RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 TRGV2A0A075B6R0 118 aa20.75■□□□□ 0.91
USP42-202ENST00000404008 DEFB131BA0A096LNP1 70 aa20.75■□□□□ 0.91
USP42-202ENST00000404008 RPS20P60866 119 aaKnown RBP20.75■□□□□ 0.91
USP42-202ENST00000404008 PTH2Q96A98 100 aa20.75■□□□□ 0.91
USP42-202ENST00000404008 RPP21Q9H633 154 aaKnown RBP20.75■□□□□ 0.91
USP42-202ENST00000404008 SCRT2Q9NQ03 307 aa20.75■□□□□ 0.91
USP42-202ENST00000404008 NUPR2A6NF83 97 aa20.74■□□□□ 0.91
USP42-202ENST00000404008 MED14OSP0DP75 135 aa20.74■□□□□ 0.91
USP42-202ENST00000404008 ERVFC1-1P60608 527 aa20.74■□□□□ 0.91
USP42-202ENST00000404008 ZNF876PQ49A33 203 aa20.74■□□□□ 0.91
USP42-202ENST00000404008 CEMP1Q6PRD7 247 aaPredicted RBP20.74■□□□□ 0.91
USP42-202ENST00000404008 TENM2Q9NT68 2774 aa20.74■□□□□ 0.91
USP42-202ENST00000404008 ATP5G1P05496 136 aa20.73■□□□□ 0.91
USP42-202ENST00000404008 GZMBP10144 247 aa20.73■□□□□ 0.91
USP42-202ENST00000404008 ADIRFQ15847 76 aa20.73■□□□□ 0.91
USP42-202ENST00000404008 ISOC2Q96AB3 205 aa20.73■□□□□ 0.91
USP42-202ENST00000404008 HTN3P15516 51 aa20.72■□□□□ 0.91
USP42-202ENST00000404008 CASC10Q5T4H9 136 aa20.72■□□□□ 0.91
USP42-202ENST00000404008 XKRY2A2RUG3 117 aa20.72■□□□□ 0.91
USP42-202ENST00000404008 SSBP4Q9BWG4 385 aaPredicted RBP20.72■□□□□ 0.91
USP42-202ENST00000404008 PHLDA3Q9Y5J5 127 aa20.72■□□□□ 0.91
USP42-202ENST00000404008 GATCO43716 136 aaKnown RBP20.71■□□□□ 0.91
USP42-202ENST00000404008 NDUFAF3Q9BU61 184 aa20.71■□□□□ 0.91
USP42-202ENST00000404008 OSTCQ9NRP0 149 aa20.71■□□□□ 0.91
USP42-202ENST00000404008 TMEM218A2RU14 115 aa20.7■□□□□ 0.9
USP42-202ENST00000404008 SNAI2O43623 268 aa20.7■□□□□ 0.9
USP42-202ENST00000404008 OR5AL1P0C617 328 aa20.7■□□□□ 0.9
USP42-202ENST00000404008 IGLC6P0CF74 106 aa20.7■□□□□ 0.9
USP42-202ENST00000404008 PIK3CD-AS1Q5SR53 167 aa20.7■□□□□ 0.9
USP42-202ENST00000404008 SFRP2Q96HF1 295 aa20.69■□□□□ 0.9
USP42-202ENST00000404008 DMRTA1Q5VZB9 504 aa20.68■□□□□ 0.9
USP42-202ENST00000404008 POM121L12Q8N7R1 296 aa20.68■□□□□ 0.9
USP42-202ENST00000404008 NACAE9PAV3 2078 aa20.67■□□□□ 0.9
USP42-202ENST00000404008 CT83Q5H943 113 aa20.67■□□□□ 0.9
USP42-202ENST00000404008 C15orf54Q8N8G6 183 aa20.67■□□□□ 0.9
USP42-202ENST00000404008 FER1L6-AS1Q8NA97 138 aa20.67■□□□□ 0.9
USP42-202ENST00000404008 SYT8Q8NBV8 401 aa20.67■□□□□ 0.9
USP42-202ENST00000404008 KLK5Q9Y337 293 aaPredicted RBP20.67■□□□□ 0.9
USP42-202ENST00000404008 TRAV4A0A0B4J268 109 aa20.66■□□□□ 0.9
USP42-202ENST00000404008 F5H768 121 aa20.66■□□□□ 0.9
USP42-202ENST00000404008 ADCYAP1P18509 176 aa20.66■□□□□ 0.9
USP42-202ENST00000404008 HOXA5P20719 270 aa20.66■□□□□ 0.9
USP42-202ENST00000404008 ZFP82Q8N141 532 aa20.66■□□□□ 0.9
USP42-202ENST00000404008 OR10AG1Q8NH19 301 aa20.66■□□□□ 0.9
USP42-202ENST00000404008 M0R381 172 aa20.65■□□□□ 0.9
USP42-202ENST00000404008 NXPH4O95158 308 aa20.65■□□□□ 0.9
USP42-202ENST00000404008 IGHV3-53P01767 116 aa20.65■□□□□ 0.9
USP42-202ENST00000404008 TPPP3Q9BW30 176 aa20.65■□□□□ 0.9
USP42-202ENST00000404008 A0A1W2PPQ1 181 aa20.64■□□□□ 0.89
USP42-202ENST00000404008 OR4C5Q8NGB2 326 aa20.64■□□□□ 0.89
USP42-202ENST00000404008 ZNF479Q96JC4 524 aa20.64■□□□□ 0.89
USP42-202ENST00000404008 V9GYV3 84 aa20.64■□□□□ 0.89
USP42-202ENST00000404008 A8MWL6 223 aa20.63■□□□□ 0.89
USP42-202ENST00000404008 F8W036 122 aa20.63■□□□□ 0.89
USP42-202ENST00000404008 RS1O15537 224 aa20.63■□□□□ 0.89
USP42-202ENST00000404008 PNRC1Q12796 327 aaPredicted RBP20.63■□□□□ 0.89
USP42-202ENST00000404008 CFAP126Q5VTH2 177 aa20.63■□□□□ 0.89
USP42-202ENST00000404008 MUC21A0A0G2JKD1 596 aa20.62■□□□□ 0.89
USP42-202ENST00000404008 MUC21A0A140T8X8 626 aa20.62■□□□□ 0.89
USP42-202ENST00000404008 IGLL5B9A064 214 aa20.62■□□□□ 0.89
USP42-202ENST00000404008 OR10G8Q8NGN5 311 aa20.62■□□□□ 0.89
USP42-202ENST00000404008 GTSF1Q8WW33 167 aa20.62■□□□□ 0.89
USP42-202ENST00000404008 PLECQ15149 4684 aaKnown RBP20.62■□□□□ 0.89
USP42-202ENST00000404008 A8MWV9 139 aa20.61■□□□□ 0.89
USP42-202ENST00000404008 F2Z2F3 143 aa20.61■□□□□ 0.89
USP42-202ENST00000404008 CTRLP40313 264 aa20.61■□□□□ 0.89
USP42-202ENST00000404008 LYZL1Q6UWQ5 148 aa20.61■□□□□ 0.89
USP42-202ENST00000404008 FAM210BQ96KR6 192 aa20.61■□□□□ 0.89
USP42-202ENST00000404008 SEC11CQ9BY50 192 aa20.61■□□□□ 0.89
USP42-202ENST00000404008 FHL2Q14192 279 aa20.6■□□□□ 0.89
USP42-202ENST00000404008 SPANXN1Q5VSR9 72 aa20.6■□□□□ 0.89
USP42-202ENST00000404008 TMEM88Q6PEY1 159 aa20.6■□□□□ 0.89
USP42-202ENST00000404008 JPT2Q9H910 190 aa20.6■□□□□ 0.89
USP42-202ENST00000404008 IGHV4-4A0A075B6R2 117 aa20.59■□□□□ 0.89
USP42-202ENST00000404008 TSKUQ8WUA8 353 aa20.59■□□□□ 0.89
USP42-202ENST00000404008 GFRA4Q9GZZ7 299 aa20.58■□□□□ 0.88
USP42-202ENST00000404008 TRGV4A0A0C4DH28 118 aa20.57■□□□□ 0.88
USP42-202ENST00000404008 CIDEAO60543 219 aa20.57■□□□□ 0.88
USP42-202ENST00000404008 FOXA3P55318 350 aaPredicted RBP20.57■□□□□ 0.88
USP42-202ENST00000404008 SSTP61278 116 aa20.57■□□□□ 0.88
USP42-202ENST00000404008 CACNG7P62955 275 aa20.57■□□□□ 0.88
USP42-202ENST00000404008 CNFNQ9BYD5 112 aa20.57■□□□□ 0.88
USP42-202ENST00000404008 TRAV26-1A0A087WT03 109 aa20.56■□□□□ 0.88
USP42-202ENST00000404008 FAM231BA6NCW3 169 aa20.56■□□□□ 0.88
USP42-202ENST00000404008 C10orf91Q5T1B1 145 aa20.56■□□□□ 0.88
USP42-202ENST00000404008 SAMD10Q9BYL1 202 aa20.56■□□□□ 0.88
USP42-202ENST00000404008 TCTAP57738 103 aa20.55■□□□□ 0.88
USP42-202ENST00000404008 UFSP1Q6NVU6 142 aa20.55■□□□□ 0.88
USP42-202ENST00000404008 WDR73Q6P4I2 378 aa20.55■□□□□ 0.88
USP42-202ENST00000404008 ZFP2Q6ZN57 461 aa20.55■□□□□ 0.88
USP42-202ENST00000404008 HHLA3Q9XRX5 114 aa20.55■□□□□ 0.88
USP42-202ENST00000404008 IGHV3-73A0A0B4J1V6 119 aa20.54■□□□□ 0.88
USP42-202ENST00000404008 SLAQ13239 276 aa20.54■□□□□ 0.88
USP42-202ENST00000404008 LYSTQ99698 3801 aa20.54■□□□□ 0.88
USP42-202ENST00000404008 PRO0255Q9UI72 69 aa20.54■□□□□ 0.88
USP42-202ENST00000404008 APLNQ9ULZ1 77 aa20.54■□□□□ 0.88
USP42-202ENST00000404008 HIGD1CA8MV81 97 aa20.53■□□□□ 0.88
USP42-202ENST00000404008 CRYBA4P53673 196 aa20.53■□□□□ 0.88
USP42-202ENST00000404008 RNF212Q495C1 297 aa20.53■□□□□ 0.88
USP42-202ENST00000404008 VSIG2Q96IQ7 327 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms