RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 U3KQA8 63 aa10.11□□□□□ -0.79
RNF43-201ENST00000407977 CACNA1HO95180 2353 aa10.11□□□□□ -0.79
RNF43-201ENST00000407977 IGLV11-55A0A075B6I3 123 aa10.11□□□□□ -0.79
RNF43-201ENST00000407977 DAZ2Q13117 558 aaKnown RBP10.11□□□□□ -0.79
RNF43-201ENST00000407977 DAZ4Q86SG3 579 aaKnown RBP10.11□□□□□ -0.79
RNF43-201ENST00000407977 DAZ3Q9NR90 486 aaKnown RBP10.11□□□□□ -0.79
RNF43-201ENST00000407977 RS1O15537 224 aa10.11□□□□□ -0.79
RNF43-201ENST00000407977 TRAV4A0A0B4J268 109 aa10.11□□□□□ -0.79
RNF43-201ENST00000407977 K7ENP7 123 aa10.1□□□□□ -0.79
RNF43-201ENST00000407977 ODF1Q14990 250 aa10.1□□□□□ -0.79
RNF43-201ENST00000407977 DIDO1Q9BTC0 2240 aaKnown RBP10.1□□□□□ -0.79
RNF43-201ENST00000407977 BRWD3Q6RI45 1802 aa10.1□□□□□ -0.79
RNF43-201ENST00000407977 XCL1P47992 114 aa10.1□□□□□ -0.79
RNF43-201ENST00000407977 MSRB1Q9NZV6 116 aa10.09□□□□□ -0.79
RNF43-201ENST00000407977 PKIGQ9Y2B9 76 aa10.09□□□□□ -0.79
RNF43-201ENST00000407977 C22orf46C9J442 243 aa10.09□□□□□ -0.79
RNF43-201ENST00000407977 C9orf47Q6ZRZ4 202 aa10.09□□□□□ -0.79
RNF43-201ENST00000407977 BAALCQ8WXS3 180 aa10.09□□□□□ -0.79
RNF43-201ENST00000407977 FAM215AQ9Y5M1 114 aa10.09□□□□□ -0.79
RNF43-201ENST00000407977 BUB3O43684 328 aa10.09□□□□□ -0.79
RNF43-201ENST00000407977 MP68P56378 58 aa10.09□□□□□ -0.79
RNF43-201ENST00000407977 RNF223E7ERA6 249 aa10.09□□□□□ -0.79
RNF43-201ENST00000407977 FGF23Q9GZV9 251 aaPredicted RBP10.09□□□□□ -0.79
RNF43-201ENST00000407977 CTSZQ9UBR2 303 aa10.09□□□□□ -0.79
RNF43-201ENST00000407977 ZNF407Q9C0G0 2248 aa10.09□□□□□ -0.79
RNF43-201ENST00000407977 WI2-2373I1.2A0A1W2PRP0 233 aa10.08□□□□□ -0.8
RNF43-201ENST00000407977 LINC00643Q86TS7 51 aa10.08□□□□□ -0.8
RNF43-201ENST00000407977 LGALS9O00182 355 aa10.08□□□□□ -0.8
RNF43-201ENST00000407977 C16orf54Q6UWD8 224 aa10.08□□□□□ -0.8
RNF43-201ENST00000407977 USF3Q68DE3 2245 aa10.08□□□□□ -0.8
RNF43-201ENST00000407977 CTSGP08311 255 aa10.08□□□□□ -0.8
RNF43-201ENST00000407977 C11orf1Q9H5F2 150 aa10.08□□□□□ -0.8
RNF43-201ENST00000407977 HOXB4P17483 251 aaPredicted RBP10.08□□□□□ -0.8
RNF43-201ENST00000407977 PDE6GP18545 87 aa10.08□□□□□ -0.8
RNF43-201ENST00000407977 CACNA1BQ00975 2339 aa10.08□□□□□ -0.8
RNF43-201ENST00000407977 TSC2P49815 1807 aa10.08□□□□□ -0.8
RNF43-201ENST00000407977 CENPVL3A0A0U1RRI6 287 aa10.08□□□□□ -0.8
RNF43-201ENST00000407977 C2orf70A6NJV1 201 aa10.08□□□□□ -0.8
RNF43-201ENST00000407977 DEFB121Q5J5C9 76 aa10.08□□□□□ -0.8
RNF43-201ENST00000407977 C19orf71A6NCJ1 209 aa10.07□□□□□ -0.8
RNF43-201ENST00000407977 COX7B2Q8TF08 81 aa10.07□□□□□ -0.8
RNF43-201ENST00000407977 TRAV26-1A0A087WT03 109 aa10.07□□□□□ -0.8
RNF43-201ENST00000407977 IGKV3D-7A0A0C4DH55 119 aa10.07□□□□□ -0.8
RNF43-201ENST00000407977 DOCK7Q96N67 2140 aa10.07□□□□□ -0.8
RNF43-201ENST00000407977 NOP10Q9NPE3 64 aaKnown RBP10.07□□□□□ -0.8
RNF43-201ENST00000407977 NCOR1O75376 2440 aa10.07□□□□□ -0.8
RNF43-201ENST00000407977 MYLKQ15746 1914 aa10.07□□□□□ -0.8
RNF43-201ENST00000407977 IGHV7-81A0A0B4J1V7 117 aa10.06□□□□□ -0.8
RNF43-201ENST00000407977 MRPL23Q16540 153 aaKnown RBP10.06□□□□□ -0.8
RNF43-201ENST00000407977 PLXNA2O75051 1894 aa10.06□□□□□ -0.8
RNF43-201ENST00000407977 K7EQD1 137 aa10.06□□□□□ -0.8
RNF43-201ENST00000407977 VSIG2Q96IQ7 327 aa10.06□□□□□ -0.8
RNF43-201ENST00000407977 ABCA4P78363 2273 aa10.06□□□□□ -0.8
RNF43-201ENST00000407977 NREPQ16612 68 aa10.06□□□□□ -0.8
RNF43-201ENST00000407977 HIST2H2BCQ6DN03 193 aa10.06□□□□□ -0.8
RNF43-201ENST00000407977 CXCL5P42830 114 aa10.05□□□□□ -0.8
RNF43-201ENST00000407977 C5orf38Q86SI9 138 aa10.05□□□□□ -0.8
RNF43-201ENST00000407977 SHANK1Q9Y566 2161 aa10.05□□□□□ -0.8
RNF43-201ENST00000407977 A0A1B0GXF2 115 aa10.05□□□□□ -0.8
RNF43-201ENST00000407977 C16orf74Q96GX8 76 aa10.05□□□□□ -0.8
RNF43-201ENST00000407977 ETDCA0A1B0GVM5 59 aa10.05□□□□□ -0.8
RNF43-201ENST00000407977 TTTY13Q9BZ97 58 aa10.05□□□□□ -0.8
RNF43-201ENST00000407977 EML6Q6ZMW3 1958 aa10.05□□□□□ -0.8
RNF43-201ENST00000407977 COX7A2LO14548 114 aa10.05□□□□□ -0.8
RNF43-201ENST00000407977 MALRD1Q5VYJ5 2156 aa10.04□□□□□ -0.8
RNF43-201ENST00000407977 NDUFA11Q86Y39 141 aa10.04□□□□□ -0.8
RNF43-201ENST00000407977 VPREB3Q9UKI3 123 aa10.04□□□□□ -0.8
RNF43-201ENST00000407977 IGHV1-58A0A0C4DH39 117 aa10.04□□□□□ -0.8
RNF43-201ENST00000407977 K7EMT4 169 aa10.04□□□□□ -0.8
RNF43-201ENST00000407977 Q8N1Y9 231 aa10.04□□□□□ -0.8
RNF43-201ENST00000407977 C5orf47Q569G3 176 aa10.03□□□□□ -0.8
RNF43-201ENST00000407977 PRR30Q53SZ7 412 aaPredicted RBP10.03□□□□□ -0.8
RNF43-201ENST00000407977 TMEM256-PLSCR3K7ERE1 68 aa10.03□□□□□ -0.8
RNF43-201ENST00000407977 CRYGBP07316 175 aa10.03□□□□□ -0.8
RNF43-201ENST00000407977 CLPSL2Q6UWE3 100 aa10.03□□□□□ -0.8
RNF43-201ENST00000407977 FNDC1Q4ZHG4 1894 aaPredicted RBP10.03□□□□□ -0.8
RNF43-201ENST00000407977 NDUFB1O75438 58 aa10.02□□□□□ -0.8
RNF43-201ENST00000407977 IGKV1OR2-108A0A075B7D4 117 aa10.02□□□□□ -0.81
RNF43-201ENST00000407977 Q6ZUT4 128 aa10.02□□□□□ -0.81
RNF43-201ENST00000407977 CHD3Q12873 2000 aaKnown RBP10.02□□□□□ -0.81
RNF43-201ENST00000407977 TMEM61Q8N0U2 210 aa10.02□□□□□ -0.81
RNF43-201ENST00000407977 SPATA25Q9BR10 227 aa10.02□□□□□ -0.81
RNF43-201ENST00000407977 RPL39P62891 51 aaKnown RBP10.02□□□□□ -0.81
RNF43-201ENST00000407977 C3orf56Q8N813 242 aa10.02□□□□□ -0.81
RNF43-201ENST00000407977 COL6A6A6NMZ7 2263 aa10.02□□□□□ -0.81
RNF43-201ENST00000407977 LECT2O14960 151 aa10.02□□□□□ -0.81
RNF43-201ENST00000407977 SP5Q6BEB4 398 aaPredicted RBP10.02□□□□□ -0.81
RNF43-201ENST00000407977 WFDC9Q8NEX5 89 aa10.02□□□□□ -0.81
RNF43-201ENST00000407977 TRBV7-3A0A075B6L6 115 aa10.01□□□□□ -0.81
RNF43-201ENST00000407977 ZNF503Q96F45 646 aa10.01□□□□□ -0.81
RNF43-201ENST00000407977 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.01□□□□□ -0.818e-8■■■□□ 18.9
RNF43-201ENST00000407977 RIF1Q5UIP0 2472 aaKnown RBP10.01□□□□□ -0.81
RNF43-201ENST00000407977 PRSS33Q8NF86 280 aa10.01□□□□□ -0.81
RNF43-201ENST00000407977 RLFQ13129 1914 aa10.01□□□□□ -0.81
RNF43-201ENST00000407977 TEX22C9J3V5 150 aa10.01□□□□□ -0.81
RNF43-201ENST00000407977 NDUFS5O43920 106 aa10.01□□□□□ -0.81
RNF43-201ENST00000407977 IGLV2-14P01704 120 aa10.01□□□□□ -0.81
RNF43-201ENST00000407977 AJUBAQ96IF1 538 aa10.01□□□□□ -0.81
RNF43-201ENST00000407977 CAMK2N2Q96S95 79 aa10.01□□□□□ -0.81
RNF43-201ENST00000407977 IGLV2-23P01705 113 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms