RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 ATP5LO75964 103 aa12.05□□□□□ -0.48
SNX6-202ENST00000396526 DEFB131AP59861 70 aa12.05□□□□□ -0.48
SNX6-202ENST00000396526 LAGE3Q14657 143 aa12.05□□□□□ -0.48
SNX6-202ENST00000396526 DEFB125Q8N687 156 aa12.05□□□□□ -0.48
SNX6-202ENST00000396526 C20orf78Q9BR46 151 aa12.05□□□□□ -0.48
SNX6-202ENST00000396526 SNHG12Q9BXW3 62 aa12.05□□□□□ -0.48
SNX6-202ENST00000396526 TEX15Q9BXT5 2789 aa12.05□□□□□ -0.48
SNX6-202ENST00000396526 APCP25054 2843 aa12.05□□□□□ -0.48
SNX6-202ENST00000396526 CHD6Q8TD26 2715 aa12.05□□□□□ -0.48
SNX6-202ENST00000396526 RNASE3P12724 160 aaKnown RBP12.05□□□□□ -0.48
SNX6-202ENST00000396526 SPINK13Q1W4C9 94 aa12.05□□□□□ -0.48
SNX6-202ENST00000396526 IGHV1OR15-1A0A075B7D0 117 aa12.05□□□□□ -0.48
SNX6-202ENST00000396526 MAJINQ3KP22 176 aa12.05□□□□□ -0.48
SNX6-202ENST00000396526 TRAV26-2A0A0B4J265 109 aa12.04□□□□□ -0.48
SNX6-202ENST00000396526 LINC01546A6NGU7 62 aa12.04□□□□□ -0.48
SNX6-202ENST00000396526 PRSS1P07477 247 aa12.04□□□□□ -0.48
SNX6-202ENST00000396526 DLX4Q92988 240 aaPredicted RBP12.04□□□□□ -0.48
SNX6-202ENST00000396526 TRGV11A0A075B6L2 103 aa12.04□□□□□ -0.48
SNX6-202ENST00000396526 A0A096LNJ9 63 aa12.04□□□□□ -0.48
SNX6-202ENST00000396526 K7EMI3 77 aa12.04□□□□□ -0.48
SNX6-202ENST00000396526 FXYD7P58549 80 aa12.04□□□□□ -0.48
SNX6-202ENST00000396526 NRACQ8N912 160 aa12.04□□□□□ -0.48
SNX6-202ENST00000396526 DUX3Q96PT4 197 aa12.04□□□□□ -0.48
SNX6-202ENST00000396526 SUMO2P61956 95 aaKnown RBP12.03□□□□□ -0.48
SNX6-202ENST00000396526 BATFQ16520 125 aa12.03□□□□□ -0.48
SNX6-202ENST00000396526 ORMDL2Q53FV1 153 aa12.03□□□□□ -0.48
SNX6-202ENST00000396526 SLC25A34Q6PIV7 304 aa12.03□□□□□ -0.48
SNX6-202ENST00000396526 TRAV12-2A0A075B6T6 113 aa12.03□□□□□ -0.48
SNX6-202ENST00000396526 GAS8-AS1O95177 125 aa12.03□□□□□ -0.48
SNX6-202ENST00000396526 G0S2P27469 103 aa12.03□□□□□ -0.48
SNX6-202ENST00000396526 TMEM158Q8WZ71 300 aa12.03□□□□□ -0.48
SNX6-202ENST00000396526 JMJD8Q96S16 334 aa12.03□□□□□ -0.48
SNX6-202ENST00000396526 PMCHL2Q9BQD1 86 aa12.03□□□□□ -0.48
SNX6-202ENST00000396526 SMIM2Q9BVW6 85 aa12.03□□□□□ -0.48
SNX6-202ENST00000396526 ITPR3Q14573 2671 aa12.03□□□□□ -0.48
SNX6-202ENST00000396526 hDV102S1A0JD36 115 aa12.02□□□□□ -0.48
SNX6-202ENST00000396526 F5H697 171 aa12.02□□□□□ -0.48
SNX6-202ENST00000396526 EREGO14944 169 aa12.02□□□□□ -0.48
SNX6-202ENST00000396526 RNASE1P07998 156 aaKnown RBP12.02□□□□□ -0.48
SNX6-202ENST00000396526 LURAP1LQ8IV03 231 aa12.02□□□□□ -0.48
SNX6-202ENST00000396526 TMEM61Q8N0U2 210 aa12.02□□□□□ -0.48
SNX6-202ENST00000396526 MRPS16Q9Y3D3 137 aaKnown RBP12.02□□□□□ -0.48
SNX6-202ENST00000396526 NUDT3O95989 172 aa12.02□□□□□ -0.49
SNX6-202ENST00000396526 C18orf15Q96N68 181 aa12.02□□□□□ -0.49
SNX6-202ENST00000396526 SPAG8Q99932 426 aaPredicted RBP12.02□□□□□ -0.49
SNX6-202ENST00000396526 MCRIP2Q9BUT9 160 aaKnown RBP12.02□□□□□ -0.49
SNX6-202ENST00000396526 SORL1Q92673 2214 aa12.02□□□□□ -0.49
SNX6-202ENST00000396526 NXPH4O95158 308 aa12.02□□□□□ -0.49
SNX6-202ENST00000396526 TRAV25A0A0B4J276 109 aa12.01□□□□□ -0.49
SNX6-202ENST00000396526 ADAMTSL5Q6ZMM2 481 aa12.01□□□□□ -0.49
SNX6-202ENST00000396526 TSSC4Q9Y5U2 329 aaPredicted RBP12.01□□□□□ -0.49
SNX6-202ENST00000396526 CCL24O00175 119 aa12.01□□□□□ -0.49
SNX6-202ENST00000396526 HLA-DRB4P13762 266 aa12.01□□□□□ -0.49
SNX6-202ENST00000396526 RAX2Q96IS3 184 aa12.01□□□□□ -0.49
SNX6-202ENST00000396526 HLA-DRB4X5D2U9 266 aa12.01□□□□□ -0.49
SNX6-202ENST00000396526 DEFB114Q30KQ6 69 aa12.01□□□□□ -0.49
SNX6-202ENST00000396526 C11orf44Q8N8P7 122 aa12.01□□□□□ -0.49
SNX6-202ENST00000396526 ESM1Q9NQ30 184 aa12.01□□□□□ -0.49
SNX6-202ENST00000396526 A0A1W2PRX2 142 aa12□□□□□ -0.49
SNX6-202ENST00000396526 SPRY2O43597 315 aa12□□□□□ -0.49
SNX6-202ENST00000396526 VPS13CQ709C8 3753 aa12□□□□□ -0.49
SNX6-202ENST00000396526 A0A1B0GV90 55 aa12□□□□□ -0.49
SNX6-202ENST00000396526 KNCNA6PVL3 124 aa12□□□□□ -0.49
SNX6-202ENST00000396526 IGHV3-16A0A0C4DH30 117 aa11.99□□□□□ -0.49
SNX6-202ENST00000396526 CBY3A6NI87 242 aa11.99□□□□□ -0.49
SNX6-202ENST00000396526 C16orf95Q9H693 158 aa11.99□□□□□ -0.49
SNX6-202ENST00000396526 IGLV2-18A0A075B6J9 118 aa11.99□□□□□ -0.49
SNX6-202ENST00000396526 KRTAP1-1Q07627 177 aa11.99□□□□□ -0.49
SNX6-202ENST00000396526 COL5A1-AS1Q5SY13 56 aa11.99□□□□□ -0.49
SNX6-202ENST00000396526 Q8N1Y9 231 aa11.99□□□□□ -0.49
SNX6-202ENST00000396526 TMEM160Q9NX00 188 aa11.99□□□□□ -0.49
SNX6-202ENST00000396526 FLNAP21333 2647 aaKnown RBP11.99□□□□□ -0.49
SNX6-202ENST00000396526 H3BMM0 161 aa11.98□□□□□ -0.49
SNX6-202ENST00000396526 TCAPO15273 167 aa11.98□□□□□ -0.49
SNX6-202ENST00000396526 LINC01549A6NIU2 74 aa11.98□□□□□ -0.49
SNX6-202ENST00000396526 RASL10AQ92737 203 aa11.98□□□□□ -0.49
SNX6-202ENST00000396526 C9orf85Q96MD7 179 aa11.98□□□□□ -0.49
SNX6-202ENST00000396526 AMTNQ6UX39 209 aa11.98□□□□□ -0.49
SNX6-202ENST00000396526 LINC01006Q8NI28 216 aa11.98□□□□□ -0.49
SNX6-202ENST00000396526 CD28P10747 220 aa11.97□□□□□ -0.49
SNX6-202ENST00000396526 CMC4P56277 68 aaPredicted RBP11.97□□□□□ -0.49
SNX6-202ENST00000396526 CD300EQ496F6 205 aaPredicted RBP11.97□□□□□ -0.49
SNX6-202ENST00000396526 HELZ2Q9BYK8 2649 aaKnown RBP11.97□□□□□ -0.49
SNX6-202ENST00000396526 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.97□□□□□ -0.49
SNX6-202ENST00000396526 HILS1P60008 231 aa11.96□□□□□ -0.49
SNX6-202ENST00000396526 NUTF2P61970 127 aaKnown RBP11.96□□□□□ -0.49
SNX6-202ENST00000396526 FAM74A4Q5TZK3 123 aa11.96□□□□□ -0.49
SNX6-202ENST00000396526 KIR2DL4Q99706 377 aa11.96□□□□□ -0.49
SNX6-202ENST00000396526 CITED2Q99967 270 aaPredicted RBP11.96□□□□□ -0.49
SNX6-202ENST00000396526 MAP6D1Q9H9H5 199 aa11.96□□□□□ -0.49
SNX6-202ENST00000396526 MDFICQ9P1T7 246 aa11.96□□□□□ -0.49
SNX6-202ENST00000396526 HTN1P15515 57 aa11.96□□□□□ -0.5
SNX6-202ENST00000396526 ZNF876PQ49A33 203 aa11.95□□□□□ -0.5
SNX6-202ENST00000396526 RPL39LQ96EH5 51 aaKnown RBP11.95□□□□□ -0.5
SNX6-202ENST00000396526 CSTL1Q9H114 145 aa11.95□□□□□ -0.5
SNX6-202ENST00000396526 ACANP16112 2415 aa11.95□□□□□ -0.5
SNX6-202ENST00000396526 HIVEP2P31629 2446 aa11.95□□□□□ -0.5
SNX6-202ENST00000396526 A0A087WWL8 130 aa11.95□□□□□ -0.5
SNX6-202ENST00000396526 VCYO14598 125 aa11.95□□□□□ -0.5
SNX6-202ENST00000396526 ZNF56Q15929 161 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms