RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 LURAP1LQ8IV03 231 aa14.12□□□□□ -0.15
COL18A1-204ENST00000400337 MSRB1Q9NZV6 116 aa14.12□□□□□ -0.15
COL18A1-204ENST00000400337 MRPL36Q9P0J6 103 aaKnown RBP14.12□□□□□ -0.15
COL18A1-204ENST00000400337 C16orf54Q6UWD8 224 aa14.12□□□□□ -0.15
COL18A1-204ENST00000400337 A0A0J9YY99 117 aa14.12□□□□□ -0.15
COL18A1-204ENST00000400337 NPSP0C0P6 89 aa14.12□□□□□ -0.15
COL18A1-204ENST00000400337 FGF6P10767 208 aa14.12□□□□□ -0.15
COL18A1-204ENST00000400337 CEND1Q8N111 149 aa14.12□□□□□ -0.15
COL18A1-204ENST00000400337 LTBP2Q14767 1821 aa14.12□□□□□ -0.15
COL18A1-204ENST00000400337 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.11□□□□□ -0.15
COL18A1-204ENST00000400337 IGKV2-29A2NJV5 120 aaPredicted RBP14.11□□□□□ -0.15
COL18A1-204ENST00000400337 ETDBQ3ZM63 59 aa14.11□□□□□ -0.15
COL18A1-204ENST00000400337 RPL39LQ96EH5 51 aaKnown RBP14.1□□□□□ -0.15
COL18A1-204ENST00000400337 PRO1854Q9UHT4 67 aa14.1□□□□□ -0.15
COL18A1-204ENST00000400337 ATRXP46100 2492 aa14.1□□□□□ -0.15
COL18A1-204ENST00000400337 CRYGCP07315 174 aa14.1□□□□□ -0.15
COL18A1-204ENST00000400337 PRAC2D3DTV9 90 aa14.1□□□□□ -0.15
COL18A1-204ENST00000400337 K7EP34 96 aa14.1□□□□□ -0.15
COL18A1-204ENST00000400337 K7ERJ3 54 aa14.1□□□□□ -0.15
COL18A1-204ENST00000400337 NCOA6Q14686 2063 aaPredicted RBP14.1□□□□□ -0.15
COL18A1-204ENST00000400337 KMT2EQ8IZD2 1858 aa14.1□□□□□ -0.15
COL18A1-204ENST00000400337 NCKAP5O14513 1909 aa14.1□□□□□ -0.15
COL18A1-204ENST00000400337 WI2-2373I1.2A0A1W2PRP0 233 aa14.09□□□□□ -0.15
COL18A1-204ENST00000400337 FBXL19-AS1Q494R0 122 aa14.09□□□□□ -0.15
COL18A1-204ENST00000400337 EDA2RQ9HAV5 297 aa14.09□□□□□ -0.15
COL18A1-204ENST00000400337 IGHV4OR15-8A0A075B7B6 117 aa14.09□□□□□ -0.15
COL18A1-204ENST00000400337 A0A087WW49 117 aa14.09□□□□□ -0.15
COL18A1-204ENST00000400337 NKAPP1Q8N9T2 125 aa14.09□□□□□ -0.15
COL18A1-204ENST00000400337 A0A1W2PPM0 123 aa14.08□□□□□ -0.16
COL18A1-204ENST00000400337 CDK2AP2O75956 126 aa14.08□□□□□ -0.16
COL18A1-204ENST00000400337 TAL2Q16559 108 aa14.08□□□□□ -0.16
COL18A1-204ENST00000400337 SOCS3O14543 225 aa14.08□□□□□ -0.16
COL18A1-204ENST00000400337 INAFM2P0DMQ5 153 aa14.08□□□□□ -0.16
COL18A1-204ENST00000400337 CDPF1Q6NVV7 123 aa14.08□□□□□ -0.16
COL18A1-204ENST00000400337 K7EP13 123 aa14.07□□□□□ -0.16
COL18A1-204ENST00000400337 SUMO4Q6EEV6 95 aa14.07□□□□□ -0.16
COL18A1-204ENST00000400337 OTOGLQ3ZCN5 2332 aa14.07□□□□□ -0.16
COL18A1-204ENST00000400337 F8W1H4 67 aa14.07□□□□□ -0.16
COL18A1-204ENST00000400337 K7EMI3 77 aa14.07□□□□□ -0.16
COL18A1-204ENST00000400337 PPDPFLQ8WWR9 84 aa14.07□□□□□ -0.16
COL18A1-204ENST00000400337 XCL1P47992 114 aa14.07□□□□□ -0.16
COL18A1-204ENST00000400337 SIRPDQ9H106 197 aa14.07□□□□□ -0.16
COL18A1-204ENST00000400337 NUPR1O60356 82 aa14.07□□□□□ -0.16
COL18A1-204ENST00000400337 SIVA1O15304 175 aa14.06□□□□□ -0.16
COL18A1-204ENST00000400337 PCP2Q8IVA1 136 aa14.06□□□□□ -0.16
COL18A1-204ENST00000400337 COA6Q5JTJ3 125 aaKnown RBP14.05□□□□□ -0.16
COL18A1-204ENST00000400337 GTSF1Q8WW33 167 aa14.05□□□□□ -0.16
COL18A1-204ENST00000400337 MRAPQ8TCY5 172 aa14.05□□□□□ -0.16
COL18A1-204ENST00000400337 Q6ZQT7 251 aa14.05□□□□□ -0.16
COL18A1-204ENST00000400337 PCDH15Q96QU1 1955 aa14.04□□□□□ -0.16
COL18A1-204ENST00000400337 DENND4AQ7Z401 1863 aa14.04□□□□□ -0.16
COL18A1-204ENST00000400337 H3BMG7 143 aa14.04□□□□□ -0.16
COL18A1-204ENST00000400337 LINC00173Q6ZV60 143 aa14.04□□□□□ -0.16
COL18A1-204ENST00000400337 SCRT2Q9NQ03 307 aa14.04□□□□□ -0.16
COL18A1-204ENST00000400337 C2orf70A6NJV1 201 aa14.04□□□□□ -0.16
COL18A1-204ENST00000400337 DEFB1P60022 68 aa14.04□□□□□ -0.16
COL18A1-204ENST00000400337 IGHG2P01859 326 aa14.03□□□□□ -0.16
COL18A1-204ENST00000400337 PTPN13Q12923 2485 aa14.03□□□□□ -0.16
COL18A1-204ENST00000400337 C9orf66Q5T8R8 295 aa14.03□□□□□ -0.16
COL18A1-204ENST00000400337 AMTNQ6UX39 209 aa14.03□□□□□ -0.16
COL18A1-204ENST00000400337 Q6ZPA2 131 aa14.03□□□□□ -0.16
COL18A1-204ENST00000400337 C11orf1Q9H5F2 150 aa14.03□□□□□ -0.16
COL18A1-204ENST00000400337 OBSL1O75147 1896 aa14.02□□□□□ -0.16
COL18A1-204ENST00000400337 C12orf74Q32Q52 190 aa14.02□□□□□ -0.16
COL18A1-204ENST00000400337 PIFOQ8TCI5 191 aa14.02□□□□□ -0.16
COL18A1-204ENST00000400337 FANCD2OSQ96PS1 177 aa14.02□□□□□ -0.16
COL18A1-204ENST00000400337 PROP1O75360 226 aa14.02□□□□□ -0.17
COL18A1-204ENST00000400337 UTF1Q5T230 341 aa14.02□□□□□ -0.17
COL18A1-204ENST00000400337 Q9H8V8 135 aa14.02□□□□□ -0.17
COL18A1-204ENST00000400337 RNF152Q8N8N0 203 aa14.02□□□□□ -0.17
COL18A1-204ENST00000400337 C22orf34Q6ZV56 151 aa14.01□□□□□ -0.17
COL18A1-204ENST00000400337 Q8N1Y9 231 aa14.01□□□□□ -0.17
COL18A1-204ENST00000400337 PRO3102Q9H379 93 aa14.01□□□□□ -0.17
COL18A1-204ENST00000400337 TRAV13-2A0A0B4J235 113 aa14.01□□□□□ -0.17
COL18A1-204ENST00000400337 TNCP24821 2201 aa14.01□□□□□ -0.17
COL18A1-204ENST00000400337 K7EMT4 169 aa14.01□□□□□ -0.17
COL18A1-204ENST00000400337 C9orf47Q6ZRZ4 202 aa14.01□□□□□ -0.17
COL18A1-204ENST00000400337 HIVEP2P31629 2446 aa14.01□□□□□ -0.17
COL18A1-204ENST00000400337 RMI2Q96E14 147 aa14.01□□□□□ -0.17
COL18A1-204ENST00000400337 CARD19Q96LW7 228 aa14□□□□□ -0.17
COL18A1-204ENST00000400337 SPANXA1Q9NS26 97 aa14□□□□□ -0.17
COL18A1-204ENST00000400337 UNQ9165/PRO28630Q6UXU0 137 aa14□□□□□ -0.17
COL18A1-204ENST00000400337 ZFP2Q6ZN57 461 aa14□□□□□ -0.17
COL18A1-204ENST00000400337 C5orf38Q86SI9 138 aa14□□□□□ -0.17
COL18A1-204ENST00000400337 GPHB5Q86YW7 130 aa14□□□□□ -0.17
COL18A1-204ENST00000400337 C16orf74Q96GX8 76 aa14□□□□□ -0.17
COL18A1-204ENST00000400337 TMEM126AQ9H061 195 aa14□□□□□ -0.17
COL18A1-204ENST00000400337 TRBV12-3P01733 135 aa14□□□□□ -0.17
COL18A1-204ENST00000400337 P0C879 139 aa14□□□□□ -0.17
COL18A1-204ENST00000400337 TMEM131Q92545 1883 aa14□□□□□ -0.17
COL18A1-204ENST00000400337 ZMAT4Q9H898 229 aa14□□□□□ -0.17
COL18A1-204ENST00000400337 SONP18583 2426 aaKnown RBP13.99□□□□□ -0.17
COL18A1-204ENST00000400337 IGKV2D-24A0A075B6R9 120 aa13.99□□□□□ -0.17
COL18A1-204ENST00000400337 CGB3P0DN86 165 aa13.99□□□□□ -0.17
COL18A1-204ENST00000400337 CGB7P0DN87 165 aa13.99□□□□□ -0.17
COL18A1-204ENST00000400337 GYPEP15421 78 aa13.99□□□□□ -0.17
COL18A1-204ENST00000400337 KIR2DL5BA0A0G2JN68 375 aa13.99□□□□□ -0.17
COL18A1-204ENST00000400337 KIR2DL5BA0A0G2JPC4 375 aa13.99□□□□□ -0.17
COL18A1-204ENST00000400337 BRWD1-AS2P59051 145 aa13.99□□□□□ -0.17
COL18A1-204ENST00000400337 CRIP3Q6Q6R5 217 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms