RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 MRPL51Q4U2R6 128 aaKnown RBP11.05□□□□□ -0.64
CAPN3-207ENST00000397200 AMN1Q8IY45 258 aa11.05□□□□□ -0.64
CAPN3-207ENST00000397200 ZMAT5Q9UDW3 170 aaKnown RBP11.05□□□□□ -0.64
CAPN3-207ENST00000397200 SORL1Q92673 2214 aa11.05□□□□□ -0.64
CAPN3-207ENST00000397200 G3V4G9 280 aa11.04□□□□□ -0.64
CAPN3-207ENST00000397200 PSMG4Q5JS54 123 aa11.04□□□□□ -0.64
CAPN3-207ENST00000397200 SAMD5Q5TGI4 173 aa11.04□□□□□ -0.64
CAPN3-207ENST00000397200 CMC4P56277 68 aaPredicted RBP11.03□□□□□ -0.64
CAPN3-207ENST00000397200 TWIST1Q15672 202 aa11.03□□□□□ -0.64
CAPN3-207ENST00000397200 EBLN2Q6P2I7 272 aa11.03□□□□□ -0.64
CAPN3-207ENST00000397200 GTSCR1Q86UQ5 136 aa11.03□□□□□ -0.64
CAPN3-207ENST00000397200 ORMDL3Q8N138 153 aa11.03□□□□□ -0.64
CAPN3-207ENST00000397200 RNF185Q96GF1 192 aa11.03□□□□□ -0.64
CAPN3-207ENST00000397200 C20orf144Q9BQM9 153 aa11.03□□□□□ -0.64
CAPN3-207ENST00000397200 TRAV21A0A0B4J279 112 aa11.02□□□□□ -0.64
CAPN3-207ENST00000397200 D6R8Y8 96 aa11.02□□□□□ -0.64
CAPN3-207ENST00000397200 EGFEM1PQ0D2K5 195 aa11.02□□□□□ -0.64
CAPN3-207ENST00000397200 ODF3Q96PU9 254 aa11.02□□□□□ -0.64
CAPN3-207ENST00000397200 MAP6D1Q9H9H5 199 aa11.02□□□□□ -0.64
CAPN3-207ENST00000397200 OR11H12B2RN74 326 aa11.02□□□□□ -0.65
CAPN3-207ENST00000397200 CRXO43186 299 aaPredicted RBP11.02□□□□□ -0.65
CAPN3-207ENST00000397200 CD7P09564 240 aa11.02□□□□□ -0.65
CAPN3-207ENST00000397200 MED14OSP0DP75 135 aa11.02□□□□□ -0.65
CAPN3-207ENST00000397200 DEFB131AP59861 70 aa11.02□□□□□ -0.65
CAPN3-207ENST00000397200 DEFB1P60022 68 aa11.02□□□□□ -0.65
CAPN3-207ENST00000397200 Q6ZQT7 251 aa11.02□□□□□ -0.65
CAPN3-207ENST00000397200 PRELID3AQ96N28 172 aa11.02□□□□□ -0.65
CAPN3-207ENST00000397200 DNHD1Q96M86 4753 aa11.01□□□□□ -0.65
CAPN3-207ENST00000397200 MUC21A0A0G2JKD1 596 aa11.01□□□□□ -0.65
CAPN3-207ENST00000397200 MUC21A0A140T8X8 626 aa11.01□□□□□ -0.65
CAPN3-207ENST00000397200 KLLNB2CW77 178 aa11.01□□□□□ -0.65
CAPN3-207ENST00000397200 F6UB75 175 aa11.01□□□□□ -0.65
CAPN3-207ENST00000397200 PPBPP02775 128 aa11.01□□□□□ -0.65
CAPN3-207ENST00000397200 BTF3P20290 206 aaKnown RBP11.01□□□□□ -0.65
CAPN3-207ENST00000397200 CACNG7P62955 275 aa11.01□□□□□ -0.65
CAPN3-207ENST00000397200 ODF3L2Q3SX64 289 aa11.01□□□□□ -0.65
CAPN3-207ENST00000397200 MUC21Q5SSG8 566 aa11.01□□□□□ -0.65
CAPN3-207ENST00000397200 C14orf144Q96I85 54 aa11.01□□□□□ -0.65
CAPN3-207ENST00000397200 NDUFAF3Q9BU61 184 aa11.01□□□□□ -0.65
CAPN3-207ENST00000397200 MSRB1Q9NZV6 116 aa11.01□□□□□ -0.65
CAPN3-207ENST00000397200 LAMTOR2Q9Y2Q5 125 aa11.01□□□□□ -0.65
CAPN3-207ENST00000397200 KRTAP10-11P60412 298 aa11□□□□□ -0.65
CAPN3-207ENST00000397200 DEFA6Q01524 100 aa11□□□□□ -0.65
CAPN3-207ENST00000397200 FAM110AQ9BQ89 295 aa11□□□□□ -0.65
CAPN3-207ENST00000397200 VAMP8Q9BV40 100 aa11□□□□□ -0.65
CAPN3-207ENST00000397200 AP5S1Q9NUS5 200 aa11□□□□□ -0.65
CAPN3-207ENST00000397200 TDRG1Q3Y452 100 aa10.99□□□□□ -0.65
CAPN3-207ENST00000397200 OR10AG1Q8NH19 301 aa10.99□□□□□ -0.65
CAPN3-207ENST00000397200 LINC01546A6NGU7 62 aa10.98□□□□□ -0.65
CAPN3-207ENST00000397200 LEPROTL1O95214 131 aa10.98□□□□□ -0.65
CAPN3-207ENST00000397200 PMCHL1Q16048 86 aa10.98□□□□□ -0.65
CAPN3-207ENST00000397200 SCRT2Q9NQ03 307 aa10.98□□□□□ -0.65
CAPN3-207ENST00000397200 NPYP01303 97 aa10.98□□□□□ -0.65
CAPN3-207ENST00000397200 CKS2P33552 79 aa10.98□□□□□ -0.65
CAPN3-207ENST00000397200 FOXI2Q6ZQN5 318 aa10.98□□□□□ -0.65
CAPN3-207ENST00000397200 FA2HQ7L5A8 372 aa10.98□□□□□ -0.65
CAPN3-207ENST00000397200 TMEM70Q9BUB7 260 aa10.98□□□□□ -0.65
CAPN3-207ENST00000397200 C19orf73Q9NVV2 129 aa10.98□□□□□ -0.65
CAPN3-207ENST00000397200 A0A096LNJ9 63 aa10.97□□□□□ -0.65
CAPN3-207ENST00000397200 A0A0J9YX75 114 aa10.97□□□□□ -0.65
CAPN3-207ENST00000397200 IFI27P40305 119 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-207ENST00000397200 ZNF124Q15973 351 aa10.97□□□□□ -0.65
CAPN3-207ENST00000397200 DEFB125Q8N687 156 aa10.97□□□□□ -0.65
CAPN3-207ENST00000397200 PRSS3P2Q8NHM4 247 aa10.97□□□□□ -0.65
CAPN3-207ENST00000397200 WFDC10AQ9H1F0 79 aa10.97□□□□□ -0.65
CAPN3-207ENST00000397200 MGAM2Q2M2H8 2515 aa10.97□□□□□ -0.65
CAPN3-207ENST00000397200 KNCNA6PVL3 124 aa10.96□□□□□ -0.65
CAPN3-207ENST00000397200 H3BVH4 76 aa10.96□□□□□ -0.65
CAPN3-207ENST00000397200 SSTP61278 116 aa10.96□□□□□ -0.65
CAPN3-207ENST00000397200 LINC00173Q6ZV60 143 aa10.96□□□□□ -0.65
CAPN3-207ENST00000397200 SPATA12Q7Z6I5 190 aa10.96□□□□□ -0.65
CAPN3-207ENST00000397200 HSPB8Q9UJY1 196 aa10.96□□□□□ -0.65
CAPN3-207ENST00000397200 PAM16Q9Y3D7 125 aa10.96□□□□□ -0.65
CAPN3-207ENST00000397200 SMKR1H3BMG3 65 aa10.95□□□□□ -0.66
CAPN3-207ENST00000397200 SYS1-DBNDD2H3BUS1 97 aa10.95□□□□□ -0.66
CAPN3-207ENST00000397200 NXPH4O95158 308 aa10.95□□□□□ -0.66
CAPN3-207ENST00000397200 NCR2O95944 276 aa10.95□□□□□ -0.66
CAPN3-207ENST00000397200 ASIPP42127 132 aa10.95□□□□□ -0.66
CAPN3-207ENST00000397200 KIR3DS1Q14943 382 aa10.95□□□□□ -0.66
CAPN3-207ENST00000397200 ANXA2RQ3ZCQ2 193 aa10.95□□□□□ -0.66
CAPN3-207ENST00000397200 KPRPQ5T749 579 aaPredicted RBP10.95□□□□□ -0.66
CAPN3-207ENST00000397200 Q8N1Y9 231 aa10.95□□□□□ -0.66
CAPN3-207ENST00000397200 PRSS47A8MTI9 375 aa10.95□□□□□ -0.66
CAPN3-207ENST00000397200 DUSP14O95147 198 aaKnown RBP10.95□□□□□ -0.66
CAPN3-207ENST00000397200 HLA-DRB4P13762 266 aa10.95□□□□□ -0.66
CAPN3-207ENST00000397200 RNASE4P34096 147 aaKnown RBP10.95□□□□□ -0.66
CAPN3-207ENST00000397200 LEPP41159 167 aa10.95□□□□□ -0.66
CAPN3-207ENST00000397200 STHQ8IWL8 128 aa10.95□□□□□ -0.66
CAPN3-207ENST00000397200 HLA-DRB4X5D2U9 266 aa10.95□□□□□ -0.66
CAPN3-207ENST00000397200 AGRNO00468 2067 aa10.94□□□□□ -0.66
CAPN3-207ENST00000397200 A8MTW9 85 aa10.94□□□□□ -0.66
CAPN3-207ENST00000397200 J3KRW8 73 aa10.94□□□□□ -0.66
CAPN3-207ENST00000397200 EVI2AP22794 236 aa10.94□□□□□ -0.66
CAPN3-207ENST00000397200 SPANXN1Q5VSR9 72 aa10.94□□□□□ -0.66
CAPN3-207ENST00000397200 PET117Q6UWS5 81 aa10.94□□□□□ -0.66
CAPN3-207ENST00000397200 SMIM15Q7Z3B0 74 aa10.94□□□□□ -0.66
CAPN3-207ENST00000397200 MIEN1Q9BRT3 115 aa10.94□□□□□ -0.66
CAPN3-207ENST00000397200 MAP1LC3AQ9H492 121 aa10.94□□□□□ -0.66
CAPN3-207ENST00000397200 C20orf202A1L168 122 aa10.93□□□□□ -0.66
CAPN3-207ENST00000397200 H3BMM0 161 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms