RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 CPAMD8Q8IZJ3 1885 aa13.7□□□□□ -0.22
SNED1-204ENST00000401884 C2orf70A6NJV1 201 aa13.7□□□□□ -0.22
SNED1-204ENST00000401884 TMEM141Q96I45 108 aa13.7□□□□□ -0.22
SNED1-204ENST00000401884 SIVA1O15304 175 aa13.69□□□□□ -0.22
SNED1-204ENST00000401884 TRAV13-1A0A0B4J241 112 aa13.69□□□□□ -0.22
SNED1-204ENST00000401884 K7EP13 123 aa13.69□□□□□ -0.22
SNED1-204ENST00000401884 DEFB112Q30KQ8 113 aa13.69□□□□□ -0.22
SNED1-204ENST00000401884 C5orf56Q8N8D9 126 aa13.69□□□□□ -0.22
SNED1-204ENST00000401884 Q5PR19 223 aa13.69□□□□□ -0.22
SNED1-204ENST00000401884 RPL35AP18077 110 aaKnown RBP13.69□□□□□ -0.22
SNED1-204ENST00000401884 ETDBQ3ZM63 59 aa13.69□□□□□ -0.22
SNED1-204ENST00000401884 IGHV4-30-2A0A087WSY4 118 aa13.68□□□□□ -0.22
SNED1-204ENST00000401884 AJUBAQ96IF1 538 aa13.68□□□□□ -0.22
SNED1-204ENST00000401884 GTSF1LQ9H1H1 148 aa13.68□□□□□ -0.22
SNED1-204ENST00000401884 PRSS29PA6NIE9 313 aa13.68□□□□□ -0.22
SNED1-204ENST00000401884 RHODO00212 210 aa13.68□□□□□ -0.22
SNED1-204ENST00000401884 TRBV6-1A0A0K0K1D8 114 aa13.68□□□□□ -0.22
SNED1-204ENST00000401884 I3L3M4 83 aa13.68□□□□□ -0.22
SNED1-204ENST00000401884 CMC4P56277 68 aaPredicted RBP13.68□□□□□ -0.22
SNED1-204ENST00000401884 ZNF493Q6ZR52 646 aa13.68□□□□□ -0.22
SNED1-204ENST00000401884 TP53TG3Q9ULZ0 132 aa13.68□□□□□ -0.22
SNED1-204ENST00000401884 ELANEP08246 267 aa13.67□□□□□ -0.22
SNED1-204ENST00000401884 SIRPDQ9H106 197 aa13.67□□□□□ -0.22
SNED1-204ENST00000401884 IGHV3-16A0A0C4DH30 117 aa13.67□□□□□ -0.22
SNED1-204ENST00000401884 CCL25O15444 150 aa13.67□□□□□ -0.22
SNED1-204ENST00000401884 C16orf54Q6UWD8 224 aa13.67□□□□□ -0.22
SNED1-204ENST00000401884 ZNF48Q96MX3 618 aaPredicted RBP13.67□□□□□ -0.22
SNED1-204ENST00000401884 A0A1W2PPM0 123 aa13.67□□□□□ -0.22
SNED1-204ENST00000401884 K7ERJ3 54 aa13.67□□□□□ -0.22
SNED1-204ENST00000401884 LINC01619G3V211 115 aa13.66□□□□□ -0.22
SNED1-204ENST00000401884 CTRLP40313 264 aa13.66□□□□□ -0.22
SNED1-204ENST00000401884 K7EP34 96 aa13.66□□□□□ -0.22
SNED1-204ENST00000401884 ATP6V0BQ99437 205 aa13.65□□□□□ -0.22
SNED1-204ENST00000401884 TRBV25-1A0A075B6N4 114 aa13.65□□□□□ -0.22
SNED1-204ENST00000401884 J3QLI3 93 aa13.65□□□□□ -0.22
SNED1-204ENST00000401884 SCGB1A1P11684 91 aa13.65□□□□□ -0.22
SNED1-204ENST00000401884 ABCA12Q86UK0 2595 aa13.65□□□□□ -0.22
SNED1-204ENST00000401884 CEND1Q8N111 149 aa13.65□□□□□ -0.22
SNED1-204ENST00000401884 RPL39LQ96EH5 51 aaKnown RBP13.65□□□□□ -0.22
SNED1-204ENST00000401884 SCRT2Q9NQ03 307 aa13.65□□□□□ -0.22
SNED1-204ENST00000401884 CRYGBP07316 175 aa13.65□□□□□ -0.22
SNED1-204ENST00000401884 LINC00158P58513 81 aa13.65□□□□□ -0.22
SNED1-204ENST00000401884 MKI67P46013 3256 aaKnown RBP13.65□□□□□ -0.23
SNED1-204ENST00000401884 DEFB1P60022 68 aa13.64□□□□□ -0.23
SNED1-204ENST00000401884 TSPAN13O95857 204 aa13.64□□□□□ -0.23
SNED1-204ENST00000401884 RASL10AQ92737 203 aa13.64□□□□□ -0.23
SNED1-204ENST00000401884 ZNF625Q96I27 306 aaPredicted RBP13.64□□□□□ -0.23
SNED1-204ENST00000401884 TTTY13Q9BZ97 58 aa13.64□□□□□ -0.23
SNED1-204ENST00000401884 PRIMA1Q86XR5 153 aa13.64□□□□□ -0.23
SNED1-204ENST00000401884 EXPH5Q8NEV8 1989 aa13.64□□□□□ -0.23
SNED1-204ENST00000401884 CFAP161Q6P656 301 aa13.63□□□□□ -0.23
SNED1-204ENST00000401884 Q96MF0 132 aa13.63□□□□□ -0.23
SNED1-204ENST00000401884 ZNF80P51504 273 aaPredicted RBP13.63□□□□□ -0.23
SNED1-204ENST00000401884 C10orf105Q8TEF2 133 aa13.63□□□□□ -0.23
SNED1-204ENST00000401884 C1QTNF4Q9BXJ3 329 aa13.63□□□□□ -0.23
SNED1-204ENST00000401884 TAL2Q16559 108 aa13.63□□□□□ -0.23
SNED1-204ENST00000401884 AMTNQ6UX39 209 aa13.63□□□□□ -0.23
SNED1-204ENST00000401884 ODF3BA8MYP8 253 aa13.62□□□□□ -0.23
SNED1-204ENST00000401884 C9JAW5 83 aa13.62□□□□□ -0.23
SNED1-204ENST00000401884 HOXD3P31249 432 aaPredicted RBP13.62□□□□□ -0.23
SNED1-204ENST00000401884 C9orf47Q6ZRZ4 202 aa13.62□□□□□ -0.23
SNED1-204ENST00000401884 K7EMI3 77 aa13.62□□□□□ -0.23
SNED1-204ENST00000401884 LOXL1Q08397 574 aaPredicted RBP13.62□□□□□ -0.23
SNED1-204ENST00000401884 COL5A1P20908 1838 aaPredicted RBP13.62□□□□□ -0.23
SNED1-204ENST00000401884 IGHV3-38A0A0C4DH36 116 aa13.62□□□□□ -0.23
SNED1-204ENST00000401884 LINC01548A6NM66 108 aa13.62□□□□□ -0.23
SNED1-204ENST00000401884 H3BMG7 143 aa13.62□□□□□ -0.23
SNED1-204ENST00000401884 J3QQQ9 107 aa13.61□□□□□ -0.23
SNED1-204ENST00000401884 LMO4P61968 165 aa13.61□□□□□ -0.23
SNED1-204ENST00000401884 RBMY1BA6NDE4 496 aaKnown RBP13.61□□□□□ -0.23
SNED1-204ENST00000401884 RBMY1EA6NEQ0 496 aaKnown RBP13.61□□□□□ -0.23
SNED1-204ENST00000401884 RBMY1DP0C7P1 496 aaKnown RBP13.61□□□□□ -0.23
SNED1-204ENST00000401884 RBMY1A1P0DJD3 496 aaKnown RBP13.61□□□□□ -0.23
SNED1-204ENST00000401884 RBMY1CP0DJD4 496 aa13.61□□□□□ -0.23
SNED1-204ENST00000401884 ATXN8Q156A1 80 aa13.61□□□□□ -0.23
SNED1-204ENST00000401884 VPREB3Q9UKI3 123 aa13.61□□□□□ -0.23
SNED1-204ENST00000401884 MYCNOSP40205 109 aa13.6□□□□□ -0.23
SNED1-204ENST00000401884 C12orf74Q32Q52 190 aa13.6□□□□□ -0.23
SNED1-204ENST00000401884 UNQ9165/PRO28630Q6UXU0 137 aa13.6□□□□□ -0.23
SNED1-204ENST00000401884 C10orf126Q8N4M7 172 aa13.6□□□□□ -0.23
SNED1-204ENST00000401884 MALP21145 153 aa13.6□□□□□ -0.23
SNED1-204ENST00000401884 C2orf82Q6UX34 121 aa13.6□□□□□ -0.23
SNED1-204ENST00000401884 ZNRF2Q8NHG8 242 aa13.6□□□□□ -0.23
SNED1-204ENST00000401884 ZFYVE26Q68DK2 2539 aa13.59□□□□□ -0.23
SNED1-204ENST00000401884 GAGE12JA6NER3 117 aa13.59□□□□□ -0.23
SNED1-204ENST00000401884 FSTL3O95633 263 aa13.59□□□□□ -0.23
SNED1-204ENST00000401884 DEFB130BP0DP73 79 aa13.59□□□□□ -0.23
SNED1-204ENST00000401884 DEFB130AP0DP74 79 aa13.59□□□□□ -0.23
SNED1-204ENST00000401884 GAGE4Q13068 117 aa13.59□□□□□ -0.23
SNED1-204ENST00000401884 GAGE5Q13069 117 aa13.59□□□□□ -0.23
SNED1-204ENST00000401884 DEFB136Q30KP8 78 aa13.59□□□□□ -0.23
SNED1-204ENST00000401884 FOXI2Q6ZQN5 318 aa13.59□□□□□ -0.23
SNED1-204ENST00000401884 LY6LH3BQJ8 138 aa13.58□□□□□ -0.23
SNED1-204ENST00000401884 NRGNQ92686 78 aa13.58□□□□□ -0.23
SNED1-204ENST00000401884 IGHG2P01859 326 aa13.58□□□□□ -0.24
SNED1-204ENST00000401884 TRBV12-3P01733 135 aa13.58□□□□□ -0.24
SNED1-204ENST00000401884 CCDC140Q96MF4 163 aa13.58□□□□□ -0.24
SNED1-204ENST00000401884 NDUFA12Q9UI09 145 aa13.58□□□□□ -0.24
SNED1-204ENST00000401884 TRBV20-1A0A075B6N2 111 aa13.58□□□□□ -0.24
SNED1-204ENST00000401884 LGALS1P09382 135 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms