1-203ENST00000414174 FMN2Q9NZ56 1722 aa2.52□□□□□ -2.01
SF3B1-203ENST00000414174 IGHV1OR15-9A0A0B4J2B8 117 aa2.52□□□□□ -2.01
SF3B1-203ENST00000414174 TRBV10-2A0A0K0K1G8 114 aa2.52□□□□□ -2.01
SF3B1-203ENST00000414174 C16orf90A8MZG2 172 aa2.52□□□□□ -2.01
SF3B1-203ENST00000414174 C16orf97H3BN30 126 aa2.52□□□□□ -2.01
SF3B1-203ENST00000414174 HMGN2P05204 90 aaKnown RBP2.52□□□□□ -2.01
SF3B1-203ENST00000414174 RPRMLQ8N4K4 120 aa2.52□□□□□ -2.01
SF3B1-203ENST00000414174 NPBQ8NG41 125 aa2.52□□□□□ -2.01
SF3B1-203ENST00000414174 MPLKIPQ8TAP9 179 aa2.52□□□□□ -2.01
SF3B1-203ENST00000414174 CAMK2N2Q96S95 79 aa2.52□□□□□ -2.01
SF3B1-203ENST00000414174 SMIM7Q9BQ49 75 aa2.52□□□□□ -2.01
SF3B1-203ENST00000414174 PLA2G12AQ9BZM1 189 aa2.52□□□□□ -2.01
SF3B1-203ENST00000414174 FGF23Q9GZV9 251 aaPredicted RBP2.52□□□□□ -2.01
SF3B1-203ENST00000414174 IL25Q9H293 177 aa2.52□□□□□ -2.01
SF3B1-203ENST00000414174 PHLDA3Q9Y5J5 127 aa2.52□□□□□ -2.01
SF3B1-203ENST00000414174 CASP8AP2Q9UKL3 1982 aa2.52□□□□□ -2.01
SF3B1-203ENST00000414174 DOCK1Q14185 1865 aa2.52□□□□□ -2.01
SF3B1-203ENST00000414174 EML6Q6ZMW3 1958 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 TRAV7A0A075B6U4 112 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 IGHV4OR15-8A0A075B7B6 117 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 TRAV1-2A0A0B4J238 106 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 IQCF6A8MYZ5 107 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 LEPROTL1O95214 131 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 CGB3P0DN86 165 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 CGB7P0DN87 165 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 KRTAP10-5P60370 271 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 C2orf83Q53S99 150 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 Q6JHZ5 121 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 C9orf47Q6ZRZ4 202 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 FAM19A2Q8N3H0 131 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 PRAC1Q96KF2 57 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 FAM167A-AS1Q96KT0 104 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 SMIM14Q96QK8 99 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 LINC00467Q9BRT7 94 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 TTTY13Q9BZ97 58 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 GNG13Q9P2W3 67 aa2.51□□□□□ -2.01
SF3B1-203ENST00000414174 TRBV25-1A0A075B6N4 114 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 A0A087WW49 117 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 IGLV3-32A0A0A0MS00 114 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 RPL37AP8A6NKH3 93 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 CEBPZOSA8MTT3 80 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 C11orf94C9JXX5 98 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 IGLV1-51P01701 117 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 IGLV2-23P01705 113 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 MIFP14174 115 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 IFI27P40305 119 aaPredicted RBP2.5□□□□□ -2.01
SF3B1-203ENST00000414174 UBE2D1P51668 147 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 CAV3P56539 151 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 C9orf116Q5BN46 136 aaPredicted RBP2.5□□□□□ -2.01
SF3B1-203ENST00000414174 ZCCHC23Q6ZST2 131 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 C7orf33Q8WU49 177 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 RETNLBQ9BQ08 111 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 BPESC1Q9GZL8 116 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 LINC00574Q9H8X3 128 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 C8orf17Q9NRJ1 99 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 PRO1854Q9UHT4 67 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 NOTCH4Q99466 2003 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 SCN8AQ9UQD0 1980 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 UBR1Q8IWV7 1749 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 FAM208AQ9UK61 1670 aaKnown RBP2.5□□□□□ -2.01
SF3B1-203ENST00000414174 PAPPAQ13219 1627 aa2.5□□□□□ -2.01
SF3B1-203ENST00000414174 TSC2P49815 1807 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 NUP98P52948 1817 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 ARFGEF1Q9Y6D6 1849 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 SAMD9LQ8IVG5 1584 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 LOC285556D6RIA3 1793 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 MAST2Q6P0Q8 1798 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 WDR90Q96KV7 1748 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 IGLV1-50A0A075B6I6 118 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 IGLV4-3A0A075B6K6 122 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 IGHV3-21A0A0B4J1V1 117 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 IGHV5-51A0A0C4DH38 117 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 IGHV7-4-1A0A0J9YVY3 117 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 FAM223BA6NKX1 122 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 C17orf51A8MQB3 221 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 SOCS3O14543 225 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 IGHV1-69P01742 117 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 MT3P25713 68 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 SUPT4H1P63272 117 aaKnown RBP2.49□□□□□ -2.01
SF3B1-203ENST00000414174 MIAQ16674 131 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 C9orf66Q5T8R8 295 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 ZNF826PQ6ZT77 177 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 CLECL1Q8IZS7 167 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 C20orf197Q8N268 126 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 Q8N814 137 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 CNEP1R1Q8N9A8 125 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 TMEM190Q8WZ59 177 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 ZNF414Q96IQ9 312 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 C1orf147Q96MC9 270 aaPredicted RBP2.49□□□□□ -2.01
SF3B1-203ENST00000414174 FER1L5A0AVI2 2057 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 ATG2BQ96BY7 2078 aa2.49□□□□□ -2.01
SF3B1-203ENST00000414174 MED12LQ86YW9 2145 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 SLIT1O75093 1534 aa2.48□□□□□ -2.01
SF3B1-203ENST00000414174 OBSL1O75147 1896 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms