RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 POM121L12Q8N7R1 296 aa10.1□□□□□ -0.79
TRIM40-207ENST00000396581 IGHV3OR16-13A0A075B7E8 117 aa10.1□□□□□ -0.79
TRIM40-207ENST00000396581 IGHV3-74A0A0B4J1X5 117 aa10.1□□□□□ -0.79
TRIM40-207ENST00000396581 ETDBQ3ZM63 59 aa10.1□□□□□ -0.79
TRIM40-207ENST00000396581 BAALCQ8WXS3 180 aa10.1□□□□□ -0.79
TRIM40-207ENST00000396581 LINC00477Q96M19 166 aa10.1□□□□□ -0.79
TRIM40-207ENST00000396581 GTSF1LQ9H1H1 148 aa10.1□□□□□ -0.79
TRIM40-207ENST00000396581 DPH3P1Q9H4G8 78 aa10.1□□□□□ -0.79
TRIM40-207ENST00000396581 G3V318 75 aa10.09□□□□□ -0.79
TRIM40-207ENST00000396581 NDUFS8O00217 210 aa10.09□□□□□ -0.79
TRIM40-207ENST00000396581 COX6B1P14854 86 aa10.09□□□□□ -0.79
TRIM40-207ENST00000396581 AMTNQ6UX39 209 aa10.09□□□□□ -0.79
TRIM40-207ENST00000396581 SH2D6Q7Z4S9 175 aa10.09□□□□□ -0.79
TRIM40-207ENST00000396581 C20orf173Q96LM9 149 aa10.09□□□□□ -0.79
TRIM40-207ENST00000396581 LINC01548A6NM66 108 aa10.08□□□□□ -0.8
TRIM40-207ENST00000396581 C19orf54Q5BKX5 351 aa10.08□□□□□ -0.8
TRIM40-207ENST00000396581 APRG1Q8IVJ8 170 aa10.08□□□□□ -0.8
TRIM40-207ENST00000396581 FAM19A4Q96LR4 140 aa10.08□□□□□ -0.8
TRIM40-207ENST00000396581 IGHV3-49A0A0A0MS15 119 aa10.08□□□□□ -0.8
TRIM40-207ENST00000396581 TRAV21A0A0B4J279 112 aa10.08□□□□□ -0.8
TRIM40-207ENST00000396581 SOCS3O14543 225 aa10.08□□□□□ -0.8
TRIM40-207ENST00000396581 HOXA3O43365 443 aaPredicted RBP10.08□□□□□ -0.8
TRIM40-207ENST00000396581 UBE2D1P51668 147 aa10.08□□□□□ -0.8
TRIM40-207ENST00000396581 ATP5J2P56134 94 aa10.08□□□□□ -0.8
TRIM40-207ENST00000396581 C2orf66Q6UXQ4 117 aa10.08□□□□□ -0.8
TRIM40-207ENST00000396581 GPHB5Q86YW7 130 aa10.08□□□□□ -0.8
TRIM40-207ENST00000396581 C10orf105Q8TEF2 133 aa10.08□□□□□ -0.8
TRIM40-207ENST00000396581 C16orf92Q96LL3 132 aa10.08□□□□□ -0.8
TRIM40-207ENST00000396581 CRIP2P52943 208 aaPredicted RBP10.07□□□□□ -0.8
TRIM40-207ENST00000396581 RPL32P62910 135 aaKnown RBP10.07□□□□□ -0.8
TRIM40-207ENST00000396581 ATP6V0E2Q8NHE4 81 aa10.07□□□□□ -0.8
TRIM40-207ENST00000396581 PRADC1Q9BSG0 188 aa10.07□□□□□ -0.8
TRIM40-207ENST00000396581 PIMREGQ9BSJ6 248 aa10.07□□□□□ -0.8
TRIM40-207ENST00000396581 CYSLTR1Q9Y271 337 aa10.07□□□□□ -0.8
TRIM40-207ENST00000396581 AGRNO00468 2067 aa10.07□□□□□ -0.8
TRIM40-207ENST00000396581 SVEP1Q4LDE5 3571 aa10.07□□□□□ -0.8
TRIM40-207ENST00000396581 MAP1AP78559 2803 aaPredicted RBP10.07□□□□□ -0.8
TRIM40-207ENST00000396581 PPP1R17O96001 155 aa10.06□□□□□ -0.8
TRIM40-207ENST00000396581 IGF1P05019 195 aa10.06□□□□□ -0.8
TRIM40-207ENST00000396581 ATP5G2Q06055 141 aa10.06□□□□□ -0.8
TRIM40-207ENST00000396581 C5orf56Q8N8D9 126 aa10.06□□□□□ -0.8
TRIM40-207ENST00000396581 RPL39LQ96EH5 51 aaKnown RBP10.06□□□□□ -0.8
TRIM40-207ENST00000396581 VPS13CQ709C8 3753 aa10.06□□□□□ -0.8
TRIM40-207ENST00000396581 TRBV7-9A0A0J9YWB2 115 aa10.06□□□□□ -0.8
TRIM40-207ENST00000396581 TMEM238LA0A1B0GVL6 79 aa10.06□□□□□ -0.8
TRIM40-207ENST00000396581 PRSS29PA6NIE9 313 aa10.06□□□□□ -0.8
TRIM40-207ENST00000396581 A6NJY4 79 aa10.06□□□□□ -0.8
TRIM40-207ENST00000396581 FAM223BA6NKX1 122 aa10.06□□□□□ -0.8
TRIM40-207ENST00000396581 OVOL1O14753 267 aa10.06□□□□□ -0.8
TRIM40-207ENST00000396581 NXPH4O95158 308 aa10.06□□□□□ -0.8
TRIM40-207ENST00000396581 SAA4P35542 130 aa10.06□□□□□ -0.8
TRIM40-207ENST00000396581 ASIPP42127 132 aa10.06□□□□□ -0.8
TRIM40-207ENST00000396581 SMAGPQ0VAQ4 97 aa10.06□□□□□ -0.8
TRIM40-207ENST00000396581 CFAP126Q5VTH2 177 aa10.06□□□□□ -0.8
TRIM40-207ENST00000396581 FAM223AQ8IWN6 122 aa10.06□□□□□ -0.8
TRIM40-207ENST00000396581 IGHV1-69DA0A0B4J2H0 117 aa10.05□□□□□ -0.8
TRIM40-207ENST00000396581 LINC01549A6NIU2 74 aa10.05□□□□□ -0.8
TRIM40-207ENST00000396581 CLEC2AQ6UVW9 174 aa10.05□□□□□ -0.8
TRIM40-207ENST00000396581 KLK15Q9H2R5 256 aa10.05□□□□□ -0.8
TRIM40-207ENST00000396581 POLQO75417 2590 aa10.05□□□□□ -0.8
TRIM40-207ENST00000396581 IGHV4-61A0A0C4DH41 118 aa10.05□□□□□ -0.8
TRIM40-207ENST00000396581 CRYGDP07320 174 aa10.05□□□□□ -0.8
TRIM40-207ENST00000396581 C14orf178Q8N769 122 aaPredicted RBP10.05□□□□□ -0.8
TRIM40-207ENST00000396581 PGPEP1Q9NXJ5 209 aa10.05□□□□□ -0.8
TRIM40-207ENST00000396581 FBN2P35556 2912 aa10.04□□□□□ -0.8
TRIM40-207ENST00000396581 CELSR2Q9HCU4 2923 aa10.04□□□□□ -0.8
TRIM40-207ENST00000396581 IGHV4OR15-8A0A075B7B6 117 aa10.04□□□□□ -0.8
TRIM40-207ENST00000396581 A0A087WW49 117 aa10.04□□□□□ -0.8
TRIM40-207ENST00000396581 CD7P09564 240 aa10.04□□□□□ -0.8
TRIM40-207ENST00000396581 RNASE3P12724 160 aaKnown RBP10.04□□□□□ -0.8
TRIM40-207ENST00000396581 UBE2D3P61077 147 aa10.04□□□□□ -0.8
TRIM40-207ENST00000396581 UBE2D2P62837 147 aa10.04□□□□□ -0.8
TRIM40-207ENST00000396581 ANXA2RQ3ZCQ2 193 aa10.04□□□□□ -0.8
TRIM40-207ENST00000396581 DLX4Q92988 240 aaPredicted RBP10.04□□□□□ -0.8
TRIM40-207ENST00000396581 KIF25-AS1Q9Y6Z4 181 aa10.04□□□□□ -0.8
TRIM40-207ENST00000396581 ABCA2Q9BZC7 2435 aa10.03□□□□□ -0.8
TRIM40-207ENST00000396581 ZNF815PA8K554 130 aa10.03□□□□□ -0.8
TRIM40-207ENST00000396581 SMCPP49901 116 aaPredicted RBP10.03□□□□□ -0.8
TRIM40-207ENST00000396581 INSL3P51460 131 aa10.03□□□□□ -0.8
TRIM40-207ENST00000396581 LINC00315P59091 139 aa10.03□□□□□ -0.8
TRIM40-207ENST00000396581 PAPPA-AS1Q5QFB9 102 aa10.03□□□□□ -0.8
TRIM40-207ENST00000396581 OR10J6PQ8NGY7 276 aa10.03□□□□□ -0.8
TRIM40-207ENST00000396581 NRGNQ92686 78 aa10.03□□□□□ -0.8
TRIM40-207ENST00000396581 C1QTNF4Q9BXJ3 329 aa10.03□□□□□ -0.8
TRIM40-207ENST00000396581 PHLDA3Q9Y5J5 127 aa10.03□□□□□ -0.8
TRIM40-207ENST00000396581 ABCA12Q86UK0 2595 aa10.03□□□□□ -0.8
TRIM40-207ENST00000396581 IGLV4-69A0A075B6H9 119 aa10.03□□□□□ -0.8
TRIM40-207ENST00000396581 IGHV4-30-2A0A087WSY4 118 aa10.03□□□□□ -0.8
TRIM40-207ENST00000396581 S100A4P26447 101 aaKnown RBP10.03□□□□□ -0.8
TRIM40-207ENST00000396581 DSCR9P59020 149 aa10.03□□□□□ -0.8
TRIM40-207ENST00000396581 FOXI1Q12951 378 aa10.03□□□□□ -0.8
TRIM40-207ENST00000396581 PLEKHB2Q96CS7 222 aa10.03□□□□□ -0.8
TRIM40-207ENST00000396581 NAV2Q8IVL1 2488 aa10.02□□□□□ -0.8
TRIM40-207ENST00000396581 CSMD2Q7Z408 3487 aa10.02□□□□□ -0.8
TRIM40-207ENST00000396581 IGIPA6NJ69 53 aa10.02□□□□□ -0.81
TRIM40-207ENST00000396581 NDUFA4O00483 81 aa10.02□□□□□ -0.81
TRIM40-207ENST00000396581 BRI3O95415 125 aa10.02□□□□□ -0.81
TRIM40-207ENST00000396581 TSHBP01222 138 aa10.02□□□□□ -0.81
TRIM40-207ENST00000396581 LCNL1Q6ZST4 164 aa10.02□□□□□ -0.81
TRIM40-207ENST00000396581 MRPL16Q9NX20 251 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms