RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 TRAV21A0A0B4J279 112 aa10.47□□□□□ -0.73
SIRPA-203ENST00000400068 MRPL51Q4U2R6 128 aaKnown RBP10.47□□□□□ -0.73
SIRPA-203ENST00000400068 HIST2H2BDQ6DRA6 164 aa10.47□□□□□ -0.73
SIRPA-203ENST00000400068 WIPF2Q8TF74 440 aaPredicted RBP10.47□□□□□ -0.73
SIRPA-203ENST00000400068 TNFRSF18Q9Y5U5 241 aa10.47□□□□□ -0.73
SIRPA-203ENST00000400068 TRAV12-2A0A075B6T6 113 aa10.47□□□□□ -0.73
SIRPA-203ENST00000400068 A0A087WWL8 130 aa10.47□□□□□ -0.73
SIRPA-203ENST00000400068 SAMD5Q5TGI4 173 aa10.47□□□□□ -0.73
SIRPA-203ENST00000400068 PPDPFQ9H3Y8 114 aa10.47□□□□□ -0.73
SIRPA-203ENST00000400068 TMEM8BA6NDV4 472 aa10.46□□□□□ -0.73
SIRPA-203ENST00000400068 NPYP01303 97 aa10.46□□□□□ -0.73
SIRPA-203ENST00000400068 ODF3BA8MYP8 253 aa10.46□□□□□ -0.74
SIRPA-203ENST00000400068 IGLL1P15814 213 aa10.46□□□□□ -0.74
SIRPA-203ENST00000400068 FAM104BQ5XKR9 115 aa10.46□□□□□ -0.74
SIRPA-203ENST00000400068 LINC01356Q8N9X3 169 aa10.46□□□□□ -0.74
SIRPA-203ENST00000400068 SCGB3A1Q96QR1 104 aa10.46□□□□□ -0.74
SIRPA-203ENST00000400068 TP53TG3Q9ULZ0 132 aa10.46□□□□□ -0.74
SIRPA-203ENST00000400068 Q1RN00 199 aa10.45□□□□□ -0.74
SIRPA-203ENST00000400068 DEFB136Q30KP8 78 aa10.45□□□□□ -0.74
SIRPA-203ENST00000400068 UNQ9165/PRO28630Q6UXU0 137 aa10.45□□□□□ -0.74
SIRPA-203ENST00000400068 C5orf56Q8N8D9 126 aa10.45□□□□□ -0.74
SIRPA-203ENST00000400068 GFRA4Q9GZZ7 299 aa10.45□□□□□ -0.74
SIRPA-203ENST00000400068 CD5LO43866 347 aa10.45□□□□□ -0.74
SIRPA-203ENST00000400068 GAGE13Q4V321 117 aa10.45□□□□□ -0.74
SIRPA-203ENST00000400068 CT83Q5H943 113 aa10.45□□□□□ -0.74
SIRPA-203ENST00000400068 C9orf139Q6ZV77 190 aa10.45□□□□□ -0.74
SIRPA-203ENST00000400068 LINC00477Q96M19 166 aa10.45□□□□□ -0.74
SIRPA-203ENST00000400068 DAZ1Q9NQZ3 744 aaKnown RBP10.45□□□□□ -0.74
SIRPA-203ENST00000400068 BUB3O43684 328 aa10.45□□□□□ -0.74
SIRPA-203ENST00000400068 PAX1P15863 534 aa10.45□□□□□ -0.74
SIRPA-203ENST00000400068 GATA3P23771 443 aa10.45□□□□□ -0.74
SIRPA-203ENST00000400068 DGAT2L7PQ6IED9 249 aa10.45□□□□□ -0.74
SIRPA-203ENST00000400068 C10orf105Q8TEF2 133 aa10.45□□□□□ -0.74
SIRPA-203ENST00000400068 Q96MF0 132 aa10.45□□□□□ -0.74
SIRPA-203ENST00000400068 MRPS16Q9Y3D3 137 aaKnown RBP10.45□□□□□ -0.74
SIRPA-203ENST00000400068 NEGR1Q7Z3B1 354 aa10.44□□□□□ -0.74
SIRPA-203ENST00000400068 TMEM158Q8WZ71 300 aa10.44□□□□□ -0.74
SIRPA-203ENST00000400068 KLF12Q9Y4X4 402 aa10.44□□□□□ -0.74
SIRPA-203ENST00000400068 LRBAP50851 2863 aa10.44□□□□□ -0.74
SIRPA-203ENST00000400068 SMIM9A6NGZ8 99 aa10.44□□□□□ -0.74
SIRPA-203ENST00000400068 FAM223BA6NKX1 122 aa10.44□□□□□ -0.74
SIRPA-203ENST00000400068 SH2D6Q7Z4S9 175 aa10.44□□□□□ -0.74
SIRPA-203ENST00000400068 FAM223AQ8IWN6 122 aa10.44□□□□□ -0.74
SIRPA-203ENST00000400068 SIGLEC8Q9NYZ4 499 aa10.44□□□□□ -0.74
SIRPA-203ENST00000400068 COL12A1Q99715 3063 aa10.44□□□□□ -0.74
SIRPA-203ENST00000400068 WI2-2373I1.2A0A1W2PRP0 233 aa10.44□□□□□ -0.74
SIRPA-203ENST00000400068 GTSCR1Q86UQ5 136 aa10.44□□□□□ -0.74
SIRPA-203ENST00000400068 PRORYQ9H606 182 aa10.44□□□□□ -0.74
SIRPA-203ENST00000400068 TP73-AS1Q9UF72 201 aa10.44□□□□□ -0.74
SIRPA-203ENST00000400068 SPINK13Q1W4C9 94 aa10.43□□□□□ -0.74
SIRPA-203ENST00000400068 TCTEX1D4Q5JR98 221 aa10.43□□□□□ -0.74
SIRPA-203ENST00000400068 ZNF80P51504 273 aaPredicted RBP10.43□□□□□ -0.74
SIRPA-203ENST00000400068 KLK9Q9UKQ9 250 aa10.43□□□□□ -0.74
SIRPA-203ENST00000400068 USMG5Q96IX5 58 aa10.43□□□□□ -0.74
SIRPA-203ENST00000400068 JMJD8Q96S16 334 aa10.43□□□□□ -0.74
SIRPA-203ENST00000400068 MS4A6AQ9H2W1 248 aa10.43□□□□□ -0.74
SIRPA-203ENST00000400068 RNF114Q9Y508 228 aa10.43□□□□□ -0.74
SIRPA-203ENST00000400068 PRSS29PA6NIE9 313 aa10.42□□□□□ -0.74
SIRPA-203ENST00000400068 OVOL1O14753 267 aa10.42□□□□□ -0.74
SIRPA-203ENST00000400068 IFITM1P13164 125 aa10.42□□□□□ -0.74
SIRPA-203ENST00000400068 CCDC140Q96MF4 163 aa10.42□□□□□ -0.74
SIRPA-203ENST00000400068 NHP2Q9NX24 153 aaKnown RBP10.42□□□□□ -0.74
SIRPA-203ENST00000400068 PSMB2P49721 201 aa10.41□□□□□ -0.74
SIRPA-203ENST00000400068 TMEM170BQ5T4T1 132 aa10.41□□□□□ -0.74
SIRPA-203ENST00000400068 HIST2H2BCQ6DN03 193 aa10.41□□□□□ -0.74
SIRPA-203ENST00000400068 RAX2Q96IS3 184 aa10.41□□□□□ -0.74
SIRPA-203ENST00000400068 KIR2DL4Q99706 377 aa10.41□□□□□ -0.74
SIRPA-203ENST00000400068 HOXA3O43365 443 aaPredicted RBP10.41□□□□□ -0.74
SIRPA-203ENST00000400068 GNRH2O43555 120 aa10.41□□□□□ -0.74
SIRPA-203ENST00000400068 AJUBAQ96IF1 538 aa10.41□□□□□ -0.74
SIRPA-203ENST00000400068 KNCNA6PVL3 124 aa10.41□□□□□ -0.74
SIRPA-203ENST00000400068 VWC2LB2RUY7 222 aa10.41□□□□□ -0.74
SIRPA-203ENST00000400068 HERVK_113P61574 105 aa10.41□□□□□ -0.74
SIRPA-203ENST00000400068 HIST1H4GQ99525 98 aa10.41□□□□□ -0.74
SIRPA-203ENST00000400068 KIR3DS1Q14943 382 aa10.41□□□□□ -0.74
SIRPA-203ENST00000400068 TEX43Q6ZNM6 134 aa10.41□□□□□ -0.74
SIRPA-203ENST00000400068 MRAPQ8TCY5 172 aa10.41□□□□□ -0.74
SIRPA-203ENST00000400068 NXT2Q9NPJ8 142 aaKnown RBP10.41□□□□□ -0.74
SIRPA-203ENST00000400068 C19orf71A6NCJ1 209 aa10.4□□□□□ -0.74
SIRPA-203ENST00000400068 H7C2G1 150 aa10.4□□□□□ -0.74
SIRPA-203ENST00000400068 SLC25A16P16260 332 aa10.4□□□□□ -0.74
SIRPA-203ENST00000400068 C10orf99Q6UWK7 81 aa10.4□□□□□ -0.74
SIRPA-203ENST00000400068 Q6ZS46 218 aa10.4□□□□□ -0.74
SIRPA-203ENST00000400068 MLST8Q9BVC4 326 aa10.4□□□□□ -0.74
SIRPA-203ENST00000400068 J3KT08 172 aa10.4□□□□□ -0.74
SIRPA-203ENST00000400068 KLHL30-AS1Q8NEE0 82 aa10.4□□□□□ -0.74
SIRPA-203ENST00000400068 LINC01587Q99440 93 aa10.4□□□□□ -0.74
SIRPA-203ENST00000400068 MRGPRG-AS1Q2M3A8 158 aa10.4□□□□□ -0.75
SIRPA-203ENST00000400068 ZFHX4Q86UP3 3567 aa10.39□□□□□ -0.75
SIRPA-203ENST00000400068 SEC11AP67812 179 aa10.39□□□□□ -0.75
SIRPA-203ENST00000400068 MBD6Q96DN6 1003 aa10.39□□□□□ -0.75
SIRPA-203ENST00000400068 K7EP34 96 aa10.39□□□□□ -0.75
SIRPA-203ENST00000400068 IGF1P05019 195 aa10.39□□□□□ -0.75
SIRPA-203ENST00000400068 CRIP1P50238 77 aa10.39□□□□□ -0.75
SIRPA-203ENST00000400068 DSCR9P59020 149 aa10.39□□□□□ -0.75
SIRPA-203ENST00000400068 DEFB131AP59861 70 aa10.39□□□□□ -0.75
SIRPA-203ENST00000400068 LOXL1Q08397 574 aaPredicted RBP10.39□□□□□ -0.75
SIRPA-203ENST00000400068 VPREB3Q9UKI3 123 aa10.39□□□□□ -0.75
SIRPA-203ENST00000400068 IGHV3-64A0A075B6Q5 118 aa10.38□□□□□ -0.75
SIRPA-203ENST00000400068 IGKV3OR2-268A0A0C4DH90 116 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms