RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 FAM110DQ8TAY7 271 aaPredicted RBP7.74□□□□□ -1.17
PTPRM-203ENST00000400060 RNF185Q96GF1 192 aa7.74□□□□□ -1.17
PTPRM-203ENST00000400060 AGPAT4-IT1Q9H0P7 198 aa7.74□□□□□ -1.17
PTPRM-203ENST00000400060 IGKV3D-7A0A0C4DH55 119 aa7.73□□□□□ -1.17
PTPRM-203ENST00000400060 PAX4O43316 350 aa7.73□□□□□ -1.17
PTPRM-203ENST00000400060 TRIAP1O43715 76 aa7.73□□□□□ -1.17
PTPRM-203ENST00000400060 PFN2P35080 140 aa7.73□□□□□ -1.17
PTPRM-203ENST00000400060 CLEC2BQ92478 149 aa7.73□□□□□ -1.17
PTPRM-203ENST00000400060 TRAV12-2A0A075B6T6 113 aa7.73□□□□□ -1.17
PTPRM-203ENST00000400060 ADARB2-AS1A8MUL3 147 aa7.73□□□□□ -1.17
PTPRM-203ENST00000400060 IGKV3-7A0A075B6H7 116 aa7.73□□□□□ -1.17
PTPRM-203ENST00000400060 HRCT1Q6UXD1 115 aa7.73□□□□□ -1.17
PTPRM-203ENST00000400060 TMEM178BH3BS89 294 aa7.73□□□□□ -1.17
PTPRM-203ENST00000400060 MDS2Q8NDY4 140 aa7.73□□□□□ -1.17
PTPRM-203ENST00000400060 CNFNQ9BYD5 112 aa7.73□□□□□ -1.17
PTPRM-203ENST00000400060 PKIGQ9Y2B9 76 aa7.73□□□□□ -1.17
PTPRM-203ENST00000400060 PHF3Q92576 2039 aaKnown RBP7.73□□□□□ -1.17
PTPRM-203ENST00000400060 IGHV1-58A0A0C4DH39 117 aa7.72□□□□□ -1.17
PTPRM-203ENST00000400060 COL8A2P25067 703 aa7.72□□□□□ -1.17
PTPRM-203ENST00000400060 DYNAPQ8N1N2 210 aa7.72□□□□□ -1.17
PTPRM-203ENST00000400060 AJUBAQ96IF1 538 aa7.72□□□□□ -1.17
PTPRM-203ENST00000400060 C17orf77Q96MU5 243 aa7.72□□□□□ -1.17
PTPRM-203ENST00000400060 MSRB1Q9NZV6 116 aa7.72□□□□□ -1.17
PTPRM-203ENST00000400060 ADAMTS9Q9P2N4 1935 aa7.72□□□□□ -1.17
PTPRM-203ENST00000400060 EP300Q09472 2414 aaPredicted RBP7.72□□□□□ -1.17
PTPRM-203ENST00000400060 C15orf32Q32M92 178 aa7.72□□□□□ -1.17
PTPRM-203ENST00000400060 NCOR1O75376 2440 aa7.72□□□□□ -1.17
PTPRM-203ENST00000400060 PDE6GP18545 87 aa7.72□□□□□ -1.17
PTPRM-203ENST00000400060 C9orf47Q6ZRZ4 202 aa7.72□□□□□ -1.17
PTPRM-203ENST00000400060 JPT2Q9H910 190 aa7.71□□□□□ -1.17
PTPRM-203ENST00000400060 TMEM223A0PJW6 202 aa7.71□□□□□ -1.18
PTPRM-203ENST00000400060 ZNF503-AS2A6NEH8 195 aa7.71□□□□□ -1.18
PTPRM-203ENST00000400060 IGLV2-11P01706 119 aa7.71□□□□□ -1.18
PTPRM-203ENST00000400060 HTN1P15515 57 aa7.71□□□□□ -1.18
PTPRM-203ENST00000400060 WT1P19544 449 aaPredicted RBP7.71□□□□□ -1.18
PTPRM-203ENST00000400060 PI4KAP42356 2102 aa7.71□□□□□ -1.18
PTPRM-203ENST00000400060 TOMM7Q9P0U1 55 aa7.71□□□□□ -1.18
PTPRM-203ENST00000400060 IGHV3-35A0A0C4DH35 117 aa7.71□□□□□ -1.18
PTPRM-203ENST00000400060 H7C423 109 aa7.71□□□□□ -1.18
PTPRM-203ENST00000400060 LINC00574Q9H8X3 128 aa7.71□□□□□ -1.18
PTPRM-203ENST00000400060 IGHV3OR16-13A0A075B7E8 117 aa7.71□□□□□ -1.18
PTPRM-203ENST00000400060 IGHV3-74A0A0B4J1X5 117 aa7.71□□□□□ -1.18
PTPRM-203ENST00000400060 BSPH1Q075Z2 132 aa7.71□□□□□ -1.18
PTPRM-203ENST00000400060 TINCRA0A1B0GVN0 87 aa7.7□□□□□ -1.18
PTPRM-203ENST00000400060 ICE1Q9Y2F5 2266 aa7.7□□□□□ -1.18
PTPRM-203ENST00000400060 USP17L23D6RBM5 183 aa7.7□□□□□ -1.18
PTPRM-203ENST00000400060 DSCR8Q96T75 97 aa7.7□□□□□ -1.18
PTPRM-203ENST00000400060 IGLV1-44P01699 117 aa7.7□□□□□ -1.18
PTPRM-203ENST00000400060 DAZ2Q13117 558 aaKnown RBP7.7□□□□□ -1.18
PTPRM-203ENST00000400060 FAM222AQ5U5X8 452 aa7.7□□□□□ -1.18
PTPRM-203ENST00000400060 DAZ4Q86SG3 579 aaKnown RBP7.7□□□□□ -1.18
PTPRM-203ENST00000400060 DAZ1Q9NQZ3 744 aaKnown RBP7.7□□□□□ -1.18
PTPRM-203ENST00000400060 DAZ3Q9NR90 486 aaKnown RBP7.7□□□□□ -1.18
PTPRM-203ENST00000400060 SHANK1Q9Y566 2161 aa7.7□□□□□ -1.18
PTPRM-203ENST00000400060 IGKV1-17P01599 117 aa7.7□□□□□ -1.18
PTPRM-203ENST00000400060 A0A087WWL8 130 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 A0A096LNJ9 63 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 IGKV3D-20A0A0C4DH25 116 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 IGFL4Q6B9Z1 124 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 RNF152Q8N8N0 203 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 C10orf105Q8TEF2 133 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 ESPL1Q14674 2120 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 LHBP01229 141 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 PLA2G5P39877 138 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 RPL39LQ96EH5 51 aaKnown RBP7.69□□□□□ -1.18
PTPRM-203ENST00000400060 FANCD2OSQ96PS1 177 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 IGHV3-49A0A0A0MS15 119 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 IGLV2-23P01705 113 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 SEC61GP60059 68 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 C1orf159Q96HA4 380 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 SNRNP200O75643 2136 aaKnown RBP7.69□□□□□ -1.18
PTPRM-203ENST00000400060 A0A0U1RRA0 63 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 IGHG3P01860 377 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 SUMO4Q6EEV6 95 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 Q6ZQT7 251 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 USMG5Q96IX5 58 aa7.69□□□□□ -1.18
PTPRM-203ENST00000400060 LY6G6EA0A0G2JKS1 128 aa7.68□□□□□ -1.18
PTPRM-203ENST00000400060 HOXB4P17483 251 aaPredicted RBP7.68□□□□□ -1.18
PTPRM-203ENST00000400060 HAMPP81172 84 aa7.68□□□□□ -1.18
PTPRM-203ENST00000400060 U3KQA8 63 aa7.68□□□□□ -1.18
PTPRM-203ENST00000400060 IGHV4-4A0A075B6R2 117 aa7.68□□□□□ -1.18
PTPRM-203ENST00000400060 LYRM9A8MSI8 78 aa7.68□□□□□ -1.18
PTPRM-203ENST00000400060 RPL36AP83881 106 aaKnown RBP7.68□□□□□ -1.18
PTPRM-203ENST00000400060 RPL36ALQ969Q0 106 aaKnown RBP7.68□□□□□ -1.18
PTPRM-203ENST00000400060 ZNF625Q96I27 306 aaPredicted RBP7.68□□□□□ -1.18
PTPRM-203ENST00000400060 LINC01587Q99440 93 aa7.68□□□□□ -1.18
PTPRM-203ENST00000400060 GPR179Q6PRD1 2367 aa7.68□□□□□ -1.18
PTPRM-203ENST00000400060 COX8CQ7Z4L0 72 aa7.68□□□□□ -1.18
PTPRM-203ENST00000400060 F8WDY8 70 aa7.67□□□□□ -1.18
PTPRM-203ENST00000400060 K7EIM0 57 aa7.67□□□□□ -1.18
PTPRM-203ENST00000400060 SMCPP49901 116 aaPredicted RBP7.67□□□□□ -1.18
PTPRM-203ENST00000400060 NSUN5P1Q3KNT7 163 aa7.67□□□□□ -1.18
PTPRM-203ENST00000400060 TPSG1Q9NRR2 321 aa7.67□□□□□ -1.18
PTPRM-203ENST00000400060 IGHV3-30-3P0DP02 117 aa7.67□□□□□ -1.18
PTPRM-203ENST00000400060 C20orf197Q8N268 126 aa7.67□□□□□ -1.18
PTPRM-203ENST00000400060 ODF3Q96PU9 254 aa7.67□□□□□ -1.18
PTPRM-203ENST00000400060 IGLV3-9A0A075B6K5 115 aa7.66□□□□□ -1.18
PTPRM-203ENST00000400060 CRLF1O75462 422 aa7.66□□□□□ -1.18
PTPRM-203ENST00000400060 SDIM1Q6ZPB5 146 aa7.66□□□□□ -1.18
PTPRM-203ENST00000400060 NRACQ8N912 160 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms