RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 TNFRSF18Q9Y5U5 241 aa9.07□□□□□ -0.96
SDF4-203ENST00000403997 DYNC1H1Q14204 4646 aaKnown RBP9.07□□□□□ -0.96
SDF4-203ENST00000403997 KANTRA0A1W2PQU2 76 aa9.06□□□□□ -0.96
SDF4-203ENST00000403997 SEC11BP0C7V7 166 aa9.06□□□□□ -0.96
SDF4-203ENST00000403997 EVI2AP22794 236 aa9.06□□□□□ -0.96
SDF4-203ENST00000403997 ASIPP42127 132 aa9.06□□□□□ -0.96
SDF4-203ENST00000403997 UBE2G1P62253 170 aa9.06□□□□□ -0.96
SDF4-203ENST00000403997 Q6ZRN7 208 aaPredicted RBP9.06□□□□□ -0.96
SDF4-203ENST00000403997 FAM213BQ8TBF2 198 aa9.06□□□□□ -0.96
SDF4-203ENST00000403997 SFT2D1Q8WV19 159 aa9.06□□□□□ -0.96
SDF4-203ENST00000403997 FMC1Q96HJ9 113 aa9.06□□□□□ -0.96
SDF4-203ENST00000403997 ZNF471Q9BX82 626 aaPredicted RBP9.06□□□□□ -0.96
SDF4-203ENST00000403997 ZFP30Q9Y2G7 519 aa9.06□□□□□ -0.96
SDF4-203ENST00000403997 DNAH11Q96DT5 4516 aa9.06□□□□□ -0.96
SDF4-203ENST00000403997 TRBV6-4A0A1B0GX49 114 aa9.05□□□□□ -0.96
SDF4-203ENST00000403997 B4DEV8 164 aa9.05□□□□□ -0.96
SDF4-203ENST00000403997 UMAD1C9J7I0 102 aa9.05□□□□□ -0.96
SDF4-203ENST00000403997 PAGE4O60829 102 aa9.05□□□□□ -0.96
SDF4-203ENST00000403997 CRIP1P50238 77 aa9.05□□□□□ -0.96
SDF4-203ENST00000403997 RHOHQ15669 191 aa9.05□□□□□ -0.96
SDF4-203ENST00000403997 LGALSLQ3ZCW2 172 aaPredicted RBP9.05□□□□□ -0.96
SDF4-203ENST00000403997 NFE4Q86UQ8 179 aa9.05□□□□□ -0.96
SDF4-203ENST00000403997 ZC2HC1AQ96GY0 325 aa9.05□□□□□ -0.96
SDF4-203ENST00000403997 A0A1B0GV50 99 aa9.04□□□□□ -0.96
SDF4-203ENST00000403997 BCL2L11O43521 198 aa9.04□□□□□ -0.96
SDF4-203ENST00000403997 SH2D1AO60880 128 aa9.04□□□□□ -0.96
SDF4-203ENST00000403997 DNAH10OSP0CZ25 163 aa9.04□□□□□ -0.96
SDF4-203ENST00000403997 MGST1P10620 155 aaKnown RBP9.04□□□□□ -0.96
SDF4-203ENST00000403997 TIRAPP58753 221 aa9.04□□□□□ -0.96
SDF4-203ENST00000403997 FAM162BQ5T6X4 162 aa9.04□□□□□ -0.96
SDF4-203ENST00000403997 MBD3L1Q8WWY6 194 aa9.04□□□□□ -0.96
SDF4-203ENST00000403997 TCEAL7Q9BRU2 100 aa9.04□□□□□ -0.96
SDF4-203ENST00000403997 MSRB1Q9NZV6 116 aa9.04□□□□□ -0.96
SDF4-203ENST00000403997 A8MWV9 139 aa9.03□□□□□ -0.96
SDF4-203ENST00000403997 KRBOX1C9JBD0 128 aa9.03□□□□□ -0.96
SDF4-203ENST00000403997 H3BVH4 76 aa9.03□□□□□ -0.96
SDF4-203ENST00000403997 K7EP13 123 aa9.03□□□□□ -0.96
SDF4-203ENST00000403997 M0R036 132 aa9.03□□□□□ -0.96
SDF4-203ENST00000403997 AKR1C3P42330 323 aa9.03□□□□□ -0.96
SDF4-203ENST00000403997 KRTAP10-2P60368 255 aa9.03□□□□□ -0.96
SDF4-203ENST00000403997 EIF5AP63241 154 aaKnown RBP9.03□□□□□ -0.96
SDF4-203ENST00000403997 COX8CQ7Z4L0 72 aa9.03□□□□□ -0.96
SDF4-203ENST00000403997 PARLQ9H300 379 aa9.03□□□□□ -0.96
SDF4-203ENST00000403997 IL36BQ9NZH7 164 aa9.03□□□□□ -0.96
SDF4-203ENST00000403997 TRAV8-6A0A0B4J262 113 aa9.02□□□□□ -0.97
SDF4-203ENST00000403997 IGHV3-38A0A0C4DH36 116 aa9.02□□□□□ -0.97
SDF4-203ENST00000403997 TRBV6-1A0A0K0K1D8 114 aa9.02□□□□□ -0.97
SDF4-203ENST00000403997 GRIFINA4D1Z8 144 aa9.02□□□□□ -0.97
SDF4-203ENST00000403997 EREGO14944 169 aa9.02□□□□□ -0.97
SDF4-203ENST00000403997 PFDN1O60925 122 aa9.02□□□□□ -0.97
SDF4-203ENST00000403997 LTAP01374 205 aa9.02□□□□□ -0.97
SDF4-203ENST00000403997 CRYGDP07320 174 aa9.02□□□□□ -0.97
SDF4-203ENST00000403997 ARMS2P0C7Q2 107 aa9.02□□□□□ -0.97
SDF4-203ENST00000403997 PIK3CD-AS1Q5SR53 167 aa9.02□□□□□ -0.97
SDF4-203ENST00000403997 DMRTA1Q5VZB9 504 aa9.02□□□□□ -0.97
SDF4-203ENST00000403997 Q6ZSN1 163 aa9.02□□□□□ -0.97
SDF4-203ENST00000403997 TMUB2Q71RG4 321 aa9.02□□□□□ -0.97
SDF4-203ENST00000403997 ATP6V0E2Q8NHE4 81 aa9.02□□□□□ -0.97
SDF4-203ENST00000403997 JPT2Q9H910 190 aa9.02□□□□□ -0.97
SDF4-203ENST00000403997 H2AFB1P0C5Y9 115 aa9.01□□□□□ -0.97
SDF4-203ENST00000403997 ERVFC1-1P60608 527 aa9.01□□□□□ -0.97
SDF4-203ENST00000403997 ZNF674Q2M3X9 581 aa9.01□□□□□ -0.97
SDF4-203ENST00000403997 OR10J3Q5JRS4 329 aa9.01□□□□□ -0.97
SDF4-203ENST00000403997 DNLZQ5SXM8 178 aa9.01□□□□□ -0.97
SDF4-203ENST00000403997 ZFP2Q6ZN57 461 aa9.01□□□□□ -0.97
SDF4-203ENST00000403997 C10orf126Q8N4M7 172 aa9.01□□□□□ -0.97
SDF4-203ENST00000403997 SYT8Q8NBV8 401 aa9.01□□□□□ -0.97
SDF4-203ENST00000403997 TMSB15BA0A087X1C1 80 aa9□□□□□ -0.97
SDF4-203ENST00000403997 SCO2A0A1W2PP80 73 aa9□□□□□ -0.97
SDF4-203ENST00000403997 CDK2AP2O75956 126 aa9□□□□□ -0.97
SDF4-203ENST00000403997 S100A9P06702 114 aaKnown RBP9□□□□□ -0.97
SDF4-203ENST00000403997 TPT1P13693 172 aaKnown RBP9□□□□□ -0.97
SDF4-203ENST00000403997 LELP1Q5T871 98 aa9□□□□□ -0.97
SDF4-203ENST00000403997 SAMD10Q9BYL1 202 aa9□□□□□ -0.97
SDF4-203ENST00000403997 GTSF1LQ9H1H1 148 aa9□□□□□ -0.97
SDF4-203ENST00000403997 PGPEP1Q9NXJ5 209 aa9□□□□□ -0.97
SDF4-203ENST00000403997 PHLDA3Q9Y5J5 127 aa9□□□□□ -0.97
SDF4-203ENST00000403997 GAGE12JA6NER3 117 aa8.99□□□□□ -0.97
SDF4-203ENST00000403997 GAGE1Q13065 139 aa8.99□□□□□ -0.97
SDF4-203ENST00000403997 GAGE4Q13068 117 aa8.99□□□□□ -0.97
SDF4-203ENST00000403997 GAGE5Q13069 117 aa8.99□□□□□ -0.97
SDF4-203ENST00000403997 LINC01559Q495D7 138 aa8.99□□□□□ -0.97
SDF4-203ENST00000403997 GAGE13Q4V321 117 aa8.99□□□□□ -0.97
SDF4-203ENST00000403997 LINC01556Q5JQF7 62 aa8.99□□□□□ -0.97
SDF4-203ENST00000403997 BOLA1Q9Y3E2 137 aa8.99□□□□□ -0.97
SDF4-203ENST00000403997 A0A087WTM6 91 aa8.98□□□□□ -0.97
SDF4-203ENST00000403997 IGHV3-30P01768 117 aa8.98□□□□□ -0.97
SDF4-203ENST00000403997 IGHV3-33P01772 117 aa8.98□□□□□ -0.97
SDF4-203ENST00000403997 IGHV3-30-3P0DP02 117 aa8.98□□□□□ -0.97
SDF4-203ENST00000403997 IGHV3-30-5P0DP03 117 aa8.98□□□□□ -0.97
SDF4-203ENST00000403997 FUSP35637 526 aaKnown RBP eCLIP8.98□□□□□ -0.974e-7■■■■□ 20.8
SDF4-203ENST00000403997 UFSP1Q6NVU6 142 aa8.98□□□□□ -0.97
SDF4-203ENST00000403997 BAGE2Q86Y30 109 aa8.98□□□□□ -0.97
SDF4-203ENST00000403997 C14orf178Q8N769 122 aaPredicted RBP8.98□□□□□ -0.97
SDF4-203ENST00000403997 A0A087WWL8 130 aa8.97□□□□□ -0.97
SDF4-203ENST00000403997 M0R381 172 aa8.97□□□□□ -0.97
SDF4-203ENST00000403997 RHODO00212 210 aa8.97□□□□□ -0.97
SDF4-203ENST00000403997 FAM74A4Q5TZK3 123 aa8.97□□□□□ -0.97
SDF4-203ENST00000403997 SCRT2Q9NQ03 307 aa8.97□□□□□ -0.97
SDF4-203ENST00000403997 GNG13Q9P2W3 67 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms