RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 TET2Q6N021 2002 aaPredicted RBP7.21□□□□□ -1.25
COL28A1-201ENST00000399429 CDX4O14627 284 aaPredicted RBP7.21□□□□□ -1.25
COL28A1-201ENST00000399429 CRLF1O75462 422 aa7.21□□□□□ -1.25
COL28A1-201ENST00000399429 LHBP01229 141 aa7.21□□□□□ -1.25
COL28A1-201ENST00000399429 CGB3P0DN86 165 aa7.21□□□□□ -1.25
COL28A1-201ENST00000399429 CGB7P0DN87 165 aa7.21□□□□□ -1.25
COL28A1-201ENST00000399429 MSMPQ1L6U9 139 aa7.21□□□□□ -1.25
COL28A1-201ENST00000399429 PIFOQ8TCI5 191 aa7.21□□□□□ -1.25
COL28A1-201ENST00000399429 SORL1Q92673 2214 aa7.21□□□□□ -1.25
COL28A1-201ENST00000399429 MRPS12O15235 138 aaKnown RBP7.21□□□□□ -1.25
COL28A1-201ENST00000399429 TOMM6Q96B49 74 aa7.21□□□□□ -1.25
COL28A1-201ENST00000399429 C1orf43Q9BWL3 253 aa7.21□□□□□ -1.25
COL28A1-201ENST00000399429 IGHV3OR16-10A0A075B7F0 116 aa7.21□□□□□ -1.26
COL28A1-201ENST00000399429 A0A0J9YY99 117 aa7.21□□□□□ -1.26
COL28A1-201ENST00000399429 GNRH2O43555 120 aa7.21□□□□□ -1.26
COL28A1-201ENST00000399429 IGLV1-44P01699 117 aa7.21□□□□□ -1.26
COL28A1-201ENST00000399429 IGLC6P0CF74 106 aa7.21□□□□□ -1.26
COL28A1-201ENST00000399429 ICOSQ9Y6W8 199 aa7.21□□□□□ -1.26
COL28A1-201ENST00000399429 TRBV6-1A0A0K0K1D8 114 aa7.21□□□□□ -1.26
COL28A1-201ENST00000399429 INS-IGF2F8WCM5 200 aa7.21□□□□□ -1.26
COL28A1-201ENST00000399429 GATD1Q8NB37 220 aa7.21□□□□□ -1.26
COL28A1-201ENST00000399429 PPDPFQ9H3Y8 114 aa7.21□□□□□ -1.26
COL28A1-201ENST00000399429 LINC00694P0DN24 101 aa7.2□□□□□ -1.26
COL28A1-201ENST00000399429 HERVK_113P63121 156 aa7.2□□□□□ -1.26
COL28A1-201ENST00000399429 PAX8Q06710 450 aa7.2□□□□□ -1.26
COL28A1-201ENST00000399429 LY6G5BQ8NDX9 201 aa7.2□□□□□ -1.26
COL28A1-201ENST00000399429 LINC00477Q96M19 166 aa7.2□□□□□ -1.26
COL28A1-201ENST00000399429 HTTP42858 3142 aa7.2□□□□□ -1.26
COL28A1-201ENST00000399429 IGLV3-9A0A075B6K5 115 aa7.2□□□□□ -1.26
COL28A1-201ENST00000399429 A0A0J9YXV3 536 aa7.2□□□□□ -1.26
COL28A1-201ENST00000399429 CRIP2P52943 208 aaPredicted RBP7.2□□□□□ -1.26
COL28A1-201ENST00000399429 LINC00311Q8N616 119 aa7.2□□□□□ -1.26
COL28A1-201ENST00000399429 AJUBAQ96IF1 538 aa7.2□□□□□ -1.26
COL28A1-201ENST00000399429 RNF5Q99942 180 aa7.2□□□□□ -1.26
COL28A1-201ENST00000399429 NCKAP5O14513 1909 aa7.19□□□□□ -1.26
COL28A1-201ENST00000399429 OVOL1O14753 267 aa7.19□□□□□ -1.26
COL28A1-201ENST00000399429 DAND5Q8N907 189 aa7.19□□□□□ -1.26
COL28A1-201ENST00000399429 CHD7Q9P2D1 2997 aa7.19□□□□□ -1.26
COL28A1-201ENST00000399429 IGHV3OR16-12A0A075B7B8 117 aa7.19□□□□□ -1.26
COL28A1-201ENST00000399429 A0A1B0GX51 115 aa7.19□□□□□ -1.26
COL28A1-201ENST00000399429 OOSP1A8MZH6 123 aa7.19□□□□□ -1.26
COL28A1-201ENST00000399429 PRSS33Q8NF86 280 aa7.19□□□□□ -1.26
COL28A1-201ENST00000399429 IGKV3D-7A0A0C4DH55 119 aa7.19□□□□□ -1.26
COL28A1-201ENST00000399429 TEX22C9J3V5 150 aa7.19□□□□□ -1.26
COL28A1-201ENST00000399429 INAFM2P0DMQ5 153 aa7.19□□□□□ -1.26
COL28A1-201ENST00000399429 SMCPP49901 116 aaPredicted RBP7.19□□□□□ -1.26
COL28A1-201ENST00000399429 LY6EQ16553 131 aa7.19□□□□□ -1.26
COL28A1-201ENST00000399429 Q6ZS46 218 aa7.19□□□□□ -1.26
COL28A1-201ENST00000399429 C9orf139Q6ZV77 190 aa7.19□□□□□ -1.26
COL28A1-201ENST00000399429 PIP4P2Q8N4L2 257 aa7.19□□□□□ -1.26
COL28A1-201ENST00000399429 OPRPNQ99935 248 aaPredicted RBP7.19□□□□□ -1.26
COL28A1-201ENST00000399429 SONP18583 2426 aaKnown RBP7.19□□□□□ -1.26
COL28A1-201ENST00000399429 NEXN-AS1Q8NBZ9 246 aa7.18□□□□□ -1.26
COL28A1-201ENST00000399429 M0R1W7 72 aa7.18□□□□□ -1.26
COL28A1-201ENST00000399429 LY6HO94772 140 aa7.18□□□□□ -1.26
COL28A1-201ENST00000399429 UBE2E1P51965 193 aa7.18□□□□□ -1.26
COL28A1-201ENST00000399429 PRO0461Q9UI25 63 aa7.18□□□□□ -1.26
COL28A1-201ENST00000399429 BAALC-AS2P0C853 105 aa7.18□□□□□ -1.26
COL28A1-201ENST00000399429 Q6ZS92 163 aa7.18□□□□□ -1.26
COL28A1-201ENST00000399429 SLC25A29Q8N8R3 303 aa7.18□□□□□ -1.26
COL28A1-201ENST00000399429 LINC01560Q8TB33 94 aa7.18□□□□□ -1.26
COL28A1-201ENST00000399429 LINC01548A6NM66 108 aa7.18□□□□□ -1.26
COL28A1-201ENST00000399429 B9A039 149 aa7.18□□□□□ -1.26
COL28A1-201ENST00000399429 F6UB75 175 aa7.18□□□□□ -1.26
COL28A1-201ENST00000399429 IGHV3-33P01772 117 aa7.18□□□□□ -1.26
COL28A1-201ENST00000399429 PRIMA1Q86XR5 153 aa7.18□□□□□ -1.26
COL28A1-201ENST00000399429 LGALS9O00182 355 aa7.17□□□□□ -1.26
COL28A1-201ENST00000399429 SYNJ2BPP57105 145 aa7.17□□□□□ -1.26
COL28A1-201ENST00000399429 RASL10AQ92737 203 aa7.17□□□□□ -1.26
COL28A1-201ENST00000399429 PEMTQ9UBM1 199 aa7.17□□□□□ -1.26
COL28A1-201ENST00000399429 CTSZQ9UBR2 303 aa7.17□□□□□ -1.26
COL28A1-201ENST00000399429 CENPVL3A0A0U1RRI6 287 aa7.17□□□□□ -1.26
COL28A1-201ENST00000399429 H3BT86 120 aa7.17□□□□□ -1.26
COL28A1-201ENST00000399429 CCL21O00585 134 aa7.17□□□□□ -1.26
COL28A1-201ENST00000399429 UQCRQO14949 82 aa7.17□□□□□ -1.26
COL28A1-201ENST00000399429 LEPROTO15243 131 aa7.17□□□□□ -1.26
COL28A1-201ENST00000399429 LOC107984640A0A0U1RRK4 108 aa7.17□□□□□ -1.26
COL28A1-201ENST00000399429 ACYP1P07311 99 aa7.17□□□□□ -1.26
COL28A1-201ENST00000399429 ZMAT4Q9H898 229 aa7.17□□□□□ -1.26
COL28A1-201ENST00000399429 MUC22E2RYF6 1773 aaPredicted RBP7.16□□□□□ -1.26
COL28A1-201ENST00000399429 G3V318 75 aa7.16□□□□□ -1.26
COL28A1-201ENST00000399429 NDUFA7O95182 113 aa7.16□□□□□ -1.26
COL28A1-201ENST00000399429 DEFB1P60022 68 aa7.16□□□□□ -1.26
COL28A1-201ENST00000399429 SNRPD3P62318 126 aaKnown RBP7.16□□□□□ -1.26
COL28A1-201ENST00000399429 VPREB3Q9UKI3 123 aa7.16□□□□□ -1.26
COL28A1-201ENST00000399429 TNRC6BQ9UPQ9 1833 aaKnown RBP7.16□□□□□ -1.26
COL28A1-201ENST00000399429 TINCRA0A1B0GVN0 87 aa7.16□□□□□ -1.26
COL28A1-201ENST00000399429 hADV29S1A0JD25 119 aa7.16□□□□□ -1.26
COL28A1-201ENST00000399429 TRIAP1O43715 76 aa7.16□□□□□ -1.26
COL28A1-201ENST00000399429 WISP2O76076 250 aa7.16□□□□□ -1.26
COL28A1-201ENST00000399429 CRPP02741 224 aa7.16□□□□□ -1.26
COL28A1-201ENST00000399429 C3orf22Q8N5N4 141 aa7.16□□□□□ -1.26
COL28A1-201ENST00000399429 MOB4Q9Y3A3 225 aa7.16□□□□□ -1.26
COL28A1-201ENST00000399429 UBE2L6O14933 153 aa7.16□□□□□ -1.26
COL28A1-201ENST00000399429 HOXD3P31249 432 aaPredicted RBP7.16□□□□□ -1.26
COL28A1-201ENST00000399429 IGHV1-69DA0A0B4J2H0 117 aa7.15□□□□□ -1.26
COL28A1-201ENST00000399429 KNCNA6PVL3 124 aa7.15□□□□□ -1.26
COL28A1-201ENST00000399429 IGHV3-30P01768 117 aa7.15□□□□□ -1.26
COL28A1-201ENST00000399429 IGHV3-30-5P0DP03 117 aa7.15□□□□□ -1.26
COL28A1-201ENST00000399429 CD59P13987 128 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms