RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 SCGB1D4Q6XE38 83 aa3.91□□□□□ -1.78
HERC4-205ENST00000412272 C20orf197Q8N268 126 aa3.91□□□□□ -1.78
HERC4-205ENST00000412272 SLC25A29Q8N8R3 303 aa3.91□□□□□ -1.78
HERC4-205ENST00000412272 FANCD2OSQ96PS1 177 aa3.91□□□□□ -1.78
HERC4-205ENST00000412272 TRAV3A0A0B4J244 114 aa3.91□□□□□ -1.78
HERC4-205ENST00000412272 M0R378 163 aa3.91□□□□□ -1.78
HERC4-205ENST00000412272 COX7A2P2O60397 106 aa3.91□□□□□ -1.78
HERC4-205ENST00000412272 FAM53AQ6NSI3 398 aaPredicted RBP3.91□□□□□ -1.78
HERC4-205ENST00000412272 NUP37Q8NFH4 326 aa3.91□□□□□ -1.78
HERC4-205ENST00000412272 LST1O00453 97 aa3.9□□□□□ -1.78
HERC4-205ENST00000412272 VPREB1P12018 145 aa3.9□□□□□ -1.78
HERC4-205ENST00000412272 CD40P25942 277 aa3.9□□□□□ -1.78
HERC4-205ENST00000412272 MPLKIPQ8TAP9 179 aa3.9□□□□□ -1.78
HERC4-205ENST00000412272 UBE2D4Q9Y2X8 147 aa3.9□□□□□ -1.78
HERC4-205ENST00000412272 VCANP13611 3396 aa3.9□□□□□ -1.78
HERC4-205ENST00000412272 Q6JHZ5 121 aa3.9□□□□□ -1.78
HERC4-205ENST00000412272 C17orf82Q86X59 251 aaPredicted RBP3.9□□□□□ -1.78
HERC4-205ENST00000412272 DAND5Q8N907 189 aa3.9□□□□□ -1.78
HERC4-205ENST00000412272 VEGFBP49765 207 aa3.9□□□□□ -1.79
HERC4-205ENST00000412272 KLKP1Q107X0 134 aa3.9□□□□□ -1.79
HERC4-205ENST00000412272 SMKR1H3BMG3 65 aa3.9□□□□□ -1.79
HERC4-205ENST00000412272 H7C2G1 150 aa3.9□□□□□ -1.79
HERC4-205ENST00000412272 CRIP1P50238 77 aa3.9□□□□□ -1.79
HERC4-205ENST00000412272 TMEM30BQ3MIR4 351 aa3.9□□□□□ -1.79
HERC4-205ENST00000412272 C14orf178Q8N769 122 aaPredicted RBP3.9□□□□□ -1.79
HERC4-205ENST00000412272 IGKV3D-15A0A087WSY6 115 aa3.89□□□□□ -1.79
HERC4-205ENST00000412272 DAD1P61803 113 aa3.89□□□□□ -1.79
HERC4-205ENST00000412272 SERTAD4-AS1Q5TG53 156 aa3.89□□□□□ -1.79
HERC4-205ENST00000412272 DYNAPQ8N1N2 210 aa3.89□□□□□ -1.79
HERC4-205ENST00000412272 ZNF491Q8N8L2 437 aa3.89□□□□□ -1.79
HERC4-205ENST00000412272 KLHL30-AS1Q8NEE0 82 aa3.89□□□□□ -1.79
HERC4-205ENST00000412272 LINC00588Q9Y4M8 146 aa3.89□□□□□ -1.79
HERC4-205ENST00000412272 KNTC1P50748 2209 aa3.89□□□□□ -1.79
HERC4-205ENST00000412272 MKI67P46013 3256 aaKnown RBP3.89□□□□□ -1.79
HERC4-205ENST00000412272 RBMY1BA6NDE4 496 aaKnown RBP3.89□□□□□ -1.79
HERC4-205ENST00000412272 RBMY1EA6NEQ0 496 aaKnown RBP3.89□□□□□ -1.79
HERC4-205ENST00000412272 RBMY1DP0C7P1 496 aaKnown RBP3.89□□□□□ -1.79
HERC4-205ENST00000412272 RBMY1A1P0DJD3 496 aaKnown RBP3.89□□□□□ -1.79
HERC4-205ENST00000412272 RBMY1CP0DJD4 496 aa3.89□□□□□ -1.79
HERC4-205ENST00000412272 INAFM2P0DMQ5 153 aa3.89□□□□□ -1.79
HERC4-205ENST00000412272 SUB1P53999 127 aaKnown RBP eCLIP3.89□□□□□ -1.795e-7■■■■■ 33
HERC4-205ENST00000412272 RBMY1FQ15415 496 aaKnown RBP3.89□□□□□ -1.79
HERC4-205ENST00000412272 NDUFA4L2Q9NRX3 87 aa3.89□□□□□ -1.79
HERC4-205ENST00000412272 C22orf24Q9Y442 160 aa3.89□□□□□ -1.79
HERC4-205ENST00000412272 INTS1Q8N201 2190 aaKnown RBP3.89□□□□□ -1.79
HERC4-205ENST00000412272 MNX1P50219 401 aaPredicted RBP3.89□□□□□ -1.79
HERC4-205ENST00000412272 SOSTDC1Q6X4U4 206 aa3.89□□□□□ -1.79
HERC4-205ENST00000412272 ZNF575Q86XF7 245 aa3.89□□□□□ -1.79
HERC4-205ENST00000412272 AMELXQ99217 191 aa3.89□□□□□ -1.79
HERC4-205ENST00000412272 XIRP2A4UGR9 3374 aa3.89□□□□□ -1.79
HERC4-205ENST00000412272 UNC13CQ8NB66 2214 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 IGKV1D-17A0A075B6S4 117 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 PSPNO60542 156 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 CKS2P33552 79 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 B3GALT5-AS1P59052 145 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 LINC00574Q9H8X3 128 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 LAMA3Q16787 3333 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 A0A0J9YX75 114 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 GHRHP01286 108 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 LYZL1Q6UWQ5 148 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 CLEC2BQ92478 149 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 TOMM6Q96B49 74 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 GAS8-AS1O95177 125 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 CGB3P0DN86 165 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 CGB7P0DN87 165 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 LGALS3P17931 250 aaKnown RBP3.88□□□□□ -1.79
HERC4-205ENST00000412272 LAGE3Q14657 143 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 PAPPA-AS1Q5QFB9 102 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 PATE1Q8WXA2 126 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 ICOSQ9Y6W8 199 aa3.88□□□□□ -1.79
HERC4-205ENST00000412272 DIDO1Q9BTC0 2240 aaKnown RBP3.88□□□□□ -1.79
HERC4-205ENST00000412272 IGKV3D-7A0A0C4DH55 119 aa3.87□□□□□ -1.79
HERC4-205ENST00000412272 S100A7L2Q5SY68 101 aa3.87□□□□□ -1.79
HERC4-205ENST00000412272 IGHV4-4A0A075B6R2 117 aa3.87□□□□□ -1.79
HERC4-205ENST00000412272 GGNQ86UU5 652 aa3.87□□□□□ -1.79
HERC4-205ENST00000412272 IGHV5-51A0A0C4DH38 117 aa3.87□□□□□ -1.79
HERC4-205ENST00000412272 ATP5EP56381 51 aaPredicted RBP3.87□□□□□ -1.79
HERC4-205ENST00000412272 ADAMTSL4-AS1Q5T5F5 129 aa3.87□□□□□ -1.79
HERC4-205ENST00000412272 PRR25Q96S07 402 aa3.87□□□□□ -1.79
HERC4-205ENST00000412272 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.87□□□□□ -1.79
HERC4-205ENST00000412272 Q1RN00 199 aa3.87□□□□□ -1.79
HERC4-205ENST00000412272 MED12Q93074 2177 aa3.87□□□□□ -1.79
HERC4-205ENST00000412272 UNC80Q8N2C7 3258 aa3.87□□□□□ -1.79
HERC4-205ENST00000412272 TRAV13-2A0A0B4J235 113 aa3.86□□□□□ -1.79
HERC4-205ENST00000412272 TRBV27A0A0K0K1C4 114 aa3.86□□□□□ -1.79
HERC4-205ENST00000412272 F8WEM9 126 aa3.86□□□□□ -1.79
HERC4-205ENST00000412272 SH2D1AO60880 128 aa3.86□□□□□ -1.79
HERC4-205ENST00000412272 TSPEAR-AS2P59090 65 aa3.86□□□□□ -1.79
HERC4-205ENST00000412272 PDE6HQ13956 83 aa3.86□□□□□ -1.79
HERC4-205ENST00000412272 Q6ZS52 159 aa3.86□□□□□ -1.79
HERC4-205ENST00000412272 VSIG2Q96IQ7 327 aa3.86□□□□□ -1.79
HERC4-205ENST00000412272 ARHGAP32A7KAX9 2087 aa3.86□□□□□ -1.79
HERC4-205ENST00000412272 RPL28P46779 137 aaKnown RBP3.86□□□□□ -1.79
HERC4-205ENST00000412272 LINC00205P59089 165 aa3.86□□□□□ -1.79
HERC4-205ENST00000412272 FAM216BQ8N7L0 139 aa3.86□□□□□ -1.79
HERC4-205ENST00000412272 KLF14Q8TD94 323 aaPredicted RBP3.86□□□□□ -1.79
HERC4-205ENST00000412272 DNAH14Q0VDD8 3507 aa3.86□□□□□ -1.79
HERC4-205ENST00000412272 ZNF73O43830 326 aaPredicted RBP3.86□□□□□ -1.79
HERC4-205ENST00000412272 SPTY2D1-AS1A0A0U1RR47 76 aa3.85□□□□□ -1.79
HERC4-205ENST00000412272 ADARB2-AS1A8MUL3 147 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms