RNA–Protein interactions for RNA: ENST00000408509.1

MIR548F3-201, Transcript of microRNA 548f-3, humanhuman

BASIC

Gene MIR548F3, Length 87 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F3-201ENST00000408509 BRK1Q8WUW1 75 aa-5.44□□□□□ -3.28
MIR548F3-201ENST00000408509 EEF1AKMT1Q8WVE0 214 aa-5.44□□□□□ -3.28
MIR548F3-201ENST00000408509 PP6455Q8WZ26 134 aa-5.44□□□□□ -3.28
MIR548F3-201ENST00000408509 IFI27L1Q96BM0 104 aa-5.44□□□□□ -3.28
MIR548F3-201ENST00000408509 UQCC1Q9NVA1 299 aa-5.44□□□□□ -3.28
MIR548F3-201ENST00000408509 MYH7P12883 1935 aa-5.44□□□□□ -3.28
MIR548F3-201ENST00000408509 PARP14Q460N5 1801 aa-5.45□□□□□ -3.28
MIR548F3-201ENST00000408509 CXorf51AA0A1B0GTR3 108 aa-5.45□□□□□ -3.28
MIR548F3-201ENST00000408509 RER1O15258 196 aa-5.45□□□□□ -3.28
MIR548F3-201ENST00000408509 EDF1O60869 148 aaKnown RBP-5.45□□□□□ -3.28
MIR548F3-201ENST00000408509 BTG2P78543 158 aa-5.45□□□□□ -3.28
MIR548F3-201ENST00000408509 SSX9Q7RTT3 188 aa-5.45□□□□□ -3.28
MIR548F3-201ENST00000408509 VPS25Q9BRG1 176 aa-5.45□□□□□ -3.28
MIR548F3-201ENST00000408509 HYPKQ9NX55 129 aa-5.45□□□□□ -3.28
MIR548F3-201ENST00000408509 IBTKQ9P2D0 1353 aaPredicted RBP-5.45□□□□□ -3.28
MIR548F3-201ENST00000408509 MTX2O75431 263 aa-5.46□□□□□ -3.28
MIR548F3-201ENST00000408509 IFNA21P01568 189 aa-5.46□□□□□ -3.28
MIR548F3-201ENST00000408509 TRACP01848 142 aa-5.46□□□□□ -3.28
MIR548F3-201ENST00000408509 SPANXN2Q5MJ10 180 aa-5.46□□□□□ -3.28
MIR548F3-201ENST00000408509 SYCE1Q8N0S2 351 aa-5.46□□□□□ -3.28
MIR548F3-201ENST00000408509 CCDC12Q8WUD4 166 aaPredicted RBP-5.46□□□□□ -3.28
MIR548F3-201ENST00000408509 DTNBP1Q96EV8 351 aa-5.46□□□□□ -3.28
MIR548F3-201ENST00000408509 C2orf50Q96LR7 162 aa-5.46□□□□□ -3.28
MIR548F3-201ENST00000408509 TMEM237Q96Q45 408 aa-5.46□□□□□ -3.28
MIR548F3-201ENST00000408509 LYRM4Q9HD34 91 aa-5.46□□□□□ -3.28
MIR548F3-201ENST00000408509 A0A087WUJ7 227 aa-5.47□□□□□ -3.29
MIR548F3-201ENST00000408509 CTXND1A0A1B0GTU2 59 aa-5.47□□□□□ -3.29
MIR548F3-201ENST00000408509 DAPL1A0PJW8 107 aa-5.47□□□□□ -3.29
MIR548F3-201ENST00000408509 CCL22O00626 93 aa-5.47□□□□□ -3.29
MIR548F3-201ENST00000408509 CENPQQ7L2Z9 268 aaPredicted RBP-5.47□□□□□ -3.29
MIR548F3-201ENST00000408509 COMMD1Q8N668 190 aa-5.47□□□□□ -3.29
MIR548F3-201ENST00000408509 FAM216BQ8N7L0 139 aa-5.47□□□□□ -3.29
MIR548F3-201ENST00000408509 MAP1LC3AQ9H492 121 aa-5.47□□□□□ -3.29
MIR548F3-201ENST00000408509 CEP164Q9UPV0 1460 aa-5.47□□□□□ -3.29
MIR548F3-201ENST00000408509 CLDN24A6NM45 220 aa-5.48□□□□□ -3.29
MIR548F3-201ENST00000408509 CST7O76096 145 aa-5.48□□□□□ -3.29
MIR548F3-201ENST00000408509 DYNLT3P51808 116 aa-5.48□□□□□ -3.29
MIR548F3-201ENST00000408509 UBE2HP62256 183 aa-5.48□□□□□ -3.29
MIR548F3-201ENST00000408509 LRRC23Q53EV4 343 aaPredicted RBP-5.48□□□□□ -3.29
MIR548F3-201ENST00000408509 C9orf116Q5BN46 136 aaPredicted RBP-5.48□□□□□ -3.29
MIR548F3-201ENST00000408509 BCL2L15Q5TBC7 163 aa-5.48□□□□□ -3.29
MIR548F3-201ENST00000408509 ATP6V1E2Q96A05 226 aa-5.48□□□□□ -3.29
MIR548F3-201ENST00000408509 PRELID3AQ96N28 172 aa-5.48□□□□□ -3.29
MIR548F3-201ENST00000408509 ERG28Q9UKR5 140 aa-5.48□□□□□ -3.29
MIR548F3-201ENST00000408509 TRAPPC8Q9Y2L5 1435 aa-5.48□□□□□ -3.29
MIR548F3-201ENST00000408509 AQRO60306 1485 aaKnown RBP eCLIP-5.49□□□□□ -3.29
MIR548F3-201ENST00000408509 IFNA5P01569 189 aa-5.49□□□□□ -3.29
MIR548F3-201ENST00000408509 GTF2A1P52655 376 aaPredicted RBP-5.49□□□□□ -3.29
MIR548F3-201ENST00000408509 HADHBP55084 474 aaKnown RBP-5.49□□□□□ -3.29
MIR548F3-201ENST00000408509 AP3S2P59780 193 aa-5.49□□□□□ -3.29
MIR548F3-201ENST00000408509 C6orf183Q5T699 404 aa-5.49□□□□□ -3.29
MIR548F3-201ENST00000408509 CST9Q5W186 159 aa-5.49□□□□□ -3.29
MIR548F3-201ENST00000408509 FAM81AQ8TBF8 368 aa-5.49□□□□□ -3.29
MIR548F3-201ENST00000408509 IFT81Q8WYA0 676 aa-5.49□□□□□ -3.29
MIR548F3-201ENST00000408509 UBE2D4Q9Y2X8 147 aa-5.49□□□□□ -3.29
MIR548F3-201ENST00000408509 TMEM56-RWDD3S4R434 201 aa-5.49□□□□□ -3.29
MIR548F3-201ENST00000408509 FRYLO94915 3013 aa-5.5□□□□□ -3.29
MIR548F3-201ENST00000408509 K7ERJ3 54 aa-5.5□□□□□ -3.29
MIR548F3-201ENST00000408509 NDUFA6P56556 154 aa-5.5□□□□□ -3.29
MIR548F3-201ENST00000408509 TMEM53Q6P2H8 277 aa-5.5□□□□□ -3.29
MIR548F3-201ENST00000408509 OR6N2Q8NGY6 317 aa-5.5□□□□□ -3.29
MIR548F3-201ENST00000408509 MOSPD1Q9UJG1 213 aa-5.5□□□□□ -3.29
MIR548F3-201ENST00000408509 MPC1Q9Y5U8 109 aa-5.5□□□□□ -3.29
MIR548F3-201ENST00000408509 HCG22E2RYF7 251 aa-5.51□□□□□ -3.29
MIR548F3-201ENST00000408509 TMEM256-PLSCR3K7ERE1 68 aa-5.51□□□□□ -3.29
MIR548F3-201ENST00000408509 IFNA4P05014 189 aa-5.51□□□□□ -3.29
MIR548F3-201ENST00000408509 SMIM10L2AP0DMW4 78 aa-5.51□□□□□ -3.29
MIR548F3-201ENST00000408509 SMIM10L2BP0DMW5 78 aa-5.51□□□□□ -3.29
MIR548F3-201ENST00000408509 PEX19P40855 299 aa-5.51□□□□□ -3.29
MIR548F3-201ENST00000408509 SSX6Q7RTT6 188 aa-5.51□□□□□ -3.29
MIR548F3-201ENST00000408509 TMEM86BQ8N661 226 aa-5.51□□□□□ -3.29
MIR548F3-201ENST00000408509 ANKRD29Q8N6D5 301 aa-5.51□□□□□ -3.29
MIR548F3-201ENST00000408509 SMIM7Q9BQ49 75 aa-5.51□□□□□ -3.29
MIR548F3-201ENST00000408509 MAP1LC3BQ9GZQ8 125 aa-5.51□□□□□ -3.29
MIR548F3-201ENST00000408509 NEO1Q92859 1461 aa-5.51□□□□□ -3.29
MIR548F3-201ENST00000408509 MMP24-AS1A0A0U1RRL7 71 aa-5.52□□□□□ -3.29
MIR548F3-201ENST00000408509 WBP4O75554 376 aaKnown RBP-5.52□□□□□ -3.29
MIR548F3-201ENST00000408509 SPAG6O75602 509 aa-5.52□□□□□ -3.29
MIR548F3-201ENST00000408509 IFNA1P01562 189 aa-5.52□□□□□ -3.29
MIR548F3-201ENST00000408509 SERPINA6P08185 405 aa-5.52□□□□□ -3.29
MIR548F3-201ENST00000408509 LIMS3P0CW19 117 aa-5.52□□□□□ -3.29
MIR548F3-201ENST00000408509 LIMS4P0CW20 117 aa-5.52□□□□□ -3.29
MIR548F3-201ENST00000408509 HSP90AA4PQ58FG1 418 aa-5.52□□□□□ -3.29
MIR548F3-201ENST00000408509 NDUFA11Q86Y39 141 aa-5.52□□□□□ -3.29
MIR548F3-201ENST00000408509 KRT222Q8N1A0 295 aa-5.52□□□□□ -3.29
MIR548F3-201ENST00000408509 STOML3Q8TAV4 291 aa-5.52□□□□□ -3.29
MIR548F3-201ENST00000408509 GEMIN7Q9H840 131 aaKnown RBP-5.52□□□□□ -3.29
MIR548F3-201ENST00000408509 PRTFDC1Q9NRG1 225 aa-5.52□□□□□ -3.29
MIR548F3-201ENST00000408509 GCNT4Q9P109 453 aa-5.52□□□□□ -3.29
MIR548F3-201ENST00000408509 WRNQ14191 1432 aaPredicted RBP eCLIP-5.52□□□□□ -3.29
MIR548F3-201ENST00000408509 TRAV26-2A0A0B4J265 109 aa-5.53□□□□□ -3.29
MIR548F3-201ENST00000408509 J3QRK9 145 aa-5.53□□□□□ -3.29
MIR548F3-201ENST00000408509 EIF3JO75822 258 aaKnown RBP-5.53□□□□□ -3.29
MIR548F3-201ENST00000408509 HLA-DRB1P01911 266 aa-5.53□□□□□ -3.29
MIR548F3-201ENST00000408509 COX17Q14061 63 aa-5.53□□□□□ -3.29
MIR548F3-201ENST00000408509 SPCS2Q15005 226 aa-5.53□□□□□ -3.29
MIR548F3-201ENST00000408509 MRPL52Q86TS9 123 aaKnown RBP-5.53□□□□□ -3.29
MIR548F3-201ENST00000408509 SLC51BQ86UW2 128 aa-5.53□□□□□ -3.29
MIR548F3-201ENST00000408509 FAM228AQ86W67 206 aa-5.53□□□□□ -3.29
MIR548F3-201ENST00000408509 RASD2Q96D21 266 aa-5.53□□□□□ -3.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms