RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 PARLQ9H300 379 aa1.49□□□□□ -2.17
RNU4-53P-201ENST00000410828 TREM1Q9NP99 234 aa1.49□□□□□ -2.17
RNU4-53P-201ENST00000410828 LYRM2Q9NU23 88 aaPredicted RBP1.49□□□□□ -2.17
RNU4-53P-201ENST00000410828 AP5S1Q9NUS5 200 aa1.49□□□□□ -2.17
RNU4-53P-201ENST00000410828 PLAC8Q9NZF1 115 aa1.49□□□□□ -2.17
RNU4-53P-201ENST00000410828 GSKIPQ9P0R6 139 aa1.49□□□□□ -2.17
RNU4-53P-201ENST00000410828 RSL24D1Q9UHA3 163 aaKnown RBP1.49□□□□□ -2.17
RNU4-53P-201ENST00000410828 VAX2Q9UIW0 290 aa1.49□□□□□ -2.17
RNU4-53P-201ENST00000410828 LPAP08519 4548 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 TRBV6-8A0A0A6YYG3 113 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 TRBV10-1A0A0K0K1A3 114 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 UBE2L5PA0A1B0GUS4 154 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 hDV102S1A0JD36 115 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 C9orf170A2RU37 121 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 FAM24AA6NFZ4 105 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 F6UZH7 168 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 H7C1H1 209 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 RHODO00212 210 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 OR7C2O60412 319 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 TCRBP04435 133 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 PVALBP20472 110 aaPredicted RBP1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 FGF7P21781 194 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 S100A4P26447 101 aaKnown RBP1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 SULT1A1P50225 295 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 S100A10P60903 97 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 PKIAP61925 76 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 UBE2L3P68036 154 aaKnown RBP1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 HBG1P69891 147 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 HBG2P69892 147 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 PRR3P79522 188 aaKnown RBP1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 RPL36AP83881 106 aaKnown RBP1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 CTF1Q16619 201 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 ATP6V1FQ16864 119 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 LGALSLQ3ZCW2 172 aaPredicted RBP1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 GCSAMLQ5JQS6 135 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 ZNF664Q8N3J9 261 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 TOMM5Q8N4H5 51 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 ARL6IP6Q8N6S5 226 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 TMEM75Q8N9X5 138 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 OR10G7Q8NGN6 311 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 RPL36ALQ969Q0 106 aaKnown RBP1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 FXYD5Q96DB9 178 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 PHYHIPLQ96FC7 376 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 HYLS1Q96M11 299 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 C9orf85Q96MD7 179 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 NDFIP1Q9BT67 221 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 SLIRPQ9GZT3 109 aaKnown RBP1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 PRR34Q9NV39 138 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 OR5AC2Q9NZP5 309 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 Q9UF83 564 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 PSORS1C2Q9UIG4 136 aa1.48□□□□□ -2.17
RNU4-53P-201ENST00000410828 IGLV10-54A0A075B6I4 117 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 TRBV7-3A0A075B6L6 115 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 A0A087WWL8 130 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 TRAV8-4A0A0B4J246 113 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 TRAV26-2A0A0B4J265 109 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 SERTM2A0A1B0GWG4 89 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 C17orf112F2Z3M2 114 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 K7EQM0 130 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 CCSO14618 274 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 NDUFS6O75380 124 aaKnown RBP1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 ATP6V1G2O95670 118 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 PTTG1O95997 202 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 GCGP01275 180 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 IFNA7P01567 189 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 P01737 135 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 MBPP02686 304 aaPredicted RBP1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 SLPIP03973 132 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 GZMBP10144 247 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 RNASE3P12724 160 aaKnown RBP1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 RPS10P46783 165 aaKnown RBP1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 TAS2R45P59539 299 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 UBE2D3P61077 147 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 UBE2D2P62837 147 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 COX6A2Q02221 97 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 SRSF9Q13242 221 aaKnown RBP eCLIP1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 PRR4Q16378 134 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 MAJINQ3KP22 176 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 ZFP69Q49AA0 526 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 SMUG1Q53HV7 270 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 MPV17L2Q567V2 206 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 FAM74A4Q5TZK3 123 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 UFSP1Q6NVU6 142 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 CFAP161Q6P656 301 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 KRTAP26-1Q6PEX3 210 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 Q6ZRP5 223 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 GOLT1AQ6ZVE7 132 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 STX12Q86Y82 276 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 LINC00269Q8N2A0 174 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 TMEM252Q8N6L7 170 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 C14orf178Q8N769 122 aaPredicted RBP1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 STPG4Q8N801 248 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 PRSS3P2Q8NHM4 247 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 LYPD6BQ8NI32 183 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 THAP6Q8TBB0 222 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 MITD1Q8WV92 249 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 TRIM63Q969Q1 353 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 TVP23CQ96ET8 276 aa1.47□□□□□ -2.17
RNU4-53P-201ENST00000410828 BCL7BQ9BQE9 202 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms