RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 LINC00479Q96M42 142 aa7.94□□□□□ -1.14
LIMS2-210ENST00000413578 SH3BGRL3Q9H299 93 aa7.94□□□□□ -1.14
LIMS2-210ENST00000413578 PARLQ9H300 379 aa7.94□□□□□ -1.14
LIMS2-210ENST00000413578 HSPB11Q9Y547 144 aa7.94□□□□□ -1.14
LIMS2-210ENST00000413578 RNF213Q63HN8 5207 aa7.93□□□□□ -1.14
LIMS2-210ENST00000413578 SERTM2A0A1B0GWG4 89 aa7.93□□□□□ -1.14
LIMS2-210ENST00000413578 GAGE12JA6NER3 117 aa7.93□□□□□ -1.14
LIMS2-210ENST00000413578 GGTLC3B5MD39 225 aa7.93□□□□□ -1.14
LIMS2-210ENST00000413578 TAAR5O14804 337 aa7.93□□□□□ -1.14
LIMS2-210ENST00000413578 IGLV2-8P01709 118 aa7.93□□□□□ -1.14
LIMS2-210ENST00000413578 H2BFSP57053 126 aa7.93□□□□□ -1.14
LIMS2-210ENST00000413578 CYCSP99999 105 aaKnown RBP7.93□□□□□ -1.14
LIMS2-210ENST00000413578 GAGE1Q13065 139 aa7.93□□□□□ -1.14
LIMS2-210ENST00000413578 GAGE4Q13068 117 aa7.93□□□□□ -1.14
LIMS2-210ENST00000413578 GAGE5Q13069 117 aa7.93□□□□□ -1.14
LIMS2-210ENST00000413578 GAGE13Q4V321 117 aa7.93□□□□□ -1.14
LIMS2-210ENST00000413578 PIK3CD-AS1Q5SR53 167 aa7.93□□□□□ -1.14
LIMS2-210ENST00000413578 Q8N976 141 aa7.93□□□□□ -1.14
LIMS2-210ENST00000413578 PLA2G2DQ9UNK4 145 aa7.93□□□□□ -1.14
LIMS2-210ENST00000413578 A0A087WWC5 75 aa7.92□□□□□ -1.14
LIMS2-210ENST00000413578 RBFOX3A6NFN3 312 aa7.92□□□□□ -1.14
LIMS2-210ENST00000413578 GCGP01275 180 aa7.92□□□□□ -1.14
LIMS2-210ENST00000413578 TCRAP04437 139 aa7.92□□□□□ -1.14
LIMS2-210ENST00000413578 RAB2AP61019 212 aa7.92□□□□□ -1.14
LIMS2-210ENST00000413578 ATRAIDQ6UW56 229 aa7.92□□□□□ -1.14
LIMS2-210ENST00000413578 NIT1Q86X76 327 aa7.92□□□□□ -1.14
LIMS2-210ENST00000413578 CYB561D1Q8N8Q1 229 aa7.92□□□□□ -1.14
LIMS2-210ENST00000413578 SUN5Q8TC36 379 aa7.92□□□□□ -1.14
LIMS2-210ENST00000413578 PPP1R1CQ8WVI7 109 aa7.92□□□□□ -1.14
LIMS2-210ENST00000413578 NDFIP1Q9BT67 221 aa7.92□□□□□ -1.14
LIMS2-210ENST00000413578 WFDC1Q9HC57 220 aa7.92□□□□□ -1.14
LIMS2-210ENST00000413578 LRP2P98164 4655 aa7.91□□□□□ -1.14
LIMS2-210ENST00000413578 A8MWV9 139 aa7.91□□□□□ -1.14
LIMS2-210ENST00000413578 ACOT6Q3I5F7 207 aaPredicted RBP7.91□□□□□ -1.14
LIMS2-210ENST00000413578 C5orf17Q8NAS9 161 aa7.91□□□□□ -1.14
LIMS2-210ENST00000413578 SAMD10Q9BYL1 202 aa7.91□□□□□ -1.14
LIMS2-210ENST00000413578 PSG8Q9UQ74 426 aa7.91□□□□□ -1.14
LIMS2-210ENST00000413578 IGKV3D-20A0A0C4DH25 116 aa7.9□□□□□ -1.14
LIMS2-210ENST00000413578 MPC2O95563 127 aa7.9□□□□□ -1.14
LIMS2-210ENST00000413578 RPL12P30050 165 aaKnown RBP7.9□□□□□ -1.14
LIMS2-210ENST00000413578 HNRNPA3P51991 378 aaKnown RBP7.9□□□□□ -1.14
LIMS2-210ENST00000413578 C14orf178Q8N769 122 aaPredicted RBP7.9□□□□□ -1.14
LIMS2-210ENST00000413578 SCGB1C1Q8TD33 95 aa7.9□□□□□ -1.14
LIMS2-210ENST00000413578 RMI2Q96E14 147 aa7.9□□□□□ -1.14
LIMS2-210ENST00000413578 SMIM3Q9BZL3 60 aa7.9□□□□□ -1.14
LIMS2-210ENST00000413578 JPT2Q9H910 190 aa7.9□□□□□ -1.14
LIMS2-210ENST00000413578 IGKV2D-24A0A075B6R9 120 aa7.89□□□□□ -1.15
LIMS2-210ENST00000413578 HMGB3O15347 200 aaKnown RBP7.89□□□□□ -1.15
LIMS2-210ENST00000413578 STAG3L2P0CL84 134 aa7.89□□□□□ -1.15
LIMS2-210ENST00000413578 STAG3L3P0CL85 134 aa7.89□□□□□ -1.15
LIMS2-210ENST00000413578 ARL14EPLP0DKL9 152 aa7.89□□□□□ -1.15
LIMS2-210ENST00000413578 FLI1Q01543 452 aaPredicted RBP7.89□□□□□ -1.15
LIMS2-210ENST00000413578 SMUG1Q53HV7 270 aa7.89□□□□□ -1.15
LIMS2-210ENST00000413578 MZT2BQ6NZ67 158 aa7.89□□□□□ -1.15
LIMS2-210ENST00000413578 OR2T35Q8NGX2 323 aa7.89□□□□□ -1.15
LIMS2-210ENST00000413578 A0A1W2PPV4 95 aa7.88□□□□□ -1.15
LIMS2-210ENST00000413578 SEC11BP0C7V7 166 aa7.88□□□□□ -1.15
LIMS2-210ENST00000413578 FGF8P55075 233 aaPredicted RBP7.88□□□□□ -1.15
LIMS2-210ENST00000413578 OR10G9Q8NGN4 311 aa7.88□□□□□ -1.15
LIMS2-210ENST00000413578 OR10G7Q8NGN6 311 aa7.88□□□□□ -1.15
LIMS2-210ENST00000413578 DAZAP1Q96EP5 407 aaKnown RBP7.88□□□□□ -1.15
LIMS2-210ENST00000413578 CHCHD7Q9BUK0 85 aa7.88□□□□□ -1.15
LIMS2-210ENST00000413578 KLK12Q9UKR0 248 aa7.88□□□□□ -1.15
LIMS2-210ENST00000413578 EPDR1Q9UM22 224 aa7.88□□□□□ -1.15
LIMS2-210ENST00000413578 TNXBP22105 4242 aa7.88□□□□□ -1.15
LIMS2-210ENST00000413578 PET100P0DJ07 73 aa7.87□□□□□ -1.15
LIMS2-210ENST00000413578 MT1HL1P0DM35 61 aa7.87□□□□□ -1.15
LIMS2-210ENST00000413578 LGALSLQ3ZCW2 172 aaPredicted RBP7.87□□□□□ -1.15
LIMS2-210ENST00000413578 DMRTA1Q5VZB9 504 aa7.87□□□□□ -1.15
LIMS2-210ENST00000413578 PRNTQ86SH4 94 aa7.87□□□□□ -1.15
LIMS2-210ENST00000413578 OR2G3Q8NGZ4 309 aa7.87□□□□□ -1.15
LIMS2-210ENST00000413578 UBE2WQ96B02 151 aa7.87□□□□□ -1.15
LIMS2-210ENST00000413578 IL36BQ9NZH7 164 aa7.87□□□□□ -1.15
LIMS2-210ENST00000413578 K7EQM0 130 aa7.86□□□□□ -1.15
LIMS2-210ENST00000413578 GCHFRP30047 84 aa7.86□□□□□ -1.15
LIMS2-210ENST00000413578 ASIPP42127 132 aa7.86□□□□□ -1.15
LIMS2-210ENST00000413578 CDC34P49427 236 aaPredicted RBP7.86□□□□□ -1.15
LIMS2-210ENST00000413578 RPL37AP61513 92 aaKnown RBP7.86□□□□□ -1.15
LIMS2-210ENST00000413578 SUMO1P63165 101 aaKnown RBP7.86□□□□□ -1.15
LIMS2-210ENST00000413578 ZFP69Q49AA0 526 aa7.86□□□□□ -1.15
LIMS2-210ENST00000413578 SAPCD1Q5SSQ6 148 aa7.86□□□□□ -1.15
LIMS2-210ENST00000413578 DNLZQ5SXM8 178 aa7.86□□□□□ -1.15
LIMS2-210ENST00000413578 LINC00299Q6ZSB3 139 aa7.86□□□□□ -1.15
LIMS2-210ENST00000413578 ENKURQ8TC29 256 aa7.86□□□□□ -1.15
LIMS2-210ENST00000413578 INMT-MINDY4F8WBC2 141 aa7.85□□□□□ -1.15
LIMS2-210ENST00000413578 RHODO00212 210 aa7.85□□□□□ -1.15
LIMS2-210ENST00000413578 S100A4P26447 101 aaKnown RBP7.85□□□□□ -1.15
LIMS2-210ENST00000413578 IFITM3Q01628 133 aa7.85□□□□□ -1.15
LIMS2-210ENST00000413578 ENHOQ6UWT2 76 aa7.85□□□□□ -1.15
LIMS2-210ENST00000413578 RAB24Q969Q5 203 aa7.85□□□□□ -1.15
LIMS2-210ENST00000413578 URGCP-MRPS24S4R325 110 aa7.85□□□□□ -1.15
LIMS2-210ENST00000413578 Q0VG73 95 aa7.84□□□□□ -1.15
LIMS2-210ENST00000413578 ELOBQ15370 118 aa7.84□□□□□ -1.15
LIMS2-210ENST00000413578 C14orf177Q52M58 125 aa7.84□□□□□ -1.15
LIMS2-210ENST00000413578 MARVELD1Q9BSK0 173 aa7.84□□□□□ -1.15
LIMS2-210ENST00000413578 A0A087WX48 190 aa7.83□□□□□ -1.16
LIMS2-210ENST00000413578 FABP5P3A8MUU1 101 aa7.83□□□□□ -1.16
LIMS2-210ENST00000413578 H3BVH4 76 aa7.83□□□□□ -1.16
LIMS2-210ENST00000413578 UPK1BO75841 260 aa7.83□□□□□ -1.16
LIMS2-210ENST00000413578 ARMS2P0C7Q2 107 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms