RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 IGKV1D-37A0A075B6S9 117 aa11.39□□□□□ -0.59
RPRD1A-202ENST00000399022 CFC1BP0CG36 223 aa11.39□□□□□ -0.59
RPRD1A-202ENST00000399022 CFC1P0CG37 223 aa11.39□□□□□ -0.59
RPRD1A-202ENST00000399022 DYNAPQ8N1N2 210 aa11.39□□□□□ -0.59
RPRD1A-202ENST00000399022 URB1-AS1Q96HZ7 61 aa11.39□□□□□ -0.59
RPRD1A-202ENST00000399022 DUX5Q96PT3 197 aa11.39□□□□□ -0.59
RPRD1A-202ENST00000399022 CGB3P0DN86 165 aa11.39□□□□□ -0.59
RPRD1A-202ENST00000399022 CGB7P0DN87 165 aa11.39□□□□□ -0.59
RPRD1A-202ENST00000399022 XIRP2A4UGR9 3374 aa11.39□□□□□ -0.59
RPRD1A-202ENST00000399022 HERV-K104P63124 156 aa11.39□□□□□ -0.59
RPRD1A-202ENST00000399022 UFSP1Q6NVU6 142 aa11.38□□□□□ -0.59
RPRD1A-202ENST00000399022 C9orf139Q6ZV77 190 aa11.38□□□□□ -0.59
RPRD1A-202ENST00000399022 CFHR4Q92496 578 aa11.38□□□□□ -0.59
RPRD1A-202ENST00000399022 IGF2-ASQ6U949 168 aa11.38□□□□□ -0.59
RPRD1A-202ENST00000399022 LINC00477Q96M19 166 aa11.38□□□□□ -0.59
RPRD1A-202ENST00000399022 CR1LQ2VPA4 569 aa11.38□□□□□ -0.59
RPRD1A-202ENST00000399022 Q8NA96 180 aa11.38□□□□□ -0.59
RPRD1A-202ENST00000399022 TLN2Q9Y4G6 2542 aa11.38□□□□□ -0.59
RPRD1A-202ENST00000399022 UBE2L6O14933 153 aa11.38□□□□□ -0.59
RPRD1A-202ENST00000399022 INSL3P51460 131 aa11.37□□□□□ -0.59
RPRD1A-202ENST00000399022 GAGE2AQ6NT46 116 aa11.37□□□□□ -0.59
RPRD1A-202ENST00000399022 SONP18583 2426 aaKnown RBP11.37□□□□□ -0.59
RPRD1A-202ENST00000399022 IGHV3-73A0A0B4J1V6 119 aa11.37□□□□□ -0.59
RPRD1A-202ENST00000399022 ADARB2-AS1A8MUL3 147 aa11.37□□□□□ -0.59
RPRD1A-202ENST00000399022 ZNF625Q96I27 306 aaPredicted RBP11.37□□□□□ -0.59
RPRD1A-202ENST00000399022 MYO18BQ8IUG5 2567 aa11.37□□□□□ -0.59
RPRD1A-202ENST00000399022 CARD19Q96LW7 228 aa11.37□□□□□ -0.59
RPRD1A-202ENST00000399022 SDHAF1A6NFY7 115 aa11.36□□□□□ -0.59
RPRD1A-202ENST00000399022 C11orf44Q8N8P7 122 aa11.36□□□□□ -0.59
RPRD1A-202ENST00000399022 MAPK1IP1LQ8NDC0 245 aa11.36□□□□□ -0.59
RPRD1A-202ENST00000399022 TM2D2Q9BX73 214 aa11.36□□□□□ -0.59
RPRD1A-202ENST00000399022 AGPAT4-IT1Q9H0P7 198 aa11.36□□□□□ -0.59
RPRD1A-202ENST00000399022 ATG2AQ2TAZ0 1938 aa11.36□□□□□ -0.59
RPRD1A-202ENST00000399022 HIST1H4AP62805 103 aaKnown RBP11.36□□□□□ -0.59
RPRD1A-202ENST00000399022 C1orf159Q96HA4 380 aa11.36□□□□□ -0.59
RPRD1A-202ENST00000399022 SORL1Q92673 2214 aa11.36□□□□□ -0.59
RPRD1A-202ENST00000399022 NAV2Q8IVL1 2488 aa11.35□□□□□ -0.59
RPRD1A-202ENST00000399022 UBE2E1P51965 193 aa11.35□□□□□ -0.59
RPRD1A-202ENST00000399022 ZFP2Q6ZN57 461 aa11.35□□□□□ -0.59
RPRD1A-202ENST00000399022 EXPH5Q8NEV8 1989 aa11.35□□□□□ -0.59
RPRD1A-202ENST00000399022 A4D1N5 150 aa11.35□□□□□ -0.59
RPRD1A-202ENST00000399022 FOXE3Q13461 319 aa11.35□□□□□ -0.59
RPRD1A-202ENST00000399022 ZNF493Q6ZR52 646 aa11.35□□□□□ -0.59
RPRD1A-202ENST00000399022 USP9YO00507 2555 aaPredicted RBP11.34□□□□□ -0.59
RPRD1A-202ENST00000399022 RPL39LQ96EH5 51 aaKnown RBP11.34□□□□□ -0.59
RPRD1A-202ENST00000399022 C16orf54Q6UWD8 224 aa11.34□□□□□ -0.59
RPRD1A-202ENST00000399022 MAPKAPK5-AS1Q8N8E1 139 aa11.34□□□□□ -0.59
RPRD1A-202ENST00000399022 ATP6V0E2Q8NHE4 81 aa11.34□□□□□ -0.59
RPRD1A-202ENST00000399022 LGALS1P09382 135 aaKnown RBP11.34□□□□□ -0.59
RPRD1A-202ENST00000399022 DUX3Q96PT4 197 aa11.34□□□□□ -0.59
RPRD1A-202ENST00000399022 I3L2K1 104 aa11.33□□□□□ -0.6
RPRD1A-202ENST00000399022 IGLV2-23P01705 113 aa11.33□□□□□ -0.6
RPRD1A-202ENST00000399022 TMEM141Q96I45 108 aa11.33□□□□□ -0.6
RPRD1A-202ENST00000399022 A0A1W2PRX2 142 aa11.33□□□□□ -0.6
RPRD1A-202ENST00000399022 K7EIM0 57 aa11.33□□□□□ -0.6
RPRD1A-202ENST00000399022 OVOL3O00110 214 aa11.33□□□□□ -0.6
RPRD1A-202ENST00000399022 TRBV7-1A0A0A6YYK4 115 aa11.33□□□□□ -0.6
RPRD1A-202ENST00000399022 C8orf31Q8N9H6 132 aa11.33□□□□□ -0.6
RPRD1A-202ENST00000399022 LY6G5BQ8NDX9 201 aa11.33□□□□□ -0.6
RPRD1A-202ENST00000399022 SETD2Q9BYW2 2564 aaPredicted RBP11.33□□□□□ -0.6
RPRD1A-202ENST00000399022 IGLV1-47P01700 117 aa11.32□□□□□ -0.6
RPRD1A-202ENST00000399022 FAM110DQ8TAY7 271 aaPredicted RBP11.32□□□□□ -0.6
RPRD1A-202ENST00000399022 ITLN2Q8WWU7 325 aaPredicted RBP11.32□□□□□ -0.6
RPRD1A-202ENST00000399022 NACAE9PAV3 2078 aa11.32□□□□□ -0.6
RPRD1A-202ENST00000399022 DUSP14O95147 198 aaKnown RBP11.32□□□□□ -0.6
RPRD1A-202ENST00000399022 RS1O15537 224 aa11.32□□□□□ -0.6
RPRD1A-202ENST00000399022 LINC01620Q4KN68 170 aa11.32□□□□□ -0.6
RPRD1A-202ENST00000399022 MORN3Q6PF18 240 aaPredicted RBP11.31□□□□□ -0.6
RPRD1A-202ENST00000399022 TRPT1Q86TN4 253 aaKnown RBP11.31□□□□□ -0.6
RPRD1A-202ENST00000399022 RHPN1-AS1Q9BWJ2 59 aa11.31□□□□□ -0.6
RPRD1A-202ENST00000399022 NDUFA12Q9UI09 145 aa11.31□□□□□ -0.6
RPRD1A-202ENST00000399022 ABCA2Q9BZC7 2435 aa11.31□□□□□ -0.6
RPRD1A-202ENST00000399022 TCL1BO95988 128 aa11.31□□□□□ -0.6
RPRD1A-202ENST00000399022 SPATA25Q9BR10 227 aa11.31□□□□□ -0.6
RPRD1A-202ENST00000399022 USP9XQ93008 2570 aaPredicted RBP11.31□□□□□ -0.6
RPRD1A-202ENST00000399022 COL5A1P20908 1838 aaPredicted RBP11.3□□□□□ -0.6
RPRD1A-202ENST00000399022 DSCAMO60469 2012 aa11.3□□□□□ -0.6
RPRD1A-202ENST00000399022 B4DSR2 109 aa11.3□□□□□ -0.6
RPRD1A-202ENST00000399022 INS-IGF2F8WCM5 200 aa11.3□□□□□ -0.6
RPRD1A-202ENST00000399022 CRYGCP07315 174 aa11.3□□□□□ -0.6
RPRD1A-202ENST00000399022 CFAP54Q96N23 3096 aa11.3□□□□□ -0.6
RPRD1A-202ENST00000399022 PRAC2D3DTV9 90 aa11.29□□□□□ -0.6
RPRD1A-202ENST00000399022 NDUFV3P56181 108 aaKnown RBP11.29□□□□□ -0.6
RPRD1A-202ENST00000399022 ADORA2A-AS1P86434 159 aa11.29□□□□□ -0.6
RPRD1A-202ENST00000399022 MYCNOSP40205 109 aa11.29□□□□□ -0.6
RPRD1A-202ENST00000399022 ZNF80P51504 273 aaPredicted RBP11.29□□□□□ -0.6
RPRD1A-202ENST00000399022 GATD1Q8NB37 220 aa11.29□□□□□ -0.6
RPRD1A-202ENST00000399022 TEX22C9J3V5 150 aa11.28□□□□□ -0.6
RPRD1A-202ENST00000399022 MUSTN1Q8IVN3 82 aa11.28□□□□□ -0.6
RPRD1A-202ENST00000399022 HIVEP3Q5T1R4 2406 aa11.28□□□□□ -0.6
RPRD1A-202ENST00000399022 FAM236AA0A1B0GUQ0 79 aa11.28□□□□□ -0.6
RPRD1A-202ENST00000399022 FAM236BA0A1B0GV22 79 aa11.28□□□□□ -0.6
RPRD1A-202ENST00000399022 CRIP1P50238 77 aa11.28□□□□□ -0.6
RPRD1A-202ENST00000399022 XGP55808 180 aa11.28□□□□□ -0.6
RPRD1A-202ENST00000399022 IGHV1-69DA0A0B4J2H0 117 aa11.28□□□□□ -0.6
RPRD1A-202ENST00000399022 IGHV1-69P01742 117 aa11.28□□□□□ -0.6
RPRD1A-202ENST00000399022 PRIMA1Q86XR5 153 aa11.28□□□□□ -0.6
RPRD1A-202ENST00000399022 NDUFA11Q86Y39 141 aa11.28□□□□□ -0.6
RPRD1A-202ENST00000399022 GNRH2O43555 120 aa11.27□□□□□ -0.6
RPRD1A-202ENST00000399022 CFAP161Q6P656 301 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms