RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 ARFGEF3Q5TH69 2177 aa2.37□□□□□ -2.03
CUL3-204ENST00000409777 TRBV6-5A0A0K0K1A5 114 aa2.37□□□□□ -2.03
CUL3-204ENST00000409777 C11orf86A6NJI1 115 aa2.37□□□□□ -2.03
CUL3-204ENST00000409777 RPL13AP40429 203 aaKnown RBP2.37□□□□□ -2.03
CUL3-204ENST00000409777 POLR2KP53803 58 aaKnown RBP2.37□□□□□ -2.03
CUL3-204ENST00000409777 XGP55808 180 aa2.37□□□□□ -2.03
CUL3-204ENST00000409777 CKS1BP61024 79 aa2.37□□□□□ -2.03
CUL3-204ENST00000409777 SUMO2P61956 95 aaKnown RBP2.37□□□□□ -2.03
CUL3-204ENST00000409777 DEFB109BQ30KR1 87 aa2.37□□□□□ -2.03
CUL3-204ENST00000409777 DEFB121Q5J5C9 76 aa2.37□□□□□ -2.03
CUL3-204ENST00000409777 RNF183Q96D59 192 aa2.37□□□□□ -2.03
CUL3-204ENST00000409777 TIMM17AQ99595 171 aa2.37□□□□□ -2.03
CUL3-204ENST00000409777 TPPP3Q9BW30 176 aa2.37□□□□□ -2.03
CUL3-204ENST00000409777 SIRPDQ9H106 197 aa2.37□□□□□ -2.03
CUL3-204ENST00000409777 ONECUT1Q9UBC0 465 aa2.37□□□□□ -2.03
CUL3-204ENST00000409777 CYSLTR1Q9Y271 337 aa2.37□□□□□ -2.03
CUL3-204ENST00000409777 APOMO95445 188 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 PPP1R17O96001 155 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 ORM1P02763 201 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 NHLRC4P0CG21 123 aaPredicted RBP2.36□□□□□ -2.03
CUL3-204ENST00000409777 EFNA4P52798 201 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 DLX1P56177 255 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 PAPPA-AS1Q5QFB9 102 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 PLEKHB2Q96CS7 222 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 TMEM141Q96I45 108 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 HIST1H4GQ99525 98 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 PRADC1Q9BSG0 188 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 COL6A3P12111 3177 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 VPS13AQ96RL7 3174 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 CELSR3Q9NYQ7 3312 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 TTC28Q96AY4 2481 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 PLXNB1O43157 2135 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 ZGRF1Q86YA3 2104 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 TRBV7-1A0A0A6YYK4 115 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 A0A0B4J2C4 111 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 CNIH1O95406 144 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 IGHV1-69P01742 117 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 PLA2G1BP04054 148 aaKnown RBP2.36□□□□□ -2.03
CUL3-204ENST00000409777 ATP5G2Q06055 141 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 ZNF876PQ49A33 203 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 LYRM7Q5U5X0 104 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 AMTNQ6UX39 209 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 TMEM263Q8WUH6 116 aaKnown RBP2.36□□□□□ -2.03
CUL3-204ENST00000409777 C20orf173Q96LM9 149 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 DPH3P1Q9H4G8 78 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 ZFHX2Q9C0A1 2572 aaPredicted RBP2.36□□□□□ -2.03
CUL3-204ENST00000409777 NBEAQ8NFP9 2946 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 ZZEF1O43149 2961 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 BSNQ9UPA5 3926 aa2.36□□□□□ -2.03
CUL3-204ENST00000409777 TRAV26-1A0A087WT03 109 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 LGALS9O00182 355 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 VCYO14598 125 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 TCL1BO95988 128 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 MT-ATP8P03928 68 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 CFC1BP0CG36 223 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 CFC1P0CG37 223 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 RNASE3P12724 160 aaKnown RBP2.35□□□□□ -2.03
CUL3-204ENST00000409777 ASIPP42127 132 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 TSPEAR-AS2P59090 65 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 SCGB2A2Q13296 93 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 MRPL23Q16540 153 aaKnown RBP2.35□□□□□ -2.03
CUL3-204ENST00000409777 C9orf139Q6ZV77 190 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 VMO1Q7Z5L0 202 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 C10orf126Q8N4M7 172 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 RNF182Q8N6D2 247 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 SYT8Q8NBV8 401 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 LINC00477Q96M19 166 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 GEMIN7Q9H840 131 aaKnown RBP2.35□□□□□ -2.03
CUL3-204ENST00000409777 YAE1D1Q9NRH1 226 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 ZNF580Q9UK33 172 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 TIMM8BQ9Y5J9 83 aaPredicted RBP2.35□□□□□ -2.03
CUL3-204ENST00000409777 CNTRLQ7Z7A1 2325 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 CHD8Q9HCK8 2581 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 ZFHX4Q86UP3 3567 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 TRAV26-2A0A0B4J265 109 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 TRBV27A0A0K0K1C4 114 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 KLLNB2CW77 178 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 RHODO00212 210 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 ZNF688P0C7X2 276 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 COX7A1P24310 79 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 TCTAP57738 103 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 NSUN5P1Q3KNT7 163 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 IGFL4Q6B9Z1 124 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 C2orf66Q6UXQ4 117 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 ZFP2Q6ZN57 461 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 Q6ZQT7 251 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 FAM104AQ969W3 186 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 ODF3Q96PU9 254 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 SCGB3A1Q96QR1 104 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 LITAFQ99732 161 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 ZNF256Q9Y2P7 627 aaPredicted RBP2.35□□□□□ -2.03
CUL3-204ENST00000409777 AGRNO00468 2067 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 FAM208BQ5VWN6 2430 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 TMEM223A0PJW6 202 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 SDHAF1A6NFY7 115 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 FAM223BA6NKX1 122 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 LINC01548A6NM66 108 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 OVOL1O14753 267 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 SPINK8P0C7L1 97 aa2.35□□□□□ -2.03
CUL3-204ENST00000409777 RNASE4P34096 147 aaKnown RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms