RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 FUSP35637 526 aaKnown RBP eCLIP11.4□□□□□ -0.58
COL6A2-205ENST00000413758 LGALSLQ3ZCW2 172 aaPredicted RBP11.4□□□□□ -0.58
COL6A2-205ENST00000413758 OR10J3Q5JRS4 329 aa11.4□□□□□ -0.58
COL6A2-205ENST00000413758 NKX6-2Q9C056 277 aaPredicted RBP11.4□□□□□ -0.58
COL6A2-205ENST00000413758 MAP1LC3BQ9GZQ8 125 aa11.4□□□□□ -0.58
COL6A2-205ENST00000413758 PGPEP1Q9NXJ5 209 aa11.4□□□□□ -0.58
COL6A2-205ENST00000413758 FAM74A7A6NL05 159 aa11.39□□□□□ -0.59
COL6A2-205ENST00000413758 RNASE3P12724 160 aaKnown RBP11.39□□□□□ -0.59
COL6A2-205ENST00000413758 ASIPP42127 132 aa11.39□□□□□ -0.59
COL6A2-205ENST00000413758 Q86TA4 180 aa11.39□□□□□ -0.59
COL6A2-205ENST00000413758 IGHV3-38A0A0C4DH36 116 aa11.38□□□□□ -0.59
COL6A2-205ENST00000413758 TRBV6-4A0A1B0GX49 114 aa11.38□□□□□ -0.59
COL6A2-205ENST00000413758 B4DEV8 164 aa11.38□□□□□ -0.59
COL6A2-205ENST00000413758 SMLR1H3BR10 107 aa11.38□□□□□ -0.59
COL6A2-205ENST00000413758 PSCAO43653 123 aa11.38□□□□□ -0.59
COL6A2-205ENST00000413758 TIRAPP58753 221 aa11.38□□□□□ -0.59
COL6A2-205ENST00000413758 UBE2G1P62253 170 aa11.38□□□□□ -0.59
COL6A2-205ENST00000413758 CST9LP1Q5W188 147 aa11.38□□□□□ -0.59
COL6A2-205ENST00000413758 STOML3Q8TAV4 291 aa11.38□□□□□ -0.59
COL6A2-205ENST00000413758 HIST1H2BAQ96A08 127 aa11.38□□□□□ -0.59
COL6A2-205ENST00000413758 PTH2Q96A98 100 aa11.38□□□□□ -0.59
COL6A2-205ENST00000413758 A0A087WTM6 91 aa11.37□□□□□ -0.59
COL6A2-205ENST00000413758 IGKV3D-20A0A0C4DH25 116 aa11.37□□□□□ -0.59
COL6A2-205ENST00000413758 MGST1P10620 155 aaKnown RBP11.37□□□□□ -0.59
COL6A2-205ENST00000413758 SCRT2Q9NQ03 307 aa11.37□□□□□ -0.59
COL6A2-205ENST00000413758 A8MWV9 139 aa11.36□□□□□ -0.59
COL6A2-205ENST00000413758 G3V3Q6 166 aa11.36□□□□□ -0.59
COL6A2-205ENST00000413758 M0R036 132 aa11.36□□□□□ -0.59
COL6A2-205ENST00000413758 IGHV3-30P01768 117 aa11.36□□□□□ -0.59
COL6A2-205ENST00000413758 IGHV3-33P01772 117 aa11.36□□□□□ -0.59
COL6A2-205ENST00000413758 IGHV3-30-3P0DP02 117 aa11.36□□□□□ -0.59
COL6A2-205ENST00000413758 IGHV3-30-5P0DP03 117 aa11.36□□□□□ -0.59
COL6A2-205ENST00000413758 ATP6V0E2Q8NHE4 81 aa11.36□□□□□ -0.59
COL6A2-205ENST00000413758 CYTL1Q9NRR1 136 aa11.36□□□□□ -0.59
COL6A2-205ENST00000413758 H3BVH4 76 aa11.35□□□□□ -0.59
COL6A2-205ENST00000413758 CDPF1Q6NVV7 123 aa11.35□□□□□ -0.59
COL6A2-205ENST00000413758 Q8N1X5 172 aa11.35□□□□□ -0.59
COL6A2-205ENST00000413758 SYT8Q8NBV8 401 aa11.35□□□□□ -0.59
COL6A2-205ENST00000413758 ZC2HC1AQ96GY0 325 aa11.35□□□□□ -0.59
COL6A2-205ENST00000413758 FMC1Q96HJ9 113 aa11.35□□□□□ -0.59
COL6A2-205ENST00000413758 GTSF1LQ9H1H1 148 aa11.35□□□□□ -0.59
COL6A2-205ENST00000413758 PARLQ9H300 379 aa11.35□□□□□ -0.59
COL6A2-205ENST00000413758 Q9HAA7 133 aa11.35□□□□□ -0.59
COL6A2-205ENST00000413758 ZFP30Q9Y2G7 519 aa11.35□□□□□ -0.59
COL6A2-205ENST00000413758 BOLA1Q9Y3E2 137 aa11.35□□□□□ -0.59
COL6A2-205ENST00000413758 LRP1BQ9NZR2 4599 aa11.35□□□□□ -0.59
COL6A2-205ENST00000413758 HSPG2P98160 4391 aa11.34□□□□□ -0.59
COL6A2-205ENST00000413758 GRIFINA4D1Z8 144 aa11.34□□□□□ -0.59
COL6A2-205ENST00000413758 GAGE12JA6NER3 117 aa11.34□□□□□ -0.59
COL6A2-205ENST00000413758 SH2D1AO60880 128 aa11.34□□□□□ -0.59
COL6A2-205ENST00000413758 GAGE1Q13065 139 aa11.34□□□□□ -0.59
COL6A2-205ENST00000413758 GAGE4Q13068 117 aa11.34□□□□□ -0.59
COL6A2-205ENST00000413758 GAGE5Q13069 117 aa11.34□□□□□ -0.59
COL6A2-205ENST00000413758 GAGE13Q4V321 117 aa11.34□□□□□ -0.59
COL6A2-205ENST00000413758 LINC01556Q5JQF7 62 aa11.34□□□□□ -0.59
COL6A2-205ENST00000413758 FAM162BQ5T6X4 162 aa11.34□□□□□ -0.59
COL6A2-205ENST00000413758 LELP1Q5T871 98 aa11.34□□□□□ -0.59
COL6A2-205ENST00000413758 ABCA13Q86UQ4 5058 aa11.33□□□□□ -0.6
COL6A2-205ENST00000413758 TMSB15BA0A087X1C1 80 aa11.33□□□□□ -0.6
COL6A2-205ENST00000413758 A0A1B0GV50 99 aa11.33□□□□□ -0.6
COL6A2-205ENST00000413758 AKR1C3P42330 323 aa11.33□□□□□ -0.6
COL6A2-205ENST00000413758 FHITP49789 147 aa11.33□□□□□ -0.6
COL6A2-205ENST00000413758 ZFP2Q6ZN57 461 aa11.33□□□□□ -0.6
COL6A2-205ENST00000413758 Q6ZSN1 163 aa11.33□□□□□ -0.6
COL6A2-205ENST00000413758 OR11H4Q8NGC9 324 aa11.33□□□□□ -0.6
COL6A2-205ENST00000413758 FAM213BQ8TBF2 198 aa11.33□□□□□ -0.6
COL6A2-205ENST00000413758 JPT2Q9H910 190 aa11.33□□□□□ -0.6
COL6A2-205ENST00000413758 IL36BQ9NZH7 164 aa11.33□□□□□ -0.6
COL6A2-205ENST00000413758 KRBOX1C9JBD0 128 aa11.32□□□□□ -0.6
COL6A2-205ENST00000413758 ARMS2P0C7Q2 107 aa11.32□□□□□ -0.6
COL6A2-205ENST00000413758 CRIP1P50238 77 aa11.32□□□□□ -0.6
COL6A2-205ENST00000413758 KCNRGQ8N5I3 272 aa11.32□□□□□ -0.6
COL6A2-205ENST00000413758 SFT2D1Q8WV19 159 aa11.32□□□□□ -0.6
COL6A2-205ENST00000413758 PHLDA3Q9Y5J5 127 aa11.32□□□□□ -0.6
COL6A2-205ENST00000413758 IBA57-AS1B1ANH7 110 aa11.31□□□□□ -0.6
COL6A2-205ENST00000413758 PAGE4O60829 102 aa11.31□□□□□ -0.6
COL6A2-205ENST00000413758 TPT1P13693 172 aaKnown RBP11.31□□□□□ -0.6
COL6A2-205ENST00000413758 PIK3CD-AS1Q5SR53 167 aa11.31□□□□□ -0.6
COL6A2-205ENST00000413758 FAM74A4Q5TZK3 123 aa11.31□□□□□ -0.6
COL6A2-205ENST00000413758 TCEAL7Q9BRU2 100 aa11.31□□□□□ -0.6
COL6A2-205ENST00000413758 ZNF471Q9BX82 626 aaPredicted RBP11.31□□□□□ -0.6
COL6A2-205ENST00000413758 SAMD10Q9BYL1 202 aa11.31□□□□□ -0.6
COL6A2-205ENST00000413758 KANTRA0A1W2PQU2 76 aa11.3□□□□□ -0.6
COL6A2-205ENST00000413758 RHODO00212 210 aa11.3□□□□□ -0.6
COL6A2-205ENST00000413758 DMRTA1Q5VZB9 504 aa11.3□□□□□ -0.6
COL6A2-205ENST00000413758 M0R381 172 aa11.29□□□□□ -0.6
COL6A2-205ENST00000413758 PFDN1O60925 122 aa11.29□□□□□ -0.6
COL6A2-205ENST00000413758 LTAP01374 205 aa11.29□□□□□ -0.6
COL6A2-205ENST00000413758 ZNF345Q14585 488 aa11.29□□□□□ -0.6
COL6A2-205ENST00000413758 C14orf178Q8N769 122 aaPredicted RBP11.29□□□□□ -0.6
COL6A2-205ENST00000413758 A0A087WWL8 130 aa11.28□□□□□ -0.6
COL6A2-205ENST00000413758 A0A0D9SG52 128 aa11.28□□□□□ -0.6
COL6A2-205ENST00000413758 TRBV6-1A0A0K0K1D8 114 aa11.28□□□□□ -0.6
COL6A2-205ENST00000413758 UMAD1C9J7I0 102 aa11.28□□□□□ -0.6
COL6A2-205ENST00000413758 SEC11BP0C7V7 166 aa11.28□□□□□ -0.6
COL6A2-205ENST00000413758 GCSHP23434 173 aa11.28□□□□□ -0.6
COL6A2-205ENST00000413758 KRTAP10-1P60331 282 aa11.28□□□□□ -0.6
COL6A2-205ENST00000413758 ZNF674Q2M3X9 581 aa11.28□□□□□ -0.6
COL6A2-205ENST00000413758 DNLZQ5SXM8 178 aa11.28□□□□□ -0.6
COL6A2-205ENST00000413758 COX8CQ7Z4L0 72 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms