RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 ICE1Q9Y2F5 2266 aa6.11□□□□□ -1.43
USP47-203ENST00000399455 SOCS3O14543 225 aa6.11□□□□□ -1.43
USP47-203ENST00000399455 DDTP30046 118 aa6.11□□□□□ -1.43
USP47-203ENST00000399455 TEX22C9J3V5 150 aa6.11□□□□□ -1.43
USP47-203ENST00000399455 ODF3Q96PU9 254 aa6.11□□□□□ -1.43
USP47-203ENST00000399455 TNRC6AQ8NDV7 1962 aaKnown RBP6.11□□□□□ -1.43
USP47-203ENST00000399455 C2orf82Q6UX34 121 aa6.11□□□□□ -1.43
USP47-203ENST00000399455 TMEM61Q8N0U2 210 aa6.11□□□□□ -1.43
USP47-203ENST00000399455 NDUFA12Q9UI09 145 aa6.11□□□□□ -1.43
USP47-203ENST00000399455 PCNX2A6NKB5 2137 aa6.11□□□□□ -1.43
USP47-203ENST00000399455 TRBV24-1A0A075B6N3 115 aa6.11□□□□□ -1.43
USP47-203ENST00000399455 DMRT1Q9Y5R6 373 aa6.11□□□□□ -1.43
USP47-203ENST00000399455 DYSFO75923 2080 aa6.1□□□□□ -1.43
USP47-203ENST00000399455 HLA-DMBP28068 263 aa6.1□□□□□ -1.43
USP47-203ENST00000399455 C21orf62-AS1Q17RA5 79 aa6.1□□□□□ -1.43
USP47-203ENST00000399455 IGLV10-54A0A075B6I4 117 aa6.1□□□□□ -1.43
USP47-203ENST00000399455 SMIM27A0A1W2PRY6 76 aa6.1□□□□□ -1.43
USP47-203ENST00000399455 UBE2D1P51668 147 aa6.1□□□□□ -1.43
USP47-203ENST00000399455 DEFB114Q30KQ6 69 aa6.1□□□□□ -1.43
USP47-203ENST00000399455 ZFP2Q6ZN57 461 aa6.1□□□□□ -1.43
USP47-203ENST00000399455 GTSF1Q8WW33 167 aa6.1□□□□□ -1.43
USP47-203ENST00000399455 MUC22E2RYF6 1773 aaPredicted RBP6.1□□□□□ -1.43
USP47-203ENST00000399455 PTPRSQ13332 1948 aa6.1□□□□□ -1.43
USP47-203ENST00000399455 ZNF407Q9C0G0 2248 aa6.1□□□□□ -1.43
USP47-203ENST00000399455 C9orf153Q5TBE3 101 aa6.1□□□□□ -1.43
USP47-203ENST00000399455 HIST1H4AP62805 103 aaKnown RBP6.1□□□□□ -1.43
USP47-203ENST00000399455 DEFB105AQ8NG35 78 aa6.1□□□□□ -1.43
USP47-203ENST00000399455 ZNF702PQ9H963 129 aa6.1□□□□□ -1.43
USP47-203ENST00000399455 C9JQL5 133 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 H3BUT2 72 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 ZFAND6Q6FIF0 208 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 VSIG2Q96IQ7 327 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 TIMM17AQ99595 171 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 TRAV26-1A0A087WT03 109 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 KIR2DL5BA0A0G2JN68 375 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 KIR2DL5BA0A0G2JPC4 375 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 SYS1-DBNDD2H3BUS1 97 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 BOD1L2Q8IYS8 172 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 KIR2DL5AQ8N109 375 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 C17orf77Q96MU5 243 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 KLK12Q9UKR0 248 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 SAMD5Q5TGI4 173 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 Q8N1Y9 231 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 LINC01006Q8NI28 216 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 COX7B2Q8TF08 81 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 FAM110AQ9BQ89 295 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 FNDC4Q9H6D8 234 aaPredicted RBP6.09□□□□□ -1.43
USP47-203ENST00000399455 EP300Q09472 2414 aaPredicted RBP6.09□□□□□ -1.43
USP47-203ENST00000399455 FAM186AA6NE01 2351 aa6.09□□□□□ -1.43
USP47-203ENST00000399455 NDUFS6O75380 124 aaKnown RBP6.09□□□□□ -1.43
USP47-203ENST00000399455 FGF23Q9GZV9 251 aaPredicted RBP6.09□□□□□ -1.43
USP47-203ENST00000399455 A0A0J9YX75 114 aa6.09□□□□□ -1.44
USP47-203ENST00000399455 NHLRC4P0CG21 123 aaPredicted RBP6.09□□□□□ -1.44
USP47-203ENST00000399455 SRSF3P84103 164 aaKnown RBP6.09□□□□□ -1.44
USP47-203ENST00000399455 HEATR5AQ86XA9 2040 aa6.08□□□□□ -1.44
USP47-203ENST00000399455 PRR20EP86478 221 aa6.08□□□□□ -1.44
USP47-203ENST00000399455 PRR20CP86479 221 aa6.08□□□□□ -1.44
USP47-203ENST00000399455 PRR20DP86480 221 aa6.08□□□□□ -1.44
USP47-203ENST00000399455 PRR20BP86481 221 aa6.08□□□□□ -1.44
USP47-203ENST00000399455 PRR20AP86496 221 aa6.08□□□□□ -1.44
USP47-203ENST00000399455 BVES-AS1Q5T3Y7 98 aa6.08□□□□□ -1.44
USP47-203ENST00000399455 NDUFB1O75438 58 aa6.08□□□□□ -1.44
USP47-203ENST00000399455 IL15RAQ13261 267 aa6.08□□□□□ -1.44
USP47-203ENST00000399455 ZC2HC1BQ5TFG8 222 aa6.08□□□□□ -1.44
USP47-203ENST00000399455 C5orf38Q86SI9 138 aa6.08□□□□□ -1.44
USP47-203ENST00000399455 ZNF664Q8N3J9 261 aa6.08□□□□□ -1.44
USP47-203ENST00000399455 FAM222AQ5U5X8 452 aa6.08□□□□□ -1.44
USP47-203ENST00000399455 TRBV10-1A0A0K0K1A3 114 aa6.08□□□□□ -1.44
USP47-203ENST00000399455 U3KQK5 164 aa6.08□□□□□ -1.44
USP47-203ENST00000399455 PRSS47A8MTI9 375 aa6.07□□□□□ -1.44
USP47-203ENST00000399455 EGR2P11161 476 aaPredicted RBP6.07□□□□□ -1.44
USP47-203ENST00000399455 RNASE13Q5GAN3 156 aaKnown RBP6.07□□□□□ -1.44
USP47-203ENST00000399455 RSPO3Q9BXY4 272 aaPredicted RBP6.07□□□□□ -1.44
USP47-203ENST00000399455 DOCK7Q96N67 2140 aa6.07□□□□□ -1.44
USP47-203ENST00000399455 CCL25O15444 150 aa6.07□□□□□ -1.44
USP47-203ENST00000399455 TRBV12-3P01733 135 aa6.07□□□□□ -1.44
USP47-203ENST00000399455 MPDZO75970 2070 aa6.07□□□□□ -1.44
USP47-203ENST00000399455 H7C423 109 aa6.07□□□□□ -1.44
USP47-203ENST00000399455 A8MWP6 167 aa6.07□□□□□ -1.44
USP47-203ENST00000399455 GAGE2AQ6NT46 116 aa6.07□□□□□ -1.44
USP47-203ENST00000399455 FUSP35637 526 aaKnown RBP eCLIP6.07□□□□□ -1.44
USP47-203ENST00000399455 SPAG11BQ08648 103 aa6.07□□□□□ -1.44
USP47-203ENST00000399455 CNOT1A5YKK6 2376 aaKnown RBP6.06□□□□□ -1.44
USP47-203ENST00000399455 GTSF1LQ9H1H1 148 aa6.06□□□□□ -1.44
USP47-203ENST00000399455 ZNF747Q9BV97 191 aa6.06□□□□□ -1.44
USP47-203ENST00000399455 SIVA1O15304 175 aa6.06□□□□□ -1.44
USP47-203ENST00000399455 C11orf52Q96A22 123 aa6.06□□□□□ -1.44
USP47-203ENST00000399455 GTF3C1Q12789 2109 aa6.06□□□□□ -1.44
USP47-203ENST00000399455 GAGE12HA6NDE8 117 aa6.06□□□□□ -1.44
USP47-203ENST00000399455 LGALS9BQ3B8N2 356 aa6.06□□□□□ -1.44
USP47-203ENST00000399455 LINC00574Q9H8X3 128 aa6.06□□□□□ -1.44
USP47-203ENST00000399455 hADV29S1A0JD25 119 aa6.06□□□□□ -1.44
USP47-203ENST00000399455 WISP2O76076 250 aa6.06□□□□□ -1.44
USP47-203ENST00000399455 C16orf95Q9H693 158 aa6.06□□□□□ -1.44
USP47-203ENST00000399455 KIAA2026Q5HYC2 2103 aa6.05□□□□□ -1.44
USP47-203ENST00000399455 LRP4O75096 1905 aa6.05□□□□□ -1.44
USP47-203ENST00000399455 UNQ9165/PRO28630Q6UXU0 137 aa6.05□□□□□ -1.44
USP47-203ENST00000399455 UBL5Q9BZL1 73 aa6.05□□□□□ -1.44
USP47-203ENST00000399455 LINC01545Q5VT33 79 aa6.05□□□□□ -1.44
USP47-203ENST00000399455 IGKV1-17P01599 117 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms