RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 OR10AG1Q8NH19 301 aa11.1□□□□□ -0.63
TM9SF1-202ENST00000396854 PRSS3P2Q8NHM4 247 aa11.1□□□□□ -0.63
TM9SF1-202ENST00000396854 SCRT2Q9NQ03 307 aa11.1□□□□□ -0.63
TM9SF1-202ENST00000396854 SELENOKQ9Y6D0 94 aa11.1□□□□□ -0.63
TM9SF1-202ENST00000396854 COX11Q9Y6N1 276 aa11.1□□□□□ -0.63
TM9SF1-202ENST00000396854 RPS20P60866 119 aaKnown RBP11.1□□□□□ -0.63
TM9SF1-202ENST00000396854 RPL11P62913 178 aaKnown RBP11.1□□□□□ -0.63
TM9SF1-202ENST00000396854 CD300EQ496F6 205 aaPredicted RBP11.1□□□□□ -0.63
TM9SF1-202ENST00000396854 C9orf66Q5T8R8 295 aa11.1□□□□□ -0.63
TM9SF1-202ENST00000396854 SLC25A34Q6PIV7 304 aa11.1□□□□□ -0.63
TM9SF1-202ENST00000396854 TMEM61Q8N0U2 210 aa11.1□□□□□ -0.63
TM9SF1-202ENST00000396854 SOCS3O14543 225 aa11.09□□□□□ -0.63
TM9SF1-202ENST00000396854 DCANP1Q8TF63 244 aa11.09□□□□□ -0.63
TM9SF1-202ENST00000396854 TRAV2A0A0B4J234 112 aa11.08□□□□□ -0.63
TM9SF1-202ENST00000396854 D6R8Y8 96 aa11.08□□□□□ -0.63
TM9SF1-202ENST00000396854 SAMD13Q5VXD3 122 aa11.08□□□□□ -0.63
TM9SF1-202ENST00000396854 ZNF738Q8NE65 137 aa11.08□□□□□ -0.63
TM9SF1-202ENST00000396854 MRPL53Q96EL3 112 aaKnown RBP11.08□□□□□ -0.63
TM9SF1-202ENST00000396854 IGKV3-7A0A075B6H7 116 aa11.08□□□□□ -0.64
TM9SF1-202ENST00000396854 TMSB15BA0A087X1C1 80 aa11.08□□□□□ -0.64
TM9SF1-202ENST00000396854 TP73-AS1Q9UF72 201 aa11.08□□□□□ -0.64
TM9SF1-202ENST00000396854 A0A096LNJ9 63 aa11.07□□□□□ -0.64
TM9SF1-202ENST00000396854 WIPF1O43516 503 aa11.07□□□□□ -0.64
TM9SF1-202ENST00000396854 IFI27P40305 119 aaPredicted RBP11.07□□□□□ -0.64
TM9SF1-202ENST00000396854 AMN1Q8IY45 258 aa11.07□□□□□ -0.64
TM9SF1-202ENST00000396854 ORMDL3Q8N138 153 aa11.07□□□□□ -0.64
TM9SF1-202ENST00000396854 PRELID3AQ96N28 172 aa11.07□□□□□ -0.64
TM9SF1-202ENST00000396854 SPAG8Q99932 426 aaPredicted RBP11.07□□□□□ -0.64
TM9SF1-202ENST00000396854 PPP1R14DQ9NXH3 145 aa11.07□□□□□ -0.64
TM9SF1-202ENST00000396854 TRAV8-2A0A0B4J237 113 aa11.07□□□□□ -0.64
TM9SF1-202ENST00000396854 K7EQG2 157 aa11.07□□□□□ -0.64
TM9SF1-202ENST00000396854 IGLC6P0CF74 106 aa11.07□□□□□ -0.64
TM9SF1-202ENST00000396854 VGLL1Q99990 258 aa11.07□□□□□ -0.64
TM9SF1-202ENST00000396854 H0Y8G0 127 aa11.06□□□□□ -0.64
TM9SF1-202ENST00000396854 HLA-DMBP28068 263 aa11.06□□□□□ -0.64
TM9SF1-202ENST00000396854 ZNF80P51504 273 aaPredicted RBP11.06□□□□□ -0.64
TM9SF1-202ENST00000396854 MRPL51Q4U2R6 128 aaKnown RBP11.06□□□□□ -0.64
TM9SF1-202ENST00000396854 FER1L6-AS1Q8NA97 138 aa11.06□□□□□ -0.64
TM9SF1-202ENST00000396854 Q8TAT8 98 aa11.06□□□□□ -0.64
TM9SF1-202ENST00000396854 C16orf92Q96LL3 132 aa11.06□□□□□ -0.64
TM9SF1-202ENST00000396854 RBAKDNA6NC62 111 aa11.05□□□□□ -0.64
TM9SF1-202ENST00000396854 MPV17L2Q567V2 206 aa11.05□□□□□ -0.64
TM9SF1-202ENST00000396854 TIMM8BQ9Y5J9 83 aaPredicted RBP11.05□□□□□ -0.64
TM9SF1-202ENST00000396854 CMYA5Q8N3K9 4069 aa11.05□□□□□ -0.64
TM9SF1-202ENST00000396854 Q6ZVH6 145 aa11.05□□□□□ -0.64
TM9SF1-202ENST00000396854 ZNF256Q9Y2P7 627 aaPredicted RBP11.05□□□□□ -0.64
TM9SF1-202ENST00000396854 CCL25O15444 150 aa11.04□□□□□ -0.64
TM9SF1-202ENST00000396854 NCR2O95944 276 aa11.04□□□□□ -0.64
TM9SF1-202ENST00000396854 ID1P41134 155 aa11.04□□□□□ -0.64
TM9SF1-202ENST00000396854 UBE2V1Q13404 147 aa11.04□□□□□ -0.64
TM9SF1-202ENST00000396854 BVES-AS1Q5T3Y7 98 aa11.04□□□□□ -0.64
TM9SF1-202ENST00000396854 IGFL4Q6B9Z1 124 aa11.04□□□□□ -0.64
TM9SF1-202ENST00000396854 ZNF575Q86XF7 245 aa11.04□□□□□ -0.64
TM9SF1-202ENST00000396854 WFDC3Q8IUB2 231 aa11.04□□□□□ -0.64
TM9SF1-202ENST00000396854 PMCHL2Q9BQD1 86 aa11.04□□□□□ -0.64
TM9SF1-202ENST00000396854 CNFNQ9BYD5 112 aa11.04□□□□□ -0.64
TM9SF1-202ENST00000396854 LOC389332A0A1B0GUA5 103 aa11.04□□□□□ -0.64
TM9SF1-202ENST00000396854 NUDT3O95989 172 aa11.04□□□□□ -0.64
TM9SF1-202ENST00000396854 COX8AP10176 69 aa11.04□□□□□ -0.64
TM9SF1-202ENST00000396854 PTTG1IPP53801 180 aa11.04□□□□□ -0.64
TM9SF1-202ENST00000396854 HIST1H1AQ02539 215 aaPredicted RBP11.04□□□□□ -0.64
TM9SF1-202ENST00000396854 TWIST1Q15672 202 aa11.03□□□□□ -0.64
TM9SF1-202ENST00000396854 RNF182Q8N6D2 247 aa11.03□□□□□ -0.64
TM9SF1-202ENST00000396854 HBDP02042 147 aa11.02□□□□□ -0.64
TM9SF1-202ENST00000396854 LGALS9BQ3B8N2 356 aa11.02□□□□□ -0.64
TM9SF1-202ENST00000396854 LGALS9CQ6DKI2 356 aa11.02□□□□□ -0.64
TM9SF1-202ENST00000396854 C20orf173Q96LM9 149 aa11.02□□□□□ -0.64
TM9SF1-202ENST00000396854 FABP5P3A8MUU1 101 aa11.02□□□□□ -0.65
TM9SF1-202ENST00000396854 CKS2P33552 79 aa11.02□□□□□ -0.65
TM9SF1-202ENST00000396854 SNRPD3P62318 126 aaKnown RBP11.02□□□□□ -0.65
TM9SF1-202ENST00000396854 BEAN1Q3B7T3 259 aa11.02□□□□□ -0.65
TM9SF1-202ENST00000396854 LINC01559Q495D7 138 aa11.02□□□□□ -0.65
TM9SF1-202ENST00000396854 DEFB125Q8N687 156 aa11.02□□□□□ -0.65
TM9SF1-202ENST00000396854 MUC21A0A0G2JKD1 596 aa11.01□□□□□ -0.65
TM9SF1-202ENST00000396854 MUC21A0A140T8X8 626 aa11.01□□□□□ -0.65
TM9SF1-202ENST00000396854 PRAC2D3DTV9 90 aa11.01□□□□□ -0.65
TM9SF1-202ENST00000396854 NPYP01303 97 aa11.01□□□□□ -0.65
TM9SF1-202ENST00000396854 ZNF688P0C7X2 276 aa11.01□□□□□ -0.65
TM9SF1-202ENST00000396854 MUC21Q5SSG8 566 aa11.01□□□□□ -0.65
TM9SF1-202ENST00000396854 OR8A1Q8NGG7 326 aa11.01□□□□□ -0.65
TM9SF1-202ENST00000396854 TAX1BP3O14907 124 aa11□□□□□ -0.65
TM9SF1-202ENST00000396854 C2orf91Q6ZV80 131 aa11□□□□□ -0.65
TM9SF1-202ENST00000396854 LINC01546A6NGU7 62 aa11□□□□□ -0.65
TM9SF1-202ENST00000396854 ORM1P02763 201 aa11□□□□□ -0.65
TM9SF1-202ENST00000396854 PPBPP02775 128 aa11□□□□□ -0.65
TM9SF1-202ENST00000396854 ERCC8Q13216 396 aa11□□□□□ -0.65
TM9SF1-202ENST00000396854 RNF185Q96GF1 192 aa11□□□□□ -0.65
TM9SF1-202ENST00000396854 SMKR1H3BMG3 65 aa10.99□□□□□ -0.65
TM9SF1-202ENST00000396854 PSMG4Q5JS54 123 aa10.99□□□□□ -0.65
TM9SF1-202ENST00000396854 FAM110AQ9BQ89 295 aa10.99□□□□□ -0.65
TM9SF1-202ENST00000396854 MAP6D1Q9H9H5 199 aa10.99□□□□□ -0.65
TM9SF1-202ENST00000396854 PKD1L1Q8TDX9 2849 aa10.99□□□□□ -0.65
TM9SF1-202ENST00000396854 FGF6P10767 208 aa10.99□□□□□ -0.65
TM9SF1-202ENST00000396854 C9orf47Q6ZRZ4 202 aa10.99□□□□□ -0.65
TM9SF1-202ENST00000396854 SORL1Q92673 2214 aa10.99□□□□□ -0.65
TM9SF1-202ENST00000396854 NOTCH3Q9UM47 2321 aa10.98□□□□□ -0.65
TM9SF1-202ENST00000396854 CMC4P56277 68 aaPredicted RBP10.98□□□□□ -0.65
TM9SF1-202ENST00000396854 ODF3L2Q3SX64 289 aa10.98□□□□□ -0.65
TM9SF1-202ENST00000396854 OXLD1Q5BKU9 147 aa10.98□□□□□ -0.65
TM9SF1-202ENST00000396854 IFI27L1Q96BM0 104 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms