RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 MXRA5Q9NR99 2828 aa12.69□□□□□ -0.38
DNMT3A-205ENST00000402667 TCTAP57738 103 aa12.69□□□□□ -0.38
DNMT3A-205ENST00000402667 ODF1Q14990 250 aa12.69□□□□□ -0.38
DNMT3A-205ENST00000402667 C12orf54Q6X4T0 127 aa12.69□□□□□ -0.38
DNMT3A-205ENST00000402667 PRRC2AP48634 2157 aaKnown RBP12.69□□□□□ -0.38
DNMT3A-205ENST00000402667 PSMG4Q5JS54 123 aa12.68□□□□□ -0.38
DNMT3A-205ENST00000402667 LRRC75A-AS1Q8N1F1 130 aa12.68□□□□□ -0.38
DNMT3A-205ENST00000402667 UBE2E2Q96LR5 201 aa12.68□□□□□ -0.38
DNMT3A-205ENST00000402667 RASL10AQ92737 203 aa12.68□□□□□ -0.38
DNMT3A-205ENST00000402667 SMIM2Q9BVW6 85 aa12.68□□□□□ -0.38
DNMT3A-205ENST00000402667 ZMAT4Q9H898 229 aa12.68□□□□□ -0.38
DNMT3A-205ENST00000402667 CREBBPQ92793 2442 aa12.67□□□□□ -0.38
DNMT3A-205ENST00000402667 K7EQG2 157 aa12.67□□□□□ -0.38
DNMT3A-205ENST00000402667 LGALS9O00182 355 aa12.67□□□□□ -0.38
DNMT3A-205ENST00000402667 FAM159AQ6UWV7 190 aa12.67□□□□□ -0.38
DNMT3A-205ENST00000402667 DUX5Q96PT3 197 aa12.67□□□□□ -0.38
DNMT3A-205ENST00000402667 MUC4Q99102 2169 aa12.67□□□□□ -0.38
DNMT3A-205ENST00000402667 ATP5LO75964 103 aa12.67□□□□□ -0.38
DNMT3A-205ENST00000402667 SNRPD3P62318 126 aaKnown RBP12.67□□□□□ -0.38
DNMT3A-205ENST00000402667 BOD1L2Q8IYS8 172 aa12.67□□□□□ -0.38
DNMT3A-205ENST00000402667 Q96MF0 132 aa12.67□□□□□ -0.38
DNMT3A-205ENST00000402667 FOXC2Q99958 501 aa12.67□□□□□ -0.38
DNMT3A-205ENST00000402667 TRAV12-3A0A0B4J271 114 aa12.66□□□□□ -0.38
DNMT3A-205ENST00000402667 CCL25O15444 150 aa12.66□□□□□ -0.38
DNMT3A-205ENST00000402667 HOXD3P31249 432 aaPredicted RBP12.66□□□□□ -0.38
DNMT3A-205ENST00000402667 RNF152Q8N8N0 203 aa12.66□□□□□ -0.38
DNMT3A-205ENST00000402667 RPL39LQ96EH5 51 aaKnown RBP12.66□□□□□ -0.38
DNMT3A-205ENST00000402667 A0A0J9YX75 114 aa12.66□□□□□ -0.38
DNMT3A-205ENST00000402667 NXPH4O95158 308 aa12.66□□□□□ -0.38
DNMT3A-205ENST00000402667 MGPP08493 103 aa12.66□□□□□ -0.38
DNMT3A-205ENST00000402667 PTTG1IPP53801 180 aa12.66□□□□□ -0.38
DNMT3A-205ENST00000402667 SUMO2P61956 95 aaKnown RBP12.66□□□□□ -0.38
DNMT3A-205ENST00000402667 AP1S3Q96PC3 154 aa12.66□□□□□ -0.38
DNMT3A-205ENST00000402667 C20orf78Q9BR46 151 aa12.66□□□□□ -0.38
DNMT3A-205ENST00000402667 TEX15Q9BXT5 2789 aa12.66□□□□□ -0.38
DNMT3A-205ENST00000402667 HHLA3Q9XRX5 114 aa12.65□□□□□ -0.38
DNMT3A-205ENST00000402667 C7orf71A4D174 169 aa12.65□□□□□ -0.39
DNMT3A-205ENST00000402667 ODF3Q96PU9 254 aa12.65□□□□□ -0.39
DNMT3A-205ENST00000402667 IGKV3-20P01619 116 aa12.64□□□□□ -0.39
DNMT3A-205ENST00000402667 IGKCP01834 107 aa12.63□□□□□ -0.39
DNMT3A-205ENST00000402667 CD7P09564 240 aa12.63□□□□□ -0.39
DNMT3A-205ENST00000402667 NMUP48645 174 aa12.63□□□□□ -0.39
DNMT3A-205ENST00000402667 KRTAP1-3Q8IUG1 177 aa12.63□□□□□ -0.39
DNMT3A-205ENST00000402667 PCP2Q8IVA1 136 aa12.63□□□□□ -0.39
DNMT3A-205ENST00000402667 KIF25-AS1Q9Y6Z4 181 aa12.63□□□□□ -0.39
DNMT3A-205ENST00000402667 SORL1Q92673 2214 aa12.63□□□□□ -0.39
DNMT3A-205ENST00000402667 UBE2V1Q13404 147 aa12.63□□□□□ -0.39
DNMT3A-205ENST00000402667 POM121L12Q8N7R1 296 aa12.63□□□□□ -0.39
DNMT3A-205ENST00000402667 AGRNO00468 2067 aa12.63□□□□□ -0.39
DNMT3A-205ENST00000402667 TRAV12-2A0A075B6T6 113 aa12.62□□□□□ -0.39
DNMT3A-205ENST00000402667 LINC00315P59091 139 aa12.62□□□□□ -0.39
DNMT3A-205ENST00000402667 ERASQ7Z444 233 aa12.62□□□□□ -0.39
DNMT3A-205ENST00000402667 TAX1BP3O14907 124 aa12.62□□□□□ -0.39
DNMT3A-205ENST00000402667 DPM2O94777 84 aa12.62□□□□□ -0.39
DNMT3A-205ENST00000402667 ORMDL2Q53FV1 153 aa12.62□□□□□ -0.39
DNMT3A-205ENST00000402667 TMEM97Q5BJF2 176 aa12.62□□□□□ -0.39
DNMT3A-205ENST00000402667 C18orf65Q6ZTR6 163 aa12.62□□□□□ -0.39
DNMT3A-205ENST00000402667 Q8N2B8 174 aa12.62□□□□□ -0.39
DNMT3A-205ENST00000402667 ADAMTSL5Q6ZMM2 481 aa12.61□□□□□ -0.39
DNMT3A-205ENST00000402667 OR9G4Q8NGQ1 327 aa12.61□□□□□ -0.39
DNMT3A-205ENST00000402667 JPT2Q9H910 190 aa12.61□□□□□ -0.39
DNMT3A-205ENST00000402667 TCTEX1D4Q5JR98 221 aa12.61□□□□□ -0.39
DNMT3A-205ENST00000402667 MRPL35Q9NZE8 188 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-205ENST00000402667 IGKV2D-26A0A0A0MRZ7 120 aa12.6□□□□□ -0.39
DNMT3A-205ENST00000402667 SIVA1O15304 175 aa12.6□□□□□ -0.39
DNMT3A-205ENST00000402667 PPP1R17O96001 155 aa12.6□□□□□ -0.39
DNMT3A-205ENST00000402667 DEFB136Q30KP8 78 aa12.6□□□□□ -0.39
DNMT3A-205ENST00000402667 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.6□□□□□ -0.39
DNMT3A-205ENST00000402667 K7EMI3 77 aa12.6□□□□□ -0.39
DNMT3A-205ENST00000402667 CDKN1BP46527 198 aa12.6□□□□□ -0.39
DNMT3A-205ENST00000402667 SLURP1P55000 103 aa12.6□□□□□ -0.39
DNMT3A-205ENST00000402667 SPINK13Q1W4C9 94 aa12.6□□□□□ -0.39
DNMT3A-205ENST00000402667 TMEM160Q9NX00 188 aa12.6□□□□□ -0.39
DNMT3A-205ENST00000402667 APCP25054 2843 aa12.59□□□□□ -0.39
DNMT3A-205ENST00000402667 A0A087WX48 190 aa12.59□□□□□ -0.39
DNMT3A-205ENST00000402667 IGHV3-16A0A0C4DH30 117 aa12.59□□□□□ -0.39
DNMT3A-205ENST00000402667 TOMM6Q96B49 74 aa12.59□□□□□ -0.39
DNMT3A-205ENST00000402667 DUSP14O95147 198 aaKnown RBP12.59□□□□□ -0.39
DNMT3A-205ENST00000402667 ZC2HC1BQ5TFG8 222 aa12.59□□□□□ -0.39
DNMT3A-205ENST00000402667 CSTL1Q9H114 145 aa12.59□□□□□ -0.39
DNMT3A-205ENST00000402667 MDFICQ9P1T7 246 aa12.59□□□□□ -0.39
DNMT3A-205ENST00000402667 VAMP3Q15836 100 aa12.58□□□□□ -0.4
DNMT3A-205ENST00000402667 GTSCR1Q86UQ5 136 aa12.58□□□□□ -0.4
DNMT3A-205ENST00000402667 C9orf85Q96MD7 179 aa12.58□□□□□ -0.4
DNMT3A-205ENST00000402667 SCGB3A1Q96QR1 104 aa12.58□□□□□ -0.4
DNMT3A-205ENST00000402667 A0A087WWL8 130 aa12.57□□□□□ -0.4
DNMT3A-205ENST00000402667 FOXI2Q6ZQN5 318 aa12.57□□□□□ -0.4
DNMT3A-205ENST00000402667 Q8N1Y9 231 aa12.57□□□□□ -0.4
DNMT3A-205ENST00000402667 ZNF469Q96JG9 3925 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-205ENST00000402667 SEC11AP67812 179 aa12.57□□□□□ -0.4
DNMT3A-205ENST00000402667 SUMO4Q6EEV6 95 aa12.57□□□□□ -0.4
DNMT3A-205ENST00000402667 TLN2Q9Y4G6 2542 aa12.57□□□□□ -0.4
DNMT3A-205ENST00000402667 IGHV1OR15-1A0A075B7D0 117 aa12.56□□□□□ -0.4
DNMT3A-205ENST00000402667 CBY3A6NI87 242 aa12.56□□□□□ -0.4
DNMT3A-205ENST00000402667 HSD52Q0P140 79 aa12.56□□□□□ -0.4
DNMT3A-205ENST00000402667 AMTNQ6UX39 209 aa12.56□□□□□ -0.4
DNMT3A-205ENST00000402667 C2orf66Q6UXQ4 117 aa12.56□□□□□ -0.4
DNMT3A-205ENST00000402667 TTTY13Q9BZ97 58 aa12.56□□□□□ -0.4
DNMT3A-205ENST00000402667 MYO9AB2RTY4 2548 aa12.56□□□□□ -0.4
DNMT3A-205ENST00000402667 TRAV12-1A0A0B4J245 112 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms