RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 C2orf88Q9BSF0 95 aa5.44□□□□□ -1.54
RGPD1-201ENST00000398193 ZMAT4Q9H898 229 aa5.44□□□□□ -1.54
RGPD1-201ENST00000398193 PRRC2CQ9Y520 2896 aaKnown RBP5.44□□□□□ -1.54
RGPD1-201ENST00000398193 RHODO00212 210 aa5.44□□□□□ -1.54
RGPD1-201ENST00000398193 TMEM141Q96I45 108 aa5.44□□□□□ -1.54
RGPD1-201ENST00000398193 IGKV3-7A0A075B6H7 116 aa5.44□□□□□ -1.54
RGPD1-201ENST00000398193 LOC389332A0A1B0GUA5 103 aa5.44□□□□□ -1.54
RGPD1-201ENST00000398193 IFI27L1Q96BM0 104 aa5.44□□□□□ -1.54
RGPD1-201ENST00000398193 C14orf144Q96I85 54 aa5.44□□□□□ -1.54
RGPD1-201ENST00000398193 ANK3Q12955 4377 aaKnown RBP5.44□□□□□ -1.54
RGPD1-201ENST00000398193 VCYO14598 125 aa5.43□□□□□ -1.54
RGPD1-201ENST00000398193 DLEU1O43261 78 aa5.43□□□□□ -1.54
RGPD1-201ENST00000398193 MUC21Q5SSG8 566 aa5.43□□□□□ -1.54
RGPD1-201ENST00000398193 MCRIP2Q9BUT9 160 aaKnown RBP5.43□□□□□ -1.54
RGPD1-201ENST00000398193 C1QTNF4Q9BXJ3 329 aa5.43□□□□□ -1.54
RGPD1-201ENST00000398193 PRO1933Q9H354 126 aa5.43□□□□□ -1.54
RGPD1-201ENST00000398193 RIPPLY3P57055 190 aa5.43□□□□□ -1.54
RGPD1-201ENST00000398193 STHQ8IWL8 128 aa5.43□□□□□ -1.54
RGPD1-201ENST00000398193 Q8N1Y9 231 aa5.43□□□□□ -1.54
RGPD1-201ENST00000398193 ROS1P08922 2347 aa5.43□□□□□ -1.54
RGPD1-201ENST00000398193 KNCNA6PVL3 124 aa5.43□□□□□ -1.54
RGPD1-201ENST00000398193 SMKR1H3BMG3 65 aa5.43□□□□□ -1.54
RGPD1-201ENST00000398193 CRLF1O75462 422 aa5.43□□□□□ -1.54
RGPD1-201ENST00000398193 NCR2O95944 276 aa5.43□□□□□ -1.54
RGPD1-201ENST00000398193 IGLC3P0DOY3 106 aa5.43□□□□□ -1.54
RGPD1-201ENST00000398193 UFSP1Q6NVU6 142 aa5.43□□□□□ -1.54
RGPD1-201ENST00000398193 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.43□□□□□ -1.54
RGPD1-201ENST00000398193 CBY3A6NI87 242 aa5.43□□□□□ -1.54
RGPD1-201ENST00000398193 SPINK13Q1W4C9 94 aa5.43□□□□□ -1.54
RGPD1-201ENST00000398193 M0R143 59 aa5.42□□□□□ -1.54
RGPD1-201ENST00000398193 SIVA1O15304 175 aa5.42□□□□□ -1.54
RGPD1-201ENST00000398193 SUMO4Q6EEV6 95 aa5.42□□□□□ -1.54
RGPD1-201ENST00000398193 ZNF705AQ6ZN79 300 aaPredicted RBP5.42□□□□□ -1.54
RGPD1-201ENST00000398193 RBMY1BA6NDE4 496 aaKnown RBP5.42□□□□□ -1.54
RGPD1-201ENST00000398193 RBMY1EA6NEQ0 496 aaKnown RBP5.42□□□□□ -1.54
RGPD1-201ENST00000398193 RS1O15537 224 aa5.42□□□□□ -1.54
RGPD1-201ENST00000398193 RBMY1DP0C7P1 496 aaKnown RBP5.42□□□□□ -1.54
RGPD1-201ENST00000398193 GOLT1BQ9Y3E0 138 aa5.42□□□□□ -1.54
RGPD1-201ENST00000398193 PRB4P10163 310 aaPredicted RBP5.42□□□□□ -1.54
RGPD1-201ENST00000398193 NSUN5P1Q3KNT7 163 aa5.42□□□□□ -1.54
RGPD1-201ENST00000398193 MAP1BP46821 2468 aaKnown RBP5.42□□□□□ -1.54
RGPD1-201ENST00000398193 SPTBN2O15020 2390 aa5.42□□□□□ -1.54
RGPD1-201ENST00000398193 MUC21A0A0G2JKD1 596 aa5.42□□□□□ -1.54
RGPD1-201ENST00000398193 MUC21A0A140T8X8 626 aa5.42□□□□□ -1.54
RGPD1-201ENST00000398193 J3KRW8 73 aa5.42□□□□□ -1.54
RGPD1-201ENST00000398193 MGPP08493 103 aa5.42□□□□□ -1.54
RGPD1-201ENST00000398193 Q6ZQT7 251 aa5.42□□□□□ -1.54
RGPD1-201ENST00000398193 C14orf178Q8N769 122 aaPredicted RBP5.42□□□□□ -1.54
RGPD1-201ENST00000398193 LINC00482Q8N8I6 264 aa5.42□□□□□ -1.54
RGPD1-201ENST00000398193 DUX3Q96PT4 197 aa5.42□□□□□ -1.54
RGPD1-201ENST00000398193 ADGRG4Q8IZF6 3080 aa5.42□□□□□ -1.54
RGPD1-201ENST00000398193 CACNA1BQ00975 2339 aa5.42□□□□□ -1.54
RGPD1-201ENST00000398193 TRBV27A0A0K0K1C4 114 aa5.41□□□□□ -1.54
RGPD1-201ENST00000398193 CD33P20138 364 aa5.41□□□□□ -1.54
RGPD1-201ENST00000398193 POLR2KP53803 58 aaKnown RBP5.41□□□□□ -1.54
RGPD1-201ENST00000398193 ODF3L2Q3SX64 289 aa5.41□□□□□ -1.54
RGPD1-201ENST00000398193 BOD1L2Q8IYS8 172 aa5.41□□□□□ -1.54
RGPD1-201ENST00000398193 CRYBA4P53673 196 aa5.41□□□□□ -1.54
RGPD1-201ENST00000398193 DEFB1P60022 68 aa5.41□□□□□ -1.54
RGPD1-201ENST00000398193 C9orf66Q5T8R8 295 aa5.41□□□□□ -1.54
RGPD1-201ENST00000398193 PLNP26678 52 aa5.41□□□□□ -1.54
RGPD1-201ENST00000398193 TMEM158Q8WZ71 300 aa5.41□□□□□ -1.54
RGPD1-201ENST00000398193 PAM16Q9Y3D7 125 aa5.41□□□□□ -1.54
RGPD1-201ENST00000398193 NBEAQ8NFP9 2946 aa5.41□□□□□ -1.54
RGPD1-201ENST00000398193 CRYGDP07320 174 aa5.41□□□□□ -1.54
RGPD1-201ENST00000398193 TIMM8BQ9Y5J9 83 aaPredicted RBP5.41□□□□□ -1.54
RGPD1-201ENST00000398193 ZZEF1O43149 2961 aa5.41□□□□□ -1.54
RGPD1-201ENST00000398193 SPTA1P02549 2419 aa5.41□□□□□ -1.54
RGPD1-201ENST00000398193 NUDT3O95989 172 aa5.41□□□□□ -1.54
RGPD1-201ENST00000398193 PAPPA-AS1Q5QFB9 102 aa5.41□□□□□ -1.54
RGPD1-201ENST00000398193 C11orf72Q8NBR9 251 aa5.41□□□□□ -1.54
RGPD1-201ENST00000398193 A0A087WX48 190 aa5.4□□□□□ -1.54
RGPD1-201ENST00000398193 M0QY20 66 aa5.4□□□□□ -1.54
RGPD1-201ENST00000398193 SAP30O75446 220 aa5.4□□□□□ -1.54
RGPD1-201ENST00000398193 TIMM17AQ99595 171 aa5.4□□□□□ -1.54
RGPD1-201ENST00000398193 KIR2DL4Q99706 377 aa5.4□□□□□ -1.54
RGPD1-201ENST00000398193 DCHS2Q6V1P9 2916 aa5.4□□□□□ -1.54
RGPD1-201ENST00000398193 LINC00173Q6ZV60 143 aa5.4□□□□□ -1.54
RGPD1-201ENST00000398193 C16orf74Q96GX8 76 aa5.4□□□□□ -1.54
RGPD1-201ENST00000398193 TRAV12-2A0A075B6T6 113 aa5.4□□□□□ -1.55
RGPD1-201ENST00000398193 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.4□□□□□ -1.55
RGPD1-201ENST00000398193 RBMY1A1P0DJD3 496 aaKnown RBP5.4□□□□□ -1.55
RGPD1-201ENST00000398193 RBMY1CP0DJD4 496 aa5.4□□□□□ -1.55
RGPD1-201ENST00000398193 HNRNPA3P51991 378 aaKnown RBP5.4□□□□□ -1.55
RGPD1-201ENST00000398193 RBMY1FQ15415 496 aaKnown RBP5.4□□□□□ -1.55
RGPD1-201ENST00000398193 LURAP1LQ8IV03 231 aa5.4□□□□□ -1.55
RGPD1-201ENST00000398193 LINC01587Q99440 93 aa5.4□□□□□ -1.55
RGPD1-201ENST00000398193 MDFICQ9P1T7 246 aa5.4□□□□□ -1.55
RGPD1-201ENST00000398193 CFAP46Q8IYW2 2715 aa5.4□□□□□ -1.55
RGPD1-201ENST00000398193 I3L3M4 83 aa5.4□□□□□ -1.55
RGPD1-201ENST00000398193 COX8AP10176 69 aa5.4□□□□□ -1.55
RGPD1-201ENST00000398193 CSTL1Q9H114 145 aa5.4□□□□□ -1.55
RGPD1-201ENST00000398193 CHD8Q9HCK8 2581 aa5.4□□□□□ -1.55
RGPD1-201ENST00000398193 TRAV26-2A0A0B4J265 109 aa5.39□□□□□ -1.55
RGPD1-201ENST00000398193 DPM2O94777 84 aa5.39□□□□□ -1.55
RGPD1-201ENST00000398193 DAZ2Q13117 558 aaKnown RBP5.39□□□□□ -1.55
RGPD1-201ENST00000398193 TMEM263Q8WUH6 116 aaKnown RBP5.39□□□□□ -1.55
RGPD1-201ENST00000398193 A0A1W2PRX2 142 aa5.39□□□□□ -1.55
RGPD1-201ENST00000398193 IGKCP01834 107 aa5.39□□□□□ -1.55
RGPD1-201ENST00000398193 IGLL1P15814 213 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms