RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 C9orf85Q96MD7 179 aa6.96□□□□□ -1.3
NCKIPSD-202ENST00000413374 SH2D1AO60880 128 aa6.95□□□□□ -1.3
NCKIPSD-202ENST00000413374 H2AFB1P0C5Y9 115 aa6.95□□□□□ -1.3
NCKIPSD-202ENST00000413374 GATA1P15976 413 aaPredicted RBP6.95□□□□□ -1.3
NCKIPSD-202ENST00000413374 ASIPP42127 132 aa6.95□□□□□ -1.3
NCKIPSD-202ENST00000413374 LINC00315P59091 139 aa6.95□□□□□ -1.3
NCKIPSD-202ENST00000413374 LGALSLQ3ZCW2 172 aaPredicted RBP6.95□□□□□ -1.3
NCKIPSD-202ENST00000413374 SLC25A29Q8N8R3 303 aa6.95□□□□□ -1.3
NCKIPSD-202ENST00000413374 JPT2Q9H910 190 aa6.95□□□□□ -1.3
NCKIPSD-202ENST00000413374 ZFP30Q9Y2G7 519 aa6.95□□□□□ -1.3
NCKIPSD-202ENST00000413374 PKHD1P08F94 4074 aa6.95□□□□□ -1.3
NCKIPSD-202ENST00000413374 RYR1P21817 5038 aa6.94□□□□□ -1.3
NCKIPSD-202ENST00000413374 LRP1BQ9NZR2 4599 aa6.94□□□□□ -1.3
NCKIPSD-202ENST00000413374 A0A1W2PPQ1 181 aa6.94□□□□□ -1.3
NCKIPSD-202ENST00000413374 C16orf90A8MZG2 172 aa6.94□□□□□ -1.3
NCKIPSD-202ENST00000413374 UMAD1C9J7I0 102 aa6.94□□□□□ -1.3
NCKIPSD-202ENST00000413374 KRBOX1C9JBD0 128 aa6.94□□□□□ -1.3
NCKIPSD-202ENST00000413374 TPT1P13693 172 aaKnown RBP6.94□□□□□ -1.3
NCKIPSD-202ENST00000413374 AKR1C3P42330 323 aa6.94□□□□□ -1.3
NCKIPSD-202ENST00000413374 CCL20P78556 96 aa6.94□□□□□ -1.3
NCKIPSD-202ENST00000413374 Q6ZSN1 163 aa6.94□□□□□ -1.3
NCKIPSD-202ENST00000413374 SPATA12Q7Z6I5 190 aa6.94□□□□□ -1.3
NCKIPSD-202ENST00000413374 FMC1Q96HJ9 113 aa6.94□□□□□ -1.3
NCKIPSD-202ENST00000413374 TXNDC17Q9BRA2 123 aa6.94□□□□□ -1.3
NCKIPSD-202ENST00000413374 hCG_2014768A0A024R1R8 64 aa6.93□□□□□ -1.3
NCKIPSD-202ENST00000413374 SCO2A0A1W2PP80 73 aa6.93□□□□□ -1.3
NCKIPSD-202ENST00000413374 H3BVH4 76 aa6.93□□□□□ -1.3
NCKIPSD-202ENST00000413374 ARMS2P0C7Q2 107 aa6.93□□□□□ -1.3
NCKIPSD-202ENST00000413374 MED14OSP0DP75 135 aa6.93□□□□□ -1.3
NCKIPSD-202ENST00000413374 FUSP35637 526 aaKnown RBP eCLIP6.93□□□□□ -1.3
NCKIPSD-202ENST00000413374 EIF5AP63241 154 aaKnown RBP6.93□□□□□ -1.3
NCKIPSD-202ENST00000413374 FAM162BQ5T6X4 162 aa6.93□□□□□ -1.3
NCKIPSD-202ENST00000413374 DMRTA1Q5VZB9 504 aa6.93□□□□□ -1.3
NCKIPSD-202ENST00000413374 PRADC1Q9BSG0 188 aa6.93□□□□□ -1.3
NCKIPSD-202ENST00000413374 SAMD10Q9BYL1 202 aa6.93□□□□□ -1.3
NCKIPSD-202ENST00000413374 LY96Q9Y6Y9 160 aa6.93□□□□□ -1.3
NCKIPSD-202ENST00000413374 GAGE12JA6NER3 117 aa6.92□□□□□ -1.3
NCKIPSD-202ENST00000413374 LTAP01374 205 aa6.92□□□□□ -1.3
NCKIPSD-202ENST00000413374 GAGE1Q13065 139 aa6.92□□□□□ -1.3
NCKIPSD-202ENST00000413374 GAGE4Q13068 117 aa6.92□□□□□ -1.3
NCKIPSD-202ENST00000413374 GAGE5Q13069 117 aa6.92□□□□□ -1.3
NCKIPSD-202ENST00000413374 GAGE13Q4V321 117 aa6.92□□□□□ -1.3
NCKIPSD-202ENST00000413374 PTH2Q96A98 100 aa6.92□□□□□ -1.3
NCKIPSD-202ENST00000413374 PARLQ9H300 379 aa6.92□□□□□ -1.3
NCKIPSD-202ENST00000413374 GNG13Q9P2W3 67 aa6.92□□□□□ -1.3
NCKIPSD-202ENST00000413374 Q9UF83 564 aa6.92□□□□□ -1.3
NCKIPSD-202ENST00000413374 MUC4Q99102 2169 aa6.91□□□□□ -1.3
NCKIPSD-202ENST00000413374 DNAH5Q8TE73 4624 aa6.91□□□□□ -1.3
NCKIPSD-202ENST00000413374 TRAV9-2A0A087WT02 112 aa6.91□□□□□ -1.3
NCKIPSD-202ENST00000413374 TRBV6-1A0A0K0K1D8 114 aa6.91□□□□□ -1.3
NCKIPSD-202ENST00000413374 TRBV6-4A0A1B0GX49 114 aa6.91□□□□□ -1.3
NCKIPSD-202ENST00000413374 M0R381 172 aa6.91□□□□□ -1.3
NCKIPSD-202ENST00000413374 EVI2AP22794 236 aa6.91□□□□□ -1.3
NCKIPSD-202ENST00000413374 KRTAP10-2P60368 255 aa6.91□□□□□ -1.3
NCKIPSD-202ENST00000413374 SSTP61278 116 aa6.91□□□□□ -1.3
NCKIPSD-202ENST00000413374 RPL19P84098 196 aaKnown RBP6.91□□□□□ -1.3
NCKIPSD-202ENST00000413374 RHOHQ15669 191 aa6.91□□□□□ -1.3
NCKIPSD-202ENST00000413374 ZNF674Q2M3X9 581 aa6.91□□□□□ -1.3
NCKIPSD-202ENST00000413374 OR10J3Q5JRS4 329 aa6.91□□□□□ -1.3
NCKIPSD-202ENST00000413374 PRR27Q6MZM9 219 aa6.91□□□□□ -1.3
NCKIPSD-202ENST00000413374 BAGE2Q86Y30 109 aa6.91□□□□□ -1.3
NCKIPSD-202ENST00000413374 IL36BQ9NZH7 164 aa6.91□□□□□ -1.3
NCKIPSD-202ENST00000413374 A0A087WWL8 130 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 MUC21A0A0G2JKD1 596 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 MUC21A0A140T8X8 626 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 A8MWV9 139 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 CIDEAO60543 219 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 IGHV3-30P01768 117 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 IGHV3-33P01772 117 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 CRYGDP07320 174 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 IGHV3-30-3P0DP02 117 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 IGHV3-30-5P0DP03 117 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 MGST1P10620 155 aaKnown RBP6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 FAM74A4Q5TZK3 123 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 Q6ZNX1 250 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 COX8CQ7Z4L0 72 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 SH2D6Q7Z4S9 175 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 C14orf178Q8N769 122 aaPredicted RBP6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 SYT8Q8NBV8 401 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 ATP6V0E2Q8NHE4 81 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 TCEAL7Q9BRU2 100 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 KRTAP17-1Q9BYP8 105 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 PHLDA3Q9Y5J5 127 aa6.9□□□□□ -1.3
NCKIPSD-202ENST00000413374 TRAV8-6A0A0B4J262 113 aa6.89□□□□□ -1.31
NCKIPSD-202ENST00000413374 S100A9P06702 114 aaKnown RBP6.89□□□□□ -1.31
NCKIPSD-202ENST00000413374 DNAH10OSP0CZ25 163 aa6.89□□□□□ -1.31
NCKIPSD-202ENST00000413374 LINC01559Q495D7 138 aa6.89□□□□□ -1.31
NCKIPSD-202ENST00000413374 Q6ZRN7 208 aaPredicted RBP6.89□□□□□ -1.31
NCKIPSD-202ENST00000413374 TCTE3Q8IZS6 198 aa6.89□□□□□ -1.31
NCKIPSD-202ENST00000413374 DERL1Q9BUN8 251 aa6.89□□□□□ -1.31
NCKIPSD-202ENST00000413374 MSRB1Q9NZV6 116 aa6.89□□□□□ -1.31
NCKIPSD-202ENST00000413374 IGHV3-38A0A0C4DH36 116 aa6.88□□□□□ -1.31
NCKIPSD-202ENST00000413374 BTF3P20290 206 aaKnown RBP6.88□□□□□ -1.31
NCKIPSD-202ENST00000413374 RPL35P42766 123 aaKnown RBP6.88□□□□□ -1.31
NCKIPSD-202ENST00000413374 DNLZQ5SXM8 178 aa6.88□□□□□ -1.31
NCKIPSD-202ENST00000413374 EIF5AL1Q6IS14 154 aaKnown RBP6.88□□□□□ -1.31
NCKIPSD-202ENST00000413374 UFSP1Q6NVU6 142 aa6.88□□□□□ -1.31
NCKIPSD-202ENST00000413374 ZFP2Q6ZN57 461 aa6.88□□□□□ -1.31
NCKIPSD-202ENST00000413374 SFRP2Q96HF1 295 aa6.88□□□□□ -1.31
NCKIPSD-202ENST00000413374 GTSF1LQ9H1H1 148 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms