RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 ZNF479Q96JC4 524 aa12.95□□□□□ -0.34
SNRNP70-202ENST00000401730 MOB4Q9Y3A3 225 aa12.95□□□□□ -0.34
SNRNP70-202ENST00000401730 IGSF10Q6WRI0 2623 aa12.94□□□□□ -0.34
SNRNP70-202ENST00000401730 COX8CQ7Z4L0 72 aa12.94□□□□□ -0.34
SNRNP70-202ENST00000401730 HIST1H4GQ99525 98 aa12.94□□□□□ -0.34
SNRNP70-202ENST00000401730 PHLDA3Q9Y5J5 127 aa12.94□□□□□ -0.34
SNRNP70-202ENST00000401730 Q8N8P6 123 aa12.94□□□□□ -0.34
SNRNP70-202ENST00000401730 LAGE3Q14657 143 aa12.93□□□□□ -0.34
SNRNP70-202ENST00000401730 NRACQ8N912 160 aa12.93□□□□□ -0.34
SNRNP70-202ENST00000401730 PSMG3-AS1Q96PY0 264 aa12.93□□□□□ -0.34
SNRNP70-202ENST00000401730 RAB9AP51151 201 aa12.93□□□□□ -0.34
SNRNP70-202ENST00000401730 GPHB5Q86YW7 130 aa12.93□□□□□ -0.34
SNRNP70-202ENST00000401730 OR10J6PQ8NGY7 276 aa12.93□□□□□ -0.34
SNRNP70-202ENST00000401730 ANKRD17O75179 2603 aaKnown RBP12.92□□□□□ -0.34
SNRNP70-202ENST00000401730 DOPEY1Q5JWR5 2465 aa12.92□□□□□ -0.34
SNRNP70-202ENST00000401730 IGHV1-69DA0A0B4J2H0 117 aa12.92□□□□□ -0.34
SNRNP70-202ENST00000401730 DPM2O94777 84 aa12.92□□□□□ -0.34
SNRNP70-202ENST00000401730 IGHV1-69P01742 117 aa12.92□□□□□ -0.34
SNRNP70-202ENST00000401730 NACAE9PAV3 2078 aa12.92□□□□□ -0.34
SNRNP70-202ENST00000401730 CNFNQ9BYD5 112 aa12.92□□□□□ -0.34
SNRNP70-202ENST00000401730 NAV2Q8IVL1 2488 aa12.92□□□□□ -0.34
SNRNP70-202ENST00000401730 HIST2H2BDQ6DRA6 164 aa12.91□□□□□ -0.34
SNRNP70-202ENST00000401730 DPF1Q92782 380 aa12.91□□□□□ -0.34
SNRNP70-202ENST00000401730 DUX5Q96PT3 197 aa12.91□□□□□ -0.34
SNRNP70-202ENST00000401730 ZNF462Q96JM2 2506 aa12.91□□□□□ -0.34
SNRNP70-202ENST00000401730 IGHV4-30-2A0A087WSY4 118 aa12.91□□□□□ -0.34
SNRNP70-202ENST00000401730 A0A087WWL8 130 aa12.91□□□□□ -0.34
SNRNP70-202ENST00000401730 J3QR89 54 aa12.91□□□□□ -0.34
SNRNP70-202ENST00000401730 SIVA1O15304 175 aa12.91□□□□□ -0.34
SNRNP70-202ENST00000401730 ATP5J2P56134 94 aa12.91□□□□□ -0.34
SNRNP70-202ENST00000401730 CD300EQ496F6 205 aaPredicted RBP12.91□□□□□ -0.34
SNRNP70-202ENST00000401730 RHPN1-AS1Q9BWJ2 59 aa12.91□□□□□ -0.34
SNRNP70-202ENST00000401730 IGLV2-18A0A075B6J9 118 aa12.91□□□□□ -0.34
SNRNP70-202ENST00000401730 A0A1B0GWB2 263 aa12.91□□□□□ -0.34
SNRNP70-202ENST00000401730 SPAG8Q99932 426 aaPredicted RBP12.91□□□□□ -0.34
SNRNP70-202ENST00000401730 A0A1B0GV72 72 aa12.9□□□□□ -0.34
SNRNP70-202ENST00000401730 RBAKDNA6NC62 111 aa12.9□□□□□ -0.34
SNRNP70-202ENST00000401730 F5H697 171 aa12.9□□□□□ -0.34
SNRNP70-202ENST00000401730 FAM74A4Q5TZK3 123 aa12.9□□□□□ -0.34
SNRNP70-202ENST00000401730 C9orf47Q6ZRZ4 202 aa12.9□□□□□ -0.34
SNRNP70-202ENST00000401730 CEND1Q8N111 149 aa12.9□□□□□ -0.34
SNRNP70-202ENST00000401730 ZFAND2AQ8N6M9 145 aa12.9□□□□□ -0.34
SNRNP70-202ENST00000401730 MXRA5Q9NR99 2828 aa12.89□□□□□ -0.35
SNRNP70-202ENST00000401730 TGFAP01135 160 aa12.89□□□□□ -0.35
SNRNP70-202ENST00000401730 HTN1P15515 57 aa12.89□□□□□ -0.35
SNRNP70-202ENST00000401730 SCGB3A1Q96QR1 104 aa12.89□□□□□ -0.35
SNRNP70-202ENST00000401730 IGLL5B9A064 214 aa12.89□□□□□ -0.35
SNRNP70-202ENST00000401730 AVPP01185 164 aa12.89□□□□□ -0.35
SNRNP70-202ENST00000401730 CKS1BP61024 79 aa12.89□□□□□ -0.35
SNRNP70-202ENST00000401730 SCGB2A2Q13296 93 aa12.89□□□□□ -0.35
SNRNP70-202ENST00000401730 MUC4Q99102 2169 aa12.89□□□□□ -0.35
SNRNP70-202ENST00000401730 TRAV12-2A0A075B6T6 113 aa12.88□□□□□ -0.35
SNRNP70-202ENST00000401730 ATP6V0BQ99437 205 aa12.88□□□□□ -0.35
SNRNP70-202ENST00000401730 CCL19Q99731 98 aa12.88□□□□□ -0.35
SNRNP70-202ENST00000401730 SPANXB1Q9NS25 103 aaPredicted RBP12.88□□□□□ -0.35
SNRNP70-202ENST00000401730 EPG5Q9HCE0 2579 aa12.88□□□□□ -0.35
SNRNP70-202ENST00000401730 SRSF1Q07955 248 aaKnown RBP eCLIP12.88□□□□□ -0.352e-7■■□□□ 12.5
SNRNP70-202ENST00000401730 TRAV12-3A0A0B4J271 114 aa12.88□□□□□ -0.35
SNRNP70-202ENST00000401730 GAGE13Q4V321 117 aa12.88□□□□□ -0.35
SNRNP70-202ENST00000401730 CYSLTR1Q9Y271 337 aa12.88□□□□□ -0.35
SNRNP70-202ENST00000401730 ASIPP42127 132 aa12.87□□□□□ -0.35
SNRNP70-202ENST00000401730 RASL10AQ92737 203 aa12.87□□□□□ -0.35
SNRNP70-202ENST00000401730 ZNF688P0C7X2 276 aa12.87□□□□□ -0.35
SNRNP70-202ENST00000401730 U3KQE9 123 aa12.87□□□□□ -0.35
SNRNP70-202ENST00000401730 FBN2P35556 2912 aa12.87□□□□□ -0.35
SNRNP70-202ENST00000401730 C9orf139Q6ZV77 190 aa12.86□□□□□ -0.35
SNRNP70-202ENST00000401730 C20orf78Q9BR46 151 aa12.86□□□□□ -0.35
SNRNP70-202ENST00000401730 SMIM2Q9BVW6 85 aa12.86□□□□□ -0.35
SNRNP70-202ENST00000401730 LOC107984156A0A0G2JMH3 177 aa12.86□□□□□ -0.35
SNRNP70-202ENST00000401730 C12orf74Q32Q52 190 aa12.86□□□□□ -0.35
SNRNP70-202ENST00000401730 FOXI2Q6ZQN5 318 aa12.86□□□□□ -0.35
SNRNP70-202ENST00000401730 ARL17AQ8IVW1 177 aa12.86□□□□□ -0.35
SNRNP70-202ENST00000401730 ZNF418Q8TF45 676 aaPredicted RBP12.86□□□□□ -0.35
SNRNP70-202ENST00000401730 TRAV21A0A0B4J279 112 aa12.86□□□□□ -0.35
SNRNP70-202ENST00000401730 ATP5LO75964 103 aa12.86□□□□□ -0.35
SNRNP70-202ENST00000401730 SUMO2P61956 95 aaKnown RBP12.86□□□□□ -0.35
SNRNP70-202ENST00000401730 TEX15Q9BXT5 2789 aa12.85□□□□□ -0.35
SNRNP70-202ENST00000401730 PIMREGQ9BSJ6 248 aa12.85□□□□□ -0.35
SNRNP70-202ENST00000401730 LINC00477Q96M19 166 aa12.84□□□□□ -0.35
SNRNP70-202ENST00000401730 TRAV26-1A0A087WT03 109 aa12.84□□□□□ -0.35
SNRNP70-202ENST00000401730 PHLDA1Q8WV24 401 aaPredicted RBP12.84□□□□□ -0.35
SNRNP70-202ENST00000401730 FAM223BA6NKX1 122 aa12.84□□□□□ -0.35
SNRNP70-202ENST00000401730 APOMO95445 188 aa12.84□□□□□ -0.35
SNRNP70-202ENST00000401730 CD7P09564 240 aa12.84□□□□□ -0.35
SNRNP70-202ENST00000401730 SRSF2Q01130 221 aaKnown RBP12.84□□□□□ -0.35
SNRNP70-202ENST00000401730 FAM223AQ8IWN6 122 aa12.84□□□□□ -0.35
SNRNP70-202ENST00000401730 KLHL30-AS1Q8NEE0 82 aa12.84□□□□□ -0.35
SNRNP70-202ENST00000401730 NDUFS8O00217 210 aa12.83□□□□□ -0.36
SNRNP70-202ENST00000401730 C2orf66Q6UXQ4 117 aa12.83□□□□□ -0.36
SNRNP70-202ENST00000401730 TMEM190Q8WZ59 177 aa12.83□□□□□ -0.36
SNRNP70-202ENST00000401730 A0A087WX48 190 aa12.83□□□□□ -0.36
SNRNP70-202ENST00000401730 F8W1H4 67 aa12.83□□□□□ -0.36
SNRNP70-202ENST00000401730 RPL39P62891 51 aaKnown RBP12.83□□□□□ -0.36
SNRNP70-202ENST00000401730 ZMAT4Q9H898 229 aa12.83□□□□□ -0.36
SNRNP70-202ENST00000401730 E9PLD3 99 aa12.82□□□□□ -0.36
SNRNP70-202ENST00000401730 DUSP14O95147 198 aaKnown RBP12.82□□□□□ -0.36
SNRNP70-202ENST00000401730 KLK9Q9UKQ9 250 aa12.82□□□□□ -0.36
SNRNP70-202ENST00000401730 ZNF256Q9Y2P7 627 aaPredicted RBP12.82□□□□□ -0.36
SNRNP70-202ENST00000401730 DPH3P1Q9H4G8 78 aa12.82□□□□□ -0.36
SNRNP70-202ENST00000401730 MRPL16Q9NX20 251 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms