RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 POM121L12Q8N7R1 296 aa11.83□□□□□ -0.52
HOXA3-202ENST00000396352 OR11H1Q8NG94 326 aa11.83□□□□□ -0.52
HOXA3-202ENST00000396352 OR11H2Q8NH07 326 aa11.83□□□□□ -0.52
HOXA3-202ENST00000396352 ZNF479Q96JC4 524 aa11.83□□□□□ -0.52
HOXA3-202ENST00000396352 ITPR1Q14643 2758 aa11.82□□□□□ -0.52
HOXA3-202ENST00000396352 A0A1B0GWB2 263 aa11.82□□□□□ -0.52
HOXA3-202ENST00000396352 NXPH4O95158 308 aa11.82□□□□□ -0.52
HOXA3-202ENST00000396352 IGHG2P01859 326 aa11.82□□□□□ -0.52
HOXA3-202ENST00000396352 USMG5Q96IX5 58 aa11.82□□□□□ -0.52
HOXA3-202ENST00000396352 RPL11P62913 178 aaKnown RBP11.82□□□□□ -0.52
HOXA3-202ENST00000396352 TRBV7-9A0A0J9YWB2 115 aa11.81□□□□□ -0.52
HOXA3-202ENST00000396352 H3BUA1 57 aa11.81□□□□□ -0.52
HOXA3-202ENST00000396352 LGALS1P09382 135 aaKnown RBP11.81□□□□□ -0.52
HOXA3-202ENST00000396352 LINC00315P59091 139 aa11.81□□□□□ -0.52
HOXA3-202ENST00000396352 LY6EQ16553 131 aa11.81□□□□□ -0.52
HOXA3-202ENST00000396352 KIF25-AS1Q9Y6Z4 181 aa11.81□□□□□ -0.52
HOXA3-202ENST00000396352 IGKV3-7A0A075B6H7 116 aa11.81□□□□□ -0.52
HOXA3-202ENST00000396352 PRSS29PA6NIE9 313 aa11.81□□□□□ -0.52
HOXA3-202ENST00000396352 IGHV4-38-2P0DP08 117 aa11.81□□□□□ -0.52
HOXA3-202ENST00000396352 RPL24P83731 157 aaKnown RBP11.8□□□□□ -0.52
HOXA3-202ENST00000396352 RHPN1-AS1Q9BWJ2 59 aa11.8□□□□□ -0.52
HOXA3-202ENST00000396352 LY6DQ14210 128 aa11.8□□□□□ -0.52
HOXA3-202ENST00000396352 LCNL1Q6ZST4 164 aa11.8□□□□□ -0.52
HOXA3-202ENST00000396352 IGHV4-61A0A0C4DH41 118 aa11.8□□□□□ -0.52
HOXA3-202ENST00000396352 Q6ZS46 218 aa11.8□□□□□ -0.52
HOXA3-202ENST00000396352 PRADC1Q9BSG0 188 aa11.8□□□□□ -0.52
HOXA3-202ENST00000396352 CRYGDP07320 174 aa11.79□□□□□ -0.52
HOXA3-202ENST00000396352 RRN3P1Q2M238 152 aa11.79□□□□□ -0.52
HOXA3-202ENST00000396352 A6NDX4 124 aa11.79□□□□□ -0.52
HOXA3-202ENST00000396352 F8W1H4 67 aa11.79□□□□□ -0.52
HOXA3-202ENST00000396352 EDN2P20800 178 aa11.79□□□□□ -0.52
HOXA3-202ENST00000396352 KLLNB2CW77 178 aa11.78□□□□□ -0.52
HOXA3-202ENST00000396352 H3BMG7 143 aa11.78□□□□□ -0.52
HOXA3-202ENST00000396352 H3BUX3 64 aa11.78□□□□□ -0.52
HOXA3-202ENST00000396352 DUSP14O95147 198 aaKnown RBP11.78□□□□□ -0.52
HOXA3-202ENST00000396352 PF4V1P10720 104 aa11.78□□□□□ -0.52
HOXA3-202ENST00000396352 COX6B1P14854 86 aa11.78□□□□□ -0.52
HOXA3-202ENST00000396352 WFDC2Q14508 124 aa11.78□□□□□ -0.52
HOXA3-202ENST00000396352 CYSLTR1Q9Y271 337 aa11.78□□□□□ -0.52
HOXA3-202ENST00000396352 PPP1R17O96001 155 aa11.78□□□□□ -0.52
HOXA3-202ENST00000396352 TSHBP01222 138 aa11.78□□□□□ -0.52
HOXA3-202ENST00000396352 BLCAPP62952 87 aa11.78□□□□□ -0.52
HOXA3-202ENST00000396352 SPANXB1Q9NS25 103 aaPredicted RBP11.78□□□□□ -0.52
HOXA3-202ENST00000396352 COL12A1Q99715 3063 aa11.78□□□□□ -0.52
HOXA3-202ENST00000396352 SPTAN1Q13813 2472 aaKnown RBP11.77□□□□□ -0.52
HOXA3-202ENST00000396352 IGLV1-40P01703 118 aa11.77□□□□□ -0.52
HOXA3-202ENST00000396352 DAZ1Q9NQZ3 744 aaKnown RBP11.77□□□□□ -0.52
HOXA3-202ENST00000396352 IGHV4OR15-8A0A075B7B6 117 aa11.77□□□□□ -0.53
HOXA3-202ENST00000396352 A0A087WW49 117 aa11.77□□□□□ -0.53
HOXA3-202ENST00000396352 SRD5A1P18405 259 aa11.77□□□□□ -0.53
HOXA3-202ENST00000396352 MORN3Q6PF18 240 aaPredicted RBP11.77□□□□□ -0.53
HOXA3-202ENST00000396352 AMTNQ6UX39 209 aa11.77□□□□□ -0.53
HOXA3-202ENST00000396352 IGLV4-69A0A075B6H9 119 aa11.77□□□□□ -0.53
HOXA3-202ENST00000396352 RPL32P62910 135 aaKnown RBP11.77□□□□□ -0.53
HOXA3-202ENST00000396352 JPT2Q9H910 190 aa11.77□□□□□ -0.53
HOXA3-202ENST00000396352 PLEKHB2Q96CS7 222 aa11.76□□□□□ -0.53
HOXA3-202ENST00000396352 PRO0461Q9UI25 63 aa11.76□□□□□ -0.53
HOXA3-202ENST00000396352 IGIPA6NJ69 53 aa11.75□□□□□ -0.53
HOXA3-202ENST00000396352 ZNF815PA8K554 130 aa11.75□□□□□ -0.53
HOXA3-202ENST00000396352 POLR2KP53803 58 aaKnown RBP11.75□□□□□ -0.53
HOXA3-202ENST00000396352 CFHR3Q02985 330 aa11.75□□□□□ -0.53
HOXA3-202ENST00000396352 SUMO4Q6EEV6 95 aa11.75□□□□□ -0.53
HOXA3-202ENST00000396352 DCANP1Q8TF63 244 aa11.75□□□□□ -0.53
HOXA3-202ENST00000396352 PIMREGQ9BSJ6 248 aa11.75□□□□□ -0.53
HOXA3-202ENST00000396352 TP53TG1Q9Y2A0 90 aa11.75□□□□□ -0.53
HOXA3-202ENST00000396352 CELSR2Q9HCU4 2923 aa11.75□□□□□ -0.53
HOXA3-202ENST00000396352 C11orf86A6NJI1 115 aa11.75□□□□□ -0.53
HOXA3-202ENST00000396352 TMEM238C9JI98 176 aa11.75□□□□□ -0.53
HOXA3-202ENST00000396352 ZFP2Q6ZN57 461 aa11.75□□□□□ -0.53
HOXA3-202ENST00000396352 DEFB104AQ8WTQ1 72 aa11.74□□□□□ -0.53
HOXA3-202ENST00000396352 FAM159AQ6UWV7 190 aa11.73□□□□□ -0.53
HOXA3-202ENST00000396352 C10orf105Q8TEF2 133 aa11.73□□□□□ -0.53
HOXA3-202ENST00000396352 HOXA3O43365 443 aaPredicted RBP11.73□□□□□ -0.53
HOXA3-202ENST00000396352 KLHL30-AS1Q8NEE0 82 aa11.73□□□□□ -0.53
HOXA3-202ENST00000396352 WFDC12Q8WWY7 111 aa11.73□□□□□ -0.53
HOXA3-202ENST00000396352 SPTBN4Q9H254 2564 aa11.73□□□□□ -0.53
HOXA3-202ENST00000396352 A0A087WWL8 130 aa11.73□□□□□ -0.53
HOXA3-202ENST00000396352 RPL39P62891 51 aaKnown RBP11.73□□□□□ -0.53
HOXA3-202ENST00000396352 CD300EQ496F6 205 aaPredicted RBP11.73□□□□□ -0.53
HOXA3-202ENST00000396352 SH2D6Q7Z4S9 175 aa11.73□□□□□ -0.53
HOXA3-202ENST00000396352 MTURNQ8N3F0 131 aa11.73□□□□□ -0.53
HOXA3-202ENST00000396352 CHD8Q9HCK8 2581 aa11.73□□□□□ -0.53
HOXA3-202ENST00000396352 CRYBG3Q68DQ2 2970 aa11.72□□□□□ -0.53
HOXA3-202ENST00000396352 NCOR2Q9Y618 2525 aa11.72□□□□□ -0.53
HOXA3-202ENST00000396352 GNLYP22749 145 aa11.72□□□□□ -0.53
HOXA3-202ENST00000396352 UBE2D1P51668 147 aa11.72□□□□□ -0.53
HOXA3-202ENST00000396352 EMP1P54849 157 aa11.72□□□□□ -0.53
HOXA3-202ENST00000396352 SCGB2A2Q13296 93 aa11.72□□□□□ -0.53
HOXA3-202ENST00000396352 ETDBQ3ZM63 59 aa11.72□□□□□ -0.53
HOXA3-202ENST00000396352 GAGE13Q4V321 117 aa11.72□□□□□ -0.53
HOXA3-202ENST00000396352 PGPEP1Q9NXJ5 209 aa11.72□□□□□ -0.53
HOXA3-202ENST00000396352 K7EMT4 169 aa11.71□□□□□ -0.53
HOXA3-202ENST00000396352 SCGB1D4Q6XE38 83 aa11.71□□□□□ -0.53
HOXA3-202ENST00000396352 TRAV12-3A0A0B4J271 114 aa11.71□□□□□ -0.53
HOXA3-202ENST00000396352 CD7P09564 240 aa11.71□□□□□ -0.53
HOXA3-202ENST00000396352 PMVKQ15126 192 aa11.71□□□□□ -0.53
HOXA3-202ENST00000396352 MAP1AP78559 2803 aaPredicted RBP11.71□□□□□ -0.54
HOXA3-202ENST00000396352 LINC01549A6NIU2 74 aa11.7□□□□□ -0.54
HOXA3-202ENST00000396352 LGALS9O00182 355 aa11.7□□□□□ -0.54
HOXA3-202ENST00000396352 VCYO14598 125 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms