RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 CHD3Q12873 2000 aaKnown RBP8.67□□□□□ -1.02
CACNA1C-216ENST00000399638 FAM231BA6NCW3 169 aa8.67□□□□□ -1.02
CACNA1C-216ENST00000399638 IGKV1-16P04430 117 aa8.67□□□□□ -1.02
CACNA1C-216ENST00000399638 WFDC10BQ8IUB3 73 aa8.67□□□□□ -1.02
CACNA1C-216ENST00000399638 LY6G6DO95868 133 aa8.67□□□□□ -1.02
CACNA1C-216ENST00000399638 IGLL1P15814 213 aa8.67□□□□□ -1.02
CACNA1C-216ENST00000399638 MLANAQ16655 118 aa8.67□□□□□ -1.02
CACNA1C-216ENST00000399638 C17orf82Q86X59 251 aaPredicted RBP8.67□□□□□ -1.02
CACNA1C-216ENST00000399638 PSMB8P28062 276 aa8.66□□□□□ -1.02
CACNA1C-216ENST00000399638 ODF1Q14990 250 aa8.66□□□□□ -1.02
CACNA1C-216ENST00000399638 C1orf147Q96MC9 270 aaPredicted RBP8.66□□□□□ -1.02
CACNA1C-216ENST00000399638 B3GALT5-AS1P59052 145 aa8.66□□□□□ -1.02
CACNA1C-216ENST00000399638 SHANK2-AS3Q9BTD1 123 aa8.66□□□□□ -1.02
CACNA1C-216ENST00000399638 C5orf63A6NC05 138 aa8.66□□□□□ -1.02
CACNA1C-216ENST00000399638 C10orf105Q8TEF2 133 aa8.66□□□□□ -1.02
CACNA1C-216ENST00000399638 MRPL53Q96EL3 112 aaKnown RBP8.66□□□□□ -1.02
CACNA1C-216ENST00000399638 POLR3KQ9Y2Y1 108 aaPredicted RBP8.66□□□□□ -1.02
CACNA1C-216ENST00000399638 C5orf38Q86SI9 138 aa8.66□□□□□ -1.02
CACNA1C-216ENST00000399638 SMIM20Q8N5G0 67 aa8.66□□□□□ -1.02
CACNA1C-216ENST00000399638 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.66□□□□□ -1.02
CACNA1C-216ENST00000399638 IGKV2-29A2NJV5 120 aaPredicted RBP8.66□□□□□ -1.02
CACNA1C-216ENST00000399638 TEX49A0A1B0GTD5 131 aa8.65□□□□□ -1.02
CACNA1C-216ENST00000399638 WIPF3A6NGB9 483 aa8.65□□□□□ -1.02
CACNA1C-216ENST00000399638 ADORA2A-AS1P86434 159 aa8.65□□□□□ -1.02
CACNA1C-216ENST00000399638 ZC2HC1BQ5TFG8 222 aa8.65□□□□□ -1.02
CACNA1C-216ENST00000399638 USP17L23D6RBM5 183 aa8.65□□□□□ -1.02
CACNA1C-216ENST00000399638 NDUFA11Q86Y39 141 aa8.65□□□□□ -1.02
CACNA1C-216ENST00000399638 H3BMG7 143 aa8.65□□□□□ -1.02
CACNA1C-216ENST00000399638 BAALC-AS2P0C853 105 aa8.65□□□□□ -1.02
CACNA1C-216ENST00000399638 NREPQ16612 68 aa8.65□□□□□ -1.02
CACNA1C-216ENST00000399638 PRORYQ9H606 182 aa8.65□□□□□ -1.02
CACNA1C-216ENST00000399638 LYPD1Q8N2G4 141 aa8.65□□□□□ -1.03
CACNA1C-216ENST00000399638 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.64□□□□□ -1.03
CACNA1C-216ENST00000399638 PLXNA4Q9HCM2 1894 aa8.64□□□□□ -1.03
CACNA1C-216ENST00000399638 LINC00473A8K010 186 aa8.64□□□□□ -1.03
CACNA1C-216ENST00000399638 SMPXQ9UHP9 88 aa8.64□□□□□ -1.03
CACNA1C-216ENST00000399638 HHLA3Q9XRX5 114 aa8.64□□□□□ -1.03
CACNA1C-216ENST00000399638 DEFB125Q8N687 156 aa8.64□□□□□ -1.03
CACNA1C-216ENST00000399638 TRAV4A0A0B4J268 109 aa8.64□□□□□ -1.03
CACNA1C-216ENST00000399638 FNDC10F2Z333 226 aa8.64□□□□□ -1.03
CACNA1C-216ENST00000399638 H3BUA1 57 aa8.64□□□□□ -1.03
CACNA1C-216ENST00000399638 COX7A2LO14548 114 aa8.64□□□□□ -1.03
CACNA1C-216ENST00000399638 CUL9Q8IWT3 2517 aa8.64□□□□□ -1.03
CACNA1C-216ENST00000399638 A0A087WZ39 114 aa8.64□□□□□ -1.03
CACNA1C-216ENST00000399638 IGKV1-6A0A0C4DH72 117 aa8.64□□□□□ -1.03
CACNA1C-216ENST00000399638 SCXQ7RTU7 201 aa8.64□□□□□ -1.03
CACNA1C-216ENST00000399638 KLHDC3Q9BQ90 382 aa8.64□□□□□ -1.03
CACNA1C-216ENST00000399638 MGAMO43451 1857 aa8.63□□□□□ -1.03
CACNA1C-216ENST00000399638 TMEM213A2RRL7 107 aa8.63□□□□□ -1.03
CACNA1C-216ENST00000399638 LOXP28300 417 aaPredicted RBP8.63□□□□□ -1.03
CACNA1C-216ENST00000399638 WDR86Q86TI4 376 aa8.63□□□□□ -1.03
CACNA1C-216ENST00000399638 KIR2DL5BQ8NHK3 375 aa8.63□□□□□ -1.03
CACNA1C-216ENST00000399638 FAM215AQ9Y5M1 114 aa8.63□□□□□ -1.03
CACNA1C-216ENST00000399638 WT1P19544 449 aaPredicted RBP8.63□□□□□ -1.03
CACNA1C-216ENST00000399638 Q8TCH9 128 aa8.63□□□□□ -1.03
CACNA1C-216ENST00000399638 PNRC2Q9NPJ4 139 aaKnown RBP8.63□□□□□ -1.03
CACNA1C-216ENST00000399638 Q6P435 159 aa8.63□□□□□ -1.03
CACNA1C-216ENST00000399638 CSPG4Q6UVK1 2322 aa8.63□□□□□ -1.03
CACNA1C-216ENST00000399638 SPINK6Q6UWN8 80 aa8.63□□□□□ -1.03
CACNA1C-216ENST00000399638 ZNF407Q9C0G0 2248 aa8.63□□□□□ -1.03
CACNA1C-216ENST00000399638 K7EQD1 137 aa8.62□□□□□ -1.03
CACNA1C-216ENST00000399638 UBE2D3P61077 147 aa8.62□□□□□ -1.03
CACNA1C-216ENST00000399638 HERVK_113P63121 156 aa8.62□□□□□ -1.03
CACNA1C-216ENST00000399638 PCP2Q8IVA1 136 aa8.62□□□□□ -1.03
CACNA1C-216ENST00000399638 ZNF491Q8N8L2 437 aa8.62□□□□□ -1.03
CACNA1C-216ENST00000399638 C4orf3Q8WVX3 66 aa8.62□□□□□ -1.03
CACNA1C-216ENST00000399638 FREM3P0C091 2139 aa8.62□□□□□ -1.03
CACNA1C-216ENST00000399638 KLK12Q9UKR0 248 aa8.62□□□□□ -1.03
CACNA1C-216ENST00000399638 INSL3P51460 131 aa8.62□□□□□ -1.03
CACNA1C-216ENST00000399638 BLCAPP62952 87 aa8.62□□□□□ -1.03
CACNA1C-216ENST00000399638 PLXNA2O75051 1894 aa8.62□□□□□ -1.03
CACNA1C-216ENST00000399638 SDHAF1A6NFY7 115 aa8.62□□□□□ -1.03
CACNA1C-216ENST00000399638 FSHBP01225 129 aa8.62□□□□□ -1.03
CACNA1C-216ENST00000399638 DEFB131BA0A096LNP1 70 aa8.61□□□□□ -1.03
CACNA1C-216ENST00000399638 TMEM141Q96I45 108 aa8.61□□□□□ -1.03
CACNA1C-216ENST00000399638 GTF3C1Q12789 2109 aa8.61□□□□□ -1.03
CACNA1C-216ENST00000399638 COL4A6Q14031 1691 aa8.61□□□□□ -1.03
CACNA1C-216ENST00000399638 NUP35Q8NFH5 326 aa8.61□□□□□ -1.03
CACNA1C-216ENST00000399638 TP53BP1Q12888 1972 aaPredicted RBP8.61□□□□□ -1.03
CACNA1C-216ENST00000399638 ODF3L1Q8IXM7 274 aa8.61□□□□□ -1.03
CACNA1C-216ENST00000399638 SPANXA1Q9NS26 97 aa8.61□□□□□ -1.03
CACNA1C-216ENST00000399638 NDUFA1O15239 70 aa8.6□□□□□ -1.03
CACNA1C-216ENST00000399638 CRYGDP07320 174 aa8.6□□□□□ -1.03
CACNA1C-216ENST00000399638 PRR15LQ9BU68 103 aa8.6□□□□□ -1.03
CACNA1C-216ENST00000399638 DAND5Q8N907 189 aa8.6□□□□□ -1.03
CACNA1C-216ENST00000399638 NPSP0C0P6 89 aa8.6□□□□□ -1.03
CACNA1C-216ENST00000399638 NTN5Q8WTR8 489 aaPredicted RBP8.6□□□□□ -1.03
CACNA1C-216ENST00000399638 ZNF492Q9P255 531 aa8.59□□□□□ -1.03
CACNA1C-216ENST00000399638 MUC6Q6W4X9 2439 aa8.59□□□□□ -1.03
CACNA1C-216ENST00000399638 IGLC2P0DOY2 106 aa8.59□□□□□ -1.03
CACNA1C-216ENST00000399638 IGLC3P0DOY3 106 aa8.59□□□□□ -1.03
CACNA1C-216ENST00000399638 ZNF833PQ6ZTB9 187 aa8.59□□□□□ -1.03
CACNA1C-216ENST00000399638 PDE6HQ13956 83 aa8.59□□□□□ -1.03
CACNA1C-216ENST00000399638 Q86TA4 180 aa8.59□□□□□ -1.03
CACNA1C-216ENST00000399638 NTF4P34130 210 aa8.59□□□□□ -1.03
CACNA1C-216ENST00000399638 FOXI1Q12951 378 aa8.59□□□□□ -1.03
CACNA1C-216ENST00000399638 Q6ZSR3 168 aa8.59□□□□□ -1.03
CACNA1C-216ENST00000399638 TPSG1Q9NRR2 321 aa8.59□□□□□ -1.03
CACNA1C-216ENST00000399638 SMIM27A0A1W2PRY6 76 aa8.59□□□□□ -1.03
CACNA1C-216ENST00000399638 IGLV3-1P01715 115 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms