RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 ORMDL2Q53FV1 153 aa8.68□□□□□ -1.02
PTPRF-204ENST00000412568 PHLDA1Q8WV24 401 aaPredicted RBP8.68□□□□□ -1.02
PTPRF-204ENST00000412568 MSRB1Q9NZV6 116 aa8.68□□□□□ -1.02
PTPRF-204ENST00000412568 TOMM7Q9P0U1 55 aa8.68□□□□□ -1.02
PTPRF-204ENST00000412568 IGHV1-24A0A0C4DH33 117 aa8.68□□□□□ -1.02
PTPRF-204ENST00000412568 IGHV7-4-1A0A0J9YVY3 117 aa8.68□□□□□ -1.02
PTPRF-204ENST00000412568 K7EP13 123 aa8.68□□□□□ -1.02
PTPRF-204ENST00000412568 BUB3O43684 328 aa8.68□□□□□ -1.02
PTPRF-204ENST00000412568 CFHR3Q02985 330 aa8.68□□□□□ -1.02
PTPRF-204ENST00000412568 C11orf71Q6IPW1 123 aa8.68□□□□□ -1.02
PTPRF-204ENST00000412568 WIPF2Q8TF74 440 aaPredicted RBP8.68□□□□□ -1.02
PTPRF-204ENST00000412568 PGPEP1Q9NXJ5 209 aa8.68□□□□□ -1.02
PTPRF-204ENST00000412568 J3QLI3 93 aa8.67□□□□□ -1.02
PTPRF-204ENST00000412568 CCL25O15444 150 aa8.67□□□□□ -1.02
PTPRF-204ENST00000412568 GNRH2O43555 120 aa8.67□□□□□ -1.02
PTPRF-204ENST00000412568 LAGE3Q14657 143 aa8.67□□□□□ -1.02
PTPRF-204ENST00000412568 MRPL51Q4U2R6 128 aaKnown RBP8.67□□□□□ -1.02
PTPRF-204ENST00000412568 CFHR4Q92496 578 aa8.67□□□□□ -1.02
PTPRF-204ENST00000412568 BOD1L1Q8NFC6 3051 aa8.67□□□□□ -1.02
PTPRF-204ENST00000412568 LINC01619G3V211 115 aa8.67□□□□□ -1.02
PTPRF-204ENST00000412568 TNFRSF6BO95407 300 aa8.67□□□□□ -1.02
PTPRF-204ENST00000412568 YPEL4Q96NS1 127 aa8.67□□□□□ -1.02
PTPRF-204ENST00000412568 SMPXQ9UHP9 88 aa8.67□□□□□ -1.02
PTPRF-204ENST00000412568 ADAMTS20P59510 1910 aa8.67□□□□□ -1.02
PTPRF-204ENST00000412568 TRGV4A0A0C4DH28 118 aa8.67□□□□□ -1.02
PTPRF-204ENST00000412568 CRYGCP07315 174 aa8.67□□□□□ -1.02
PTPRF-204ENST00000412568 CSTL1Q9H114 145 aa8.67□□□□□ -1.02
PTPRF-204ENST00000412568 MYO15AQ9UKN7 3530 aa8.67□□□□□ -1.02
PTPRF-204ENST00000412568 WFDC11Q8NEX6 87 aa8.66□□□□□ -1.02
PTPRF-204ENST00000412568 RNASE8Q8TDE3 154 aaKnown RBP8.66□□□□□ -1.02
PTPRF-204ENST00000412568 DPH3P1Q9H4G8 78 aa8.66□□□□□ -1.02
PTPRF-204ENST00000412568 DEFB130BP0DP73 79 aa8.66□□□□□ -1.02
PTPRF-204ENST00000412568 DEFB130AP0DP74 79 aa8.66□□□□□ -1.02
PTPRF-204ENST00000412568 GATA1P15976 413 aaPredicted RBP8.66□□□□□ -1.02
PTPRF-204ENST00000412568 ZNF843Q8N446 348 aa8.66□□□□□ -1.02
PTPRF-204ENST00000412568 ERG28Q9UKR5 140 aa8.66□□□□□ -1.02
PTPRF-204ENST00000412568 TSSC4Q9Y5U2 329 aaPredicted RBP8.66□□□□□ -1.02
PTPRF-204ENST00000412568 SPTBN5Q9NRC6 3674 aaKnown RBP8.66□□□□□ -1.02
PTPRF-204ENST00000412568 TRGV11A0A075B6L2 103 aa8.65□□□□□ -1.02
PTPRF-204ENST00000412568 GTSF1Q8WW33 167 aa8.65□□□□□ -1.02
PTPRF-204ENST00000412568 ODF3BA8MYP8 253 aa8.65□□□□□ -1.02
PTPRF-204ENST00000412568 SPINK8P0C7L1 97 aa8.65□□□□□ -1.02
PTPRF-204ENST00000412568 BVES-AS1Q5T3Y7 98 aa8.65□□□□□ -1.02
PTPRF-204ENST00000412568 C10orf99Q6UWK7 81 aa8.65□□□□□ -1.02
PTPRF-204ENST00000412568 APRG1Q8IVJ8 170 aa8.65□□□□□ -1.02
PTPRF-204ENST00000412568 DLX4Q92988 240 aaPredicted RBP8.65□□□□□ -1.02
PTPRF-204ENST00000412568 SIGLEC8Q9NYZ4 499 aa8.65□□□□□ -1.02
PTPRF-204ENST00000412568 NPYP01303 97 aa8.65□□□□□ -1.03
PTPRF-204ENST00000412568 ZFAND6Q6FIF0 208 aa8.65□□□□□ -1.03
PTPRF-204ENST00000412568 AKAP13Q12802 2813 aa8.64□□□□□ -1.03
PTPRF-204ENST00000412568 C9orf118A6NHY6 69 aa8.64□□□□□ -1.03
PTPRF-204ENST00000412568 NPC2P61916 151 aa8.64□□□□□ -1.03
PTPRF-204ENST00000412568 H3BRM9 83 aa8.64□□□□□ -1.03
PTPRF-204ENST00000412568 IGLV2-8P01709 118 aa8.64□□□□□ -1.03
PTPRF-204ENST00000412568 ELANEP08246 267 aa8.64□□□□□ -1.03
PTPRF-204ENST00000412568 COX8AP10176 69 aa8.64□□□□□ -1.03
PTPRF-204ENST00000412568 PLNP26678 52 aa8.64□□□□□ -1.03
PTPRF-204ENST00000412568 LINC00322Q6ZN03 302 aaPredicted RBP8.64□□□□□ -1.03
PTPRF-204ENST00000412568 LINC00173Q6ZV60 143 aa8.64□□□□□ -1.03
PTPRF-204ENST00000412568 KLF12Q9Y4X4 402 aa8.64□□□□□ -1.03
PTPRF-204ENST00000412568 AMTNQ6UX39 209 aa8.63□□□□□ -1.03
PTPRF-204ENST00000412568 PCSK5Q92824 1860 aa8.63□□□□□ -1.03
PTPRF-204ENST00000412568 C1orf159Q96HA4 380 aa8.63□□□□□ -1.03
PTPRF-204ENST00000412568 IGHV4OR15-8A0A075B7B6 117 aa8.63□□□□□ -1.03
PTPRF-204ENST00000412568 A0A087WW49 117 aa8.63□□□□□ -1.03
PTPRF-204ENST00000412568 CD28P10747 220 aa8.63□□□□□ -1.03
PTPRF-204ENST00000412568 CDKN1BP46527 198 aa8.62□□□□□ -1.03
PTPRF-204ENST00000412568 CCDC140Q96MF4 163 aa8.62□□□□□ -1.03
PTPRF-204ENST00000412568 TRAV8-4A0A0B4J246 113 aa8.62□□□□□ -1.03
PTPRF-204ENST00000412568 TRBV7-9A0A0J9YWB2 115 aa8.62□□□□□ -1.03
PTPRF-204ENST00000412568 KRTAP10-9P60411 292 aa8.62□□□□□ -1.03
PTPRF-204ENST00000412568 LY6LH3BQJ8 138 aa8.62□□□□□ -1.03
PTPRF-204ENST00000412568 IGHG2P01859 326 aa8.62□□□□□ -1.03
PTPRF-204ENST00000412568 Q6ZS46 218 aa8.62□□□□□ -1.03
PTPRF-204ENST00000412568 IGHV3-38A0A0C4DH36 116 aa8.62□□□□□ -1.03
PTPRF-204ENST00000412568 WI2-2373I1.2A0A1W2PRP0 233 aa8.62□□□□□ -1.03
PTPRF-204ENST00000412568 CHCHD5Q9BSY4 110 aa8.62□□□□□ -1.03
PTPRF-204ENST00000412568 C9JAW5 83 aa8.61□□□□□ -1.03
PTPRF-204ENST00000412568 K7ERJ3 54 aa8.61□□□□□ -1.03
PTPRF-204ENST00000412568 SRSF2Q01130 221 aaKnown RBP8.61□□□□□ -1.03
PTPRF-204ENST00000412568 COPS9Q8WXC6 57 aa8.61□□□□□ -1.03
PTPRF-204ENST00000412568 H3BMG7 143 aa8.61□□□□□ -1.03
PTPRF-204ENST00000412568 INSP01308 110 aa8.61□□□□□ -1.03
PTPRF-204ENST00000412568 ZNF415Q09FC8 603 aa8.61□□□□□ -1.03
PTPRF-204ENST00000412568 RNF114Q9Y508 228 aa8.61□□□□□ -1.03
PTPRF-204ENST00000412568 CRYGBP07316 175 aa8.6□□□□□ -1.03
PTPRF-204ENST00000412568 LGALS1P09382 135 aaKnown RBP8.6□□□□□ -1.03
PTPRF-204ENST00000412568 KLF5Q13887 457 aaPredicted RBP8.6□□□□□ -1.03
PTPRF-204ENST00000412568 LINC01559Q495D7 138 aa8.6□□□□□ -1.03
PTPRF-204ENST00000412568 IGHV1OR15-1A0A075B7D0 117 aa8.6□□□□□ -1.03
PTPRF-204ENST00000412568 K7EP34 96 aa8.6□□□□□ -1.03
PTPRF-204ENST00000412568 CCL24O00175 119 aa8.6□□□□□ -1.03
PTPRF-204ENST00000412568 AVPP01185 164 aa8.6□□□□□ -1.03
PTPRF-204ENST00000412568 LINC01549A6NIU2 74 aa8.59□□□□□ -1.03
PTPRF-204ENST00000412568 TMEM101Q96IK0 257 aa8.59□□□□□ -1.03
PTPRF-204ENST00000412568 FRYQ5TBA9 3013 aa8.59□□□□□ -1.03
PTPRF-204ENST00000412568 A6NDX4 124 aa8.59□□□□□ -1.03
PTPRF-204ENST00000412568 C3orf56Q8N813 242 aa8.59□□□□□ -1.03
PTPRF-204ENST00000412568 VCYO14598 125 aa8.59□□□□□ -1.03
PTPRF-204ENST00000412568 GDF5OSQ5U4N7 250 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 1016.9 ms