RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 PCLOQ9Y6V0 5065 aa13.35□□□□□ -0.27
TSPAN4-209ENST00000409543 UMAD1C9J7I0 102 aa13.34□□□□□ -0.27
TSPAN4-209ENST00000409543 S100A4P26447 101 aaKnown RBP13.34□□□□□ -0.27
TSPAN4-209ENST00000409543 PIK3CD-AS1Q5SR53 167 aa13.34□□□□□ -0.27
TSPAN4-209ENST00000409543 CST9LP1Q5W188 147 aa13.34□□□□□ -0.27
TSPAN4-209ENST00000409543 SPATA12Q7Z6I5 190 aa13.34□□□□□ -0.27
TSPAN4-209ENST00000409543 NHLRC2Q8NBF2 726 aa13.34□□□□□ -0.27
TSPAN4-209ENST00000409543 MBD3L1Q8WWY6 194 aa13.34□□□□□ -0.27
TSPAN4-209ENST00000409543 FMC1Q96HJ9 113 aa13.34□□□□□ -0.27
TSPAN4-209ENST00000409543 PRADC1Q9BSG0 188 aa13.34□□□□□ -0.27
TSPAN4-209ENST00000409543 KRTAP17-1Q9BYP8 105 aa13.34□□□□□ -0.27
TSPAN4-209ENST00000409543 RYR1P21817 5038 aa13.33□□□□□ -0.28
TSPAN4-209ENST00000409543 TRBV6-1A0A0K0K1D8 114 aa13.33□□□□□ -0.28
TSPAN4-209ENST00000409543 BCL2L11O43521 198 aa13.33□□□□□ -0.28
TSPAN4-209ENST00000409543 DNAH10OSP0CZ25 163 aa13.33□□□□□ -0.28
TSPAN4-209ENST00000409543 ASIPP42127 132 aa13.33□□□□□ -0.28
TSPAN4-209ENST00000409543 CRIP1P50238 77 aa13.33□□□□□ -0.28
TSPAN4-209ENST00000409543 UBE2G1P62253 170 aa13.33□□□□□ -0.28
TSPAN4-209ENST00000409543 RHOHQ15669 191 aa13.33□□□□□ -0.28
TSPAN4-209ENST00000409543 ZC2HC1AQ96GY0 325 aa13.33□□□□□ -0.28
TSPAN4-209ENST00000409543 ZNF471Q9BX82 626 aaPredicted RBP13.33□□□□□ -0.28
TSPAN4-209ENST00000409543 IGHV3-73A0A0B4J1V6 119 aa13.32□□□□□ -0.28
TSPAN4-209ENST00000409543 KANTRA0A1W2PQU2 76 aa13.32□□□□□ -0.28
TSPAN4-209ENST00000409543 B4DEV8 164 aa13.32□□□□□ -0.28
TSPAN4-209ENST00000409543 EVI2AP22794 236 aa13.32□□□□□ -0.28
TSPAN4-209ENST00000409543 NFE4Q86UQ8 179 aa13.32□□□□□ -0.28
TSPAN4-209ENST00000409543 SFT2D1Q8WV19 159 aa13.32□□□□□ -0.28
TSPAN4-209ENST00000409543 IL36BQ9NZH7 164 aa13.32□□□□□ -0.28
TSPAN4-209ENST00000409543 A8MWV9 139 aa13.31□□□□□ -0.28
TSPAN4-209ENST00000409543 PAGE4O60829 102 aa13.31□□□□□ -0.28
TSPAN4-209ENST00000409543 MGST1P10620 155 aaKnown RBP13.31□□□□□ -0.28
TSPAN4-209ENST00000409543 EIF5AP63241 154 aaKnown RBP13.31□□□□□ -0.28
TSPAN4-209ENST00000409543 DNLZQ5SXM8 178 aa13.31□□□□□ -0.28
TSPAN4-209ENST00000409543 FAM213BQ8TBF2 198 aa13.31□□□□□ -0.28
TSPAN4-209ENST00000409543 TNFRSF18Q9Y5U5 241 aa13.31□□□□□ -0.28
TSPAN4-209ENST00000409543 KRBOX1C9JBD0 128 aa13.3□□□□□ -0.28
TSPAN4-209ENST00000409543 SH2D1AO60880 128 aa13.3□□□□□ -0.28
TSPAN4-209ENST00000409543 LTAP01374 205 aa13.3□□□□□ -0.28
TSPAN4-209ENST00000409543 KRTAP10-2P60368 255 aa13.3□□□□□ -0.28
TSPAN4-209ENST00000409543 FAM162BQ5T6X4 162 aa13.3□□□□□ -0.28
TSPAN4-209ENST00000409543 ZFP2Q6ZN57 461 aa13.3□□□□□ -0.28
TSPAN4-209ENST00000409543 PARLQ9H300 379 aa13.3□□□□□ -0.28
TSPAN4-209ENST00000409543 LRP1BQ9NZR2 4599 aa13.29□□□□□ -0.28
TSPAN4-209ENST00000409543 CDK2AP2O75956 126 aa13.29□□□□□ -0.28
TSPAN4-209ENST00000409543 AKR1C3P42330 323 aa13.29□□□□□ -0.28
TSPAN4-209ENST00000409543 ZNF674Q2M3X9 581 aa13.29□□□□□ -0.28
TSPAN4-209ENST00000409543 LGALSLQ3ZCW2 172 aaPredicted RBP13.29□□□□□ -0.28
TSPAN4-209ENST00000409543 MSRB1Q9NZV6 116 aa13.29□□□□□ -0.28
TSPAN4-209ENST00000409543 M0R036 132 aa13.28□□□□□ -0.28
TSPAN4-209ENST00000409543 TMUB2Q71RG4 321 aa13.28□□□□□ -0.28
TSPAN4-209ENST00000409543 C10orf126Q8N4M7 172 aa13.28□□□□□ -0.28
TSPAN4-209ENST00000409543 BOLA1Q9Y3E2 137 aa13.28□□□□□ -0.28
TSPAN4-209ENST00000409543 IGHV3-38A0A0C4DH36 116 aa13.27□□□□□ -0.29
TSPAN4-209ENST00000409543 H3BVH4 76 aa13.27□□□□□ -0.29
TSPAN4-209ENST00000409543 S100A9P06702 114 aaKnown RBP13.27□□□□□ -0.29
TSPAN4-209ENST00000409543 CRYGDP07320 174 aa13.27□□□□□ -0.29
TSPAN4-209ENST00000409543 H2AFB1P0C5Y9 115 aa13.27□□□□□ -0.29
TSPAN4-209ENST00000409543 ARMS2P0C7Q2 107 aa13.27□□□□□ -0.29
TSPAN4-209ENST00000409543 ERVFC1-1P60608 527 aa13.27□□□□□ -0.29
TSPAN4-209ENST00000409543 Q6ZSN1 163 aa13.27□□□□□ -0.29
TSPAN4-209ENST00000409543 SYT8Q8NBV8 401 aa13.27□□□□□ -0.29
TSPAN4-209ENST00000409543 TRAV8-6A0A0B4J262 113 aa13.26□□□□□ -0.29
TSPAN4-209ENST00000409543 A0A1B0GV50 99 aa13.26□□□□□ -0.29
TSPAN4-209ENST00000409543 GRIFINA4D1Z8 144 aa13.26□□□□□ -0.29
TSPAN4-209ENST00000409543 PFDN1O60925 122 aa13.26□□□□□ -0.29
TSPAN4-209ENST00000409543 TPT1P13693 172 aaKnown RBP13.26□□□□□ -0.29
TSPAN4-209ENST00000409543 LINC01559Q495D7 138 aa13.26□□□□□ -0.29
TSPAN4-209ENST00000409543 DMRTA1Q5VZB9 504 aa13.26□□□□□ -0.29
TSPAN4-209ENST00000409543 ATP6V0E2Q8NHE4 81 aa13.26□□□□□ -0.29
TSPAN4-209ENST00000409543 EREGO14944 169 aa13.25□□□□□ -0.29
TSPAN4-209ENST00000409543 LINC01556Q5JQF7 62 aa13.25□□□□□ -0.29
TSPAN4-209ENST00000409543 LELP1Q5T871 98 aa13.25□□□□□ -0.29
TSPAN4-209ENST00000409543 UFSP1Q6NVU6 142 aa13.25□□□□□ -0.29
TSPAN4-209ENST00000409543 GTSF1LQ9H1H1 148 aa13.25□□□□□ -0.29
TSPAN4-209ENST00000409543 JPT2Q9H910 190 aa13.25□□□□□ -0.29
TSPAN4-209ENST00000409543 SCRT2Q9NQ03 307 aa13.25□□□□□ -0.29
TSPAN4-209ENST00000409543 HSPG2P98160 4391 aa13.25□□□□□ -0.29
TSPAN4-209ENST00000409543 OR10J3Q5JRS4 329 aa13.24□□□□□ -0.29
TSPAN4-209ENST00000409543 SAMD10Q9BYL1 202 aa13.24□□□□□ -0.29
TSPAN4-209ENST00000409543 PGPEP1Q9NXJ5 209 aa13.24□□□□□ -0.29
TSPAN4-209ENST00000409543 TMSB15BA0A087X1C1 80 aa13.23□□□□□ -0.29
TSPAN4-209ENST00000409543 SCO2A0A1W2PP80 73 aa13.23□□□□□ -0.29
TSPAN4-209ENST00000409543 RHODO00212 210 aa13.23□□□□□ -0.29
TSPAN4-209ENST00000409543 PHLDA3Q9Y5J5 127 aa13.23□□□□□ -0.29
TSPAN4-209ENST00000409543 A0A087WTM6 91 aa13.22□□□□□ -0.29
TSPAN4-209ENST00000409543 LINC00694P0DN24 101 aa13.22□□□□□ -0.29
TSPAN4-209ENST00000409543 MLST8Q9BVC4 326 aa13.22□□□□□ -0.29
TSPAN4-209ENST00000409543 GAGE12JA6NER3 117 aa13.21□□□□□ -0.29
TSPAN4-209ENST00000409543 IBA57-AS1B1ANH7 110 aa13.21□□□□□ -0.29
TSPAN4-209ENST00000409543 GAGE1Q13065 139 aa13.21□□□□□ -0.29
TSPAN4-209ENST00000409543 GAGE4Q13068 117 aa13.21□□□□□ -0.29
TSPAN4-209ENST00000409543 GAGE5Q13069 117 aa13.21□□□□□ -0.29
TSPAN4-209ENST00000409543 GAGE13Q4V321 117 aa13.21□□□□□ -0.29
TSPAN4-209ENST00000409543 BAGE2Q86Y30 109 aa13.21□□□□□ -0.29
TSPAN4-209ENST00000409543 SFRP2Q96HF1 295 aa13.21□□□□□ -0.29
TSPAN4-209ENST00000409543 TRAV1-1A0A0B4J248 108 aa13.2□□□□□ -0.3
TSPAN4-209ENST00000409543 M0R381 172 aa13.2□□□□□ -0.3
TSPAN4-209ENST00000409543 RAB5CP51148 216 aa13.2□□□□□ -0.3
TSPAN4-209ENST00000409543 EIF5AL1Q6IS14 154 aaKnown RBP13.2□□□□□ -0.3
TSPAN4-209ENST00000409543 CDPF1Q6NVV7 123 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 370.7 ms