RNA–Protein interactions for RNA: ENST00000406848.1

GAPDHP42-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 42, humanhuman

BASIC

Gene GAPDHP42, Length 981 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP42-201ENST00000406848 TRAV26-1A0A087WT03 109 aa4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 TRAV1-1A0A0B4J248 108 aa4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 MAP1LC3B2A6NCE7 125 aa4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 M0R3E3 92 aa4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 HLA-DMBP28068 263 aa4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 FXYD7P58549 80 aa4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 DAZ2Q13117 558 aaKnown RBP4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 VAMP3Q15836 100 aa4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 Q6AWC8 147 aa4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 SVBPQ8N300 66 aa4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 TMEM75Q8N9X5 138 aa4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 SFT2D1Q8WV19 159 aa4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 KCNS1Q96KK3 526 aa4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 C18orf15Q96N68 181 aa4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 NDUFAF3Q9BU61 184 aa4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 MAP1LC3BQ9GZQ8 125 aa4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 SH3BGRL3Q9H299 93 aa4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 GEMIN7Q9H840 131 aaKnown RBP4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 EPDR1Q9UM22 224 aa4.04□□□□□ -1.76
GAPDHP42-201ENST00000406848 IGHV3OR16-12A0A075B7B8 117 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 TRAV21A0A0B4J279 112 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 TRBV6-1A0A0K0K1D8 114 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 SNURFLB1AK76 121 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 PRAC2D3DTV9 90 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 F8W036 122 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 H3BTX0 84 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 ZNF324O75467 553 aaPredicted RBP4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 SNAPINO95295 136 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 TCRAP04437 139 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 DEFB1P60022 68 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 DAD1P61803 113 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 HERV-K104P63124 156 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 SLAQ13239 276 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 LGALS9BQ3B8N2 356 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 TDRG1Q3Y452 100 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 FAM222AQ5U5X8 452 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 GFI1BQ5VTD9 330 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 ZFAND2AQ8N6M9 145 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 CYB561D1Q8N8Q1 229 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 PCNPQ8WW12 178 aaKnown RBP4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 ZFP30Q9Y2G7 519 aa4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 YTHDF2Q9Y5A9 579 aaKnown RBP4.03□□□□□ -1.76
GAPDHP42-201ENST00000406848 TRAV12-2A0A075B6T6 113 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 IGHV1OR15-1A0A075B7D0 117 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 DEFB131BA0A096LNP1 70 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 LCE6AA0A183 80 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 ZNF705GA8MUZ8 300 aaPredicted RBP4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 H3BNG1 76 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 NDUFS6O75380 124 aaKnown RBP4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 APOC3P02656 99 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 ATP5G1P05496 136 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 SNRPCP09234 159 aaKnown RBP4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 BCL2P10415 239 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 RNASE4P34096 147 aaKnown RBP4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 ATP5G3P48201 142 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 NANOS2P60321 138 aaKnown RBP4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 ERCC8Q13216 396 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 C12orf74Q32Q52 190 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 LGALS9CQ6DKI2 356 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 ZFAND6Q6FIF0 208 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 GOLT1AQ6ZVE7 132 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 ERASQ7Z444 233 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 COX8CQ7Z4L0 72 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 C15orf53Q8NAA6 179 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 FMC1Q96HJ9 113 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 VGLL1Q99990 258 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 SEC11CQ9BY50 192 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 GNG13Q9P2W3 67 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 KLF12Q9Y4X4 402 aa4.02□□□□□ -1.77
GAPDHP42-201ENST00000406848 IGKV2-40A0A087WW87 121 aaPredicted RBP4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 TRAV12-3A0A0B4J271 114 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 IGLV5-39A0A0G2JS06 123 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 A0A1B0GV50 99 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 TMEM218A2RU14 115 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 RBFOX3A6NFN3 312 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 FAM74A7A6NL05 159 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 FABP5P3A8MUU1 101 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 PDE6DO43924 150 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 IGKV2D-40P01614 121 aaPredicted RBP4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 PFN1P07737 140 aaKnown RBP4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 SFTA3P0C7M3 94 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 P0DMU3 169 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 FAM231AP0DMU4 169 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 FAM231CP0DMU5 169 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 TCL1AP56279 114 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 FLI1Q01543 452 aaPredicted RBP4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 ZNF726P1Q15940 193 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 FAM74A3Q4VXF1 159 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 SMUG1Q53HV7 270 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 SOHLH1Q5JUK2 328 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 ZNF506Q5JVG8 444 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 LINC00612Q8N6U2 182 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 PRSS3P2Q8NHM4 247 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 LYPD6BQ8NI32 183 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 PTH2Q96A98 100 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 SMIM12Q96EX1 92 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 VAX2Q9UIW0 290 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 PSG8Q9UQ74 426 aa4.01□□□□□ -1.77
GAPDHP42-201ENST00000406848 IGHV4-4A0A075B6R2 117 aa4□□□□□ -1.77
GAPDHP42-201ENST00000406848 IGLV5-52A0A0A0MRZ9 124 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms