RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 IFI27P40305 119 aaPredicted RBP9.72□□□□□ -0.85
SMARCB1-203ENST00000407082 NUTF2P61970 127 aaKnown RBP9.72□□□□□ -0.85
SMARCB1-203ENST00000407082 COL5A1-AS1Q5SY13 56 aa9.72□□□□□ -0.85
SMARCB1-203ENST00000407082 SPANXN1Q5VSR9 72 aa9.72□□□□□ -0.85
SMARCB1-203ENST00000407082 LINC01545Q5VT33 79 aa9.72□□□□□ -0.85
SMARCB1-203ENST00000407082 C10orf99Q6UWK7 81 aa9.72□□□□□ -0.85
SMARCB1-203ENST00000407082 DPF1Q92782 380 aa9.72□□□□□ -0.85
SMARCB1-203ENST00000407082 LINC01546A6NGU7 62 aa9.71□□□□□ -0.86
SMARCB1-203ENST00000407082 SOCS3O14543 225 aa9.71□□□□□ -0.86
SMARCB1-203ENST00000407082 PPP1R17O96001 155 aa9.71□□□□□ -0.86
SMARCB1-203ENST00000407082 PSMB8P28062 276 aa9.71□□□□□ -0.86
SMARCB1-203ENST00000407082 UNQ9165/PRO28630Q6UXU0 137 aa9.71□□□□□ -0.86
SMARCB1-203ENST00000407082 MRAP2Q96G30 205 aa9.71□□□□□ -0.86
SMARCB1-203ENST00000407082 KLK15Q9H2R5 256 aa9.71□□□□□ -0.86
SMARCB1-203ENST00000407082 IGKV3D-20A0A0C4DH25 116 aa9.7□□□□□ -0.86
SMARCB1-203ENST00000407082 LOC389332A0A1B0GUA5 103 aa9.7□□□□□ -0.86
SMARCB1-203ENST00000407082 A0A1B0GV90 55 aa9.7□□□□□ -0.86
SMARCB1-203ENST00000407082 PRSS47A8MTI9 375 aa9.7□□□□□ -0.86
SMARCB1-203ENST00000407082 CD28P10747 220 aa9.7□□□□□ -0.86
SMARCB1-203ENST00000407082 S100A4P26447 101 aaKnown RBP9.7□□□□□ -0.86
SMARCB1-203ENST00000407082 ASIPP42127 132 aa9.7□□□□□ -0.86
SMARCB1-203ENST00000407082 LGALS9BQ3B8N2 356 aa9.7□□□□□ -0.86
SMARCB1-203ENST00000407082 TM4SF20Q53R12 229 aa9.7□□□□□ -0.86
SMARCB1-203ENST00000407082 LGALS9CQ6DKI2 356 aa9.7□□□□□ -0.86
SMARCB1-203ENST00000407082 OR8A1Q8NGG7 326 aa9.7□□□□□ -0.86
SMARCB1-203ENST00000407082 LGALS9O00182 355 aa9.69□□□□□ -0.86
SMARCB1-203ENST00000407082 EREGO14944 169 aa9.69□□□□□ -0.86
SMARCB1-203ENST00000407082 TRBV12-3P01733 135 aa9.69□□□□□ -0.86
SMARCB1-203ENST00000407082 IGLL1P15814 213 aa9.69□□□□□ -0.86
SMARCB1-203ENST00000407082 LEPP41159 167 aa9.69□□□□□ -0.86
SMARCB1-203ENST00000407082 TCTEX1D4Q5JR98 221 aa9.69□□□□□ -0.86
SMARCB1-203ENST00000407082 APRG1Q8IVJ8 170 aa9.69□□□□□ -0.86
SMARCB1-203ENST00000407082 DEFB125Q8N687 156 aa9.69□□□□□ -0.86
SMARCB1-203ENST00000407082 LINC00469Q8N7U9 141 aa9.69□□□□□ -0.86
SMARCB1-203ENST00000407082 OR1N2Q8NGR9 330 aa9.69□□□□□ -0.86
SMARCB1-203ENST00000407082 RNF185Q96GF1 192 aa9.69□□□□□ -0.86
SMARCB1-203ENST00000407082 ODF3Q96PU9 254 aa9.69□□□□□ -0.86
SMARCB1-203ENST00000407082 COL7A1Q02388 2944 aa9.68□□□□□ -0.86
SMARCB1-203ENST00000407082 K7EIL1 84 aa9.68□□□□□ -0.86
SMARCB1-203ENST00000407082 K7EMI3 77 aa9.68□□□□□ -0.86
SMARCB1-203ENST00000407082 TNFRSF6BO95407 300 aa9.68□□□□□ -0.86
SMARCB1-203ENST00000407082 G0S2P27469 103 aa9.68□□□□□ -0.86
SMARCB1-203ENST00000407082 FCER1GP30273 86 aa9.68□□□□□ -0.86
SMARCB1-203ENST00000407082 TSPOP30536 169 aa9.68□□□□□ -0.86
SMARCB1-203ENST00000407082 SNRPD3P62318 126 aaKnown RBP9.68□□□□□ -0.86
SMARCB1-203ENST00000407082 SLC25A34Q6PIV7 304 aa9.68□□□□□ -0.86
SMARCB1-203ENST00000407082 LCNL1Q6ZST4 164 aa9.68□□□□□ -0.86
SMARCB1-203ENST00000407082 ATOH7Q8N100 152 aa9.68□□□□□ -0.86
SMARCB1-203ENST00000407082 Q8N8P6 123 aa9.68□□□□□ -0.86
SMARCB1-203ENST00000407082 C20orf173Q96LM9 149 aa9.68□□□□□ -0.86
SMARCB1-203ENST00000407082 LINC01549A6NIU2 74 aa9.67□□□□□ -0.86
SMARCB1-203ENST00000407082 TCAPO15273 167 aa9.67□□□□□ -0.86
SMARCB1-203ENST00000407082 DUSP14O95147 198 aaKnown RBP9.67□□□□□ -0.86
SMARCB1-203ENST00000407082 NPYP01303 97 aa9.67□□□□□ -0.86
SMARCB1-203ENST00000407082 LGALS1P09382 135 aaKnown RBP9.67□□□□□ -0.86
SMARCB1-203ENST00000407082 KHDC1LQ5JSQ8 128 aa9.67□□□□□ -0.86
SMARCB1-203ENST00000407082 OR2K2Q8NGT1 345 aa9.67□□□□□ -0.86
SMARCB1-203ENST00000407082 IFI27L1Q96BM0 104 aa9.67□□□□□ -0.86
SMARCB1-203ENST00000407082 FAM19A4Q96LR4 140 aa9.67□□□□□ -0.86
SMARCB1-203ENST00000407082 UBE2E2Q96LR5 201 aa9.67□□□□□ -0.86
SMARCB1-203ENST00000407082 CITED2Q99967 270 aaPredicted RBP9.67□□□□□ -0.86
SMARCB1-203ENST00000407082 TIMM8BQ9Y5J9 83 aaPredicted RBP9.67□□□□□ -0.86
SMARCB1-203ENST00000407082 ATP5LO75964 103 aa9.66□□□□□ -0.86
SMARCB1-203ENST00000407082 PRB4P10163 310 aaPredicted RBP9.66□□□□□ -0.86
SMARCB1-203ENST00000407082 ZFAND2AQ8N6M9 145 aa9.66□□□□□ -0.86
SMARCB1-203ENST00000407082 RNF152Q8N8N0 203 aa9.66□□□□□ -0.86
SMARCB1-203ENST00000407082 DPH3P1Q9H4G8 78 aa9.66□□□□□ -0.86
SMARCB1-203ENST00000407082 GOLT1BQ9Y3E0 138 aa9.66□□□□□ -0.86
SMARCB1-203ENST00000407082 PHLDA3Q9Y5J5 127 aa9.66□□□□□ -0.86
SMARCB1-203ENST00000407082 TSSC4Q9Y5U2 329 aaPredicted RBP9.66□□□□□ -0.86
SMARCB1-203ENST00000407082 MUC21A0A0G2JKD1 596 aa9.65□□□□□ -0.86
SMARCB1-203ENST00000407082 MUC21A0A140T8X8 626 aa9.65□□□□□ -0.86
SMARCB1-203ENST00000407082 A0A1W2PRX2 142 aa9.65□□□□□ -0.86
SMARCB1-203ENST00000407082 M0R381 172 aa9.65□□□□□ -0.86
SMARCB1-203ENST00000407082 MUC21Q5SSG8 566 aa9.65□□□□□ -0.86
SMARCB1-203ENST00000407082 LINC00173Q6ZV60 143 aa9.65□□□□□ -0.86
SMARCB1-203ENST00000407082 ZNF575Q86XF7 245 aa9.65□□□□□ -0.86
SMARCB1-203ENST00000407082 C20orf78Q9BR46 151 aa9.65□□□□□ -0.86
SMARCB1-203ENST00000407082 MSRB1Q9NZV6 116 aa9.65□□□□□ -0.86
SMARCB1-203ENST00000407082 C11orf21Q9P2W6 132 aa9.65□□□□□ -0.86
SMARCB1-203ENST00000407082 RNASE4P34096 147 aaKnown RBP9.64□□□□□ -0.87
SMARCB1-203ENST00000407082 BATFQ16520 125 aa9.64□□□□□ -0.87
SMARCB1-203ENST00000407082 FAM159AQ6UWV7 190 aa9.64□□□□□ -0.87
SMARCB1-203ENST00000407082 NDUFA11Q86Y39 141 aa9.64□□□□□ -0.87
SMARCB1-203ENST00000407082 MYOZ3Q8TDC0 251 aa9.64□□□□□ -0.87
SMARCB1-203ENST00000407082 H0Y8G0 127 aa9.63□□□□□ -0.87
SMARCB1-203ENST00000407082 SMKR1H3BMG3 65 aa9.63□□□□□ -0.87
SMARCB1-203ENST00000407082 H3BVH4 76 aa9.63□□□□□ -0.87
SMARCB1-203ENST00000407082 NCR2O95944 276 aa9.63□□□□□ -0.87
SMARCB1-203ENST00000407082 SMIM17P0DL12 118 aa9.63□□□□□ -0.87
SMARCB1-203ENST00000407082 LAGE3Q14657 143 aa9.63□□□□□ -0.87
SMARCB1-203ENST00000407082 ORMDL2Q53FV1 153 aa9.63□□□□□ -0.87
SMARCB1-203ENST00000407082 AP1S3Q96PC3 154 aa9.63□□□□□ -0.87
SMARCB1-203ENST00000407082 SCRT2Q9NQ03 307 aa9.63□□□□□ -0.87
SMARCB1-203ENST00000407082 TRAV2A0A0B4J234 112 aa9.62□□□□□ -0.87
SMARCB1-203ENST00000407082 ADARB2-AS1A8MUL3 147 aa9.62□□□□□ -0.87
SMARCB1-203ENST00000407082 KLLNB2CW77 178 aa9.62□□□□□ -0.87
SMARCB1-203ENST00000407082 COX8AP10176 69 aa9.62□□□□□ -0.87
SMARCB1-203ENST00000407082 EVI2AP22794 236 aa9.62□□□□□ -0.87
SMARCB1-203ENST00000407082 GAGE1Q13065 139 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms