RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 SPIN2BQ9BPZ2 258 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 THTPAQ9BU02 230 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 SH3BGRL3Q9H299 93 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 ZNF331Q9NQX6 463 aaPredicted RBP3.42□□□□□ -1.86
AP3S1-202ENST00000395548 DAZ3Q9NR90 486 aaKnown RBP3.42□□□□□ -1.86
AP3S1-202ENST00000395548 PAIP2BQ9ULR5 123 aaKnown RBP3.42□□□□□ -1.86
AP3S1-202ENST00000395548 V9GYS6 101 aa3.42□□□□□ -1.86
AP3S1-202ENST00000395548 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 TRAV5A0A0B4J249 113 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 A6NIN4 97 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 H0YJW9 148 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.41□□□□□ -1.86
AP3S1-202ENST00000395548 M0R381 172 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 SOCS1O15524 211 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 SULT1C4O75897 302 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 SPI1P17947 270 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 S100A1P23297 94 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 OR10J1P30954 320 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 HIGD2BQ4VC39 106 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 EBLN2Q6P2I7 272 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 MSRB3Q8IXL7 192 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 BAP18Q8IXM2 172 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 TMEM256Q8N2U0 113 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 TTC9CQ8N5M4 171 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 OR4B1Q8NGF8 309 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 COMMD5Q9GZQ3 224 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 SND1-IT1Q9HBX3 110 aa3.41□□□□□ -1.86
AP3S1-202ENST00000395548 A0A0D9SG52 128 aa3.4□□□□□ -1.87
AP3S1-202ENST00000395548 NDUFA4O00483 81 aa3.4□□□□□ -1.87
AP3S1-202ENST00000395548 NDUFC2O95298 119 aa3.4□□□□□ -1.87
AP3S1-202ENST00000395548 ZNF682O95780 498 aa3.4□□□□□ -1.87
AP3S1-202ENST00000395548 SAA2P0DJI9 122 aaPredicted RBP3.4□□□□□ -1.87
AP3S1-202ENST00000395548 HIST1H1BP16401 226 aaKnown RBP3.4□□□□□ -1.87
AP3S1-202ENST00000395548 DEFA1P59665 94 aa3.4□□□□□ -1.87
AP3S1-202ENST00000395548 RPS20P60866 119 aaKnown RBP3.4□□□□□ -1.87
AP3S1-202ENST00000395548 MORN2Q502X0 79 aa3.4□□□□□ -1.87
AP3S1-202ENST00000395548 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
AP3S1-202ENST00000395548 SAXO1Q8IYX7 474 aa3.4□□□□□ -1.87
AP3S1-202ENST00000395548 OR8A1Q8NGG7 326 aa3.4□□□□□ -1.87
AP3S1-202ENST00000395548 OTOSQ8NHW6 89 aa3.4□□□□□ -1.87
AP3S1-202ENST00000395548 GPR146Q96CH1 333 aa3.4□□□□□ -1.87
AP3S1-202ENST00000395548 PYURFQ96I23 114 aa3.4□□□□□ -1.87
AP3S1-202ENST00000395548 DNAJC30Q96LL9 226 aa3.4□□□□□ -1.87
AP3S1-202ENST00000395548 RHPN1-AS1Q9BWJ2 59 aa3.4□□□□□ -1.87
AP3S1-202ENST00000395548 C8orf17Q9NRJ1 99 aa3.4□□□□□ -1.87
AP3S1-202ENST00000395548 KCNIP2Q9NS61 270 aa3.4□□□□□ -1.87
AP3S1-202ENST00000395548 IGHV7-4-1A0A0J9YVY3 117 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 A0A1W2PRE2 83 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 A8MWL6 223 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 AIPO00170 330 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 APOMO95445 188 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 CXorf1O96002 111 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 APOA2P02652 100 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 DEFB130BP0DP73 79 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 DEFB130AP0DP74 79 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 RRN3P1Q2M238 152 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 TCF24Q7RTU0 167 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 ZNF414Q96IQ9 312 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 CCDC90BQ9GZT6 254 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 WFDC1Q9HC57 220 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 TVP23BQ9NYZ1 205 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 JPT1Q9UK76 154 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 TP53TG3Q9ULZ0 132 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 LY96Q9Y6Y9 160 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 S4R3C0 116 aa3.39□□□□□ -1.87
AP3S1-202ENST00000395548 IGKV1-6A0A0C4DH72 117 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 C9JCJ5 164 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 H3BNG1 76 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 ZNF207O43670 478 aaKnown RBP3.38□□□□□ -1.87
AP3S1-202ENST00000395548 CREBL2O60519 120 aaPredicted RBP3.38□□□□□ -1.87
AP3S1-202ENST00000395548 YPEL1O60688 119 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 LTAP01374 205 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 IGKV1-39P01597 117 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 APCSP02743 223 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 IGKV1D-39P04432 117 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 GYPBP06028 91 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 EVI2AP22794 236 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 LINC00313P59037 77 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 IBA57Q5T440 356 aaKnown RBP3.38□□□□□ -1.87
AP3S1-202ENST00000395548 PCP2Q8IVA1 136 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 C10orf126Q8N4M7 172 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 OR4C16Q8NGL9 310 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 PP6455Q8WZ26 134 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 YPEL2Q96QA6 119 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 PFDN5Q99471 154 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 TMEM222Q9H0R3 208 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 RPP21Q9H633 154 aaKnown RBP3.38□□□□□ -1.87
AP3S1-202ENST00000395548 ZNF492Q9P255 531 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 TRAPPC2LQ9UL33 140 aa3.38□□□□□ -1.87
AP3S1-202ENST00000395548 IGHV3-49A0A0A0MS15 119 aa3.37□□□□□ -1.87
AP3S1-202ENST00000395548 IGKV1-12A0A0C4DH73 117 aa3.37□□□□□ -1.87
AP3S1-202ENST00000395548 A0A1B0GVX0 72 aa3.37□□□□□ -1.87
AP3S1-202ENST00000395548 BPY2O14599 106 aa3.37□□□□□ -1.87
AP3S1-202ENST00000395548 GSTZ1O43708 216 aaPredicted RBP3.37□□□□□ -1.87
AP3S1-202ENST00000395548 OR7C2O60412 319 aa3.37□□□□□ -1.87
AP3S1-202ENST00000395548 IGKV1D-12P01611 117 aa3.37□□□□□ -1.87
AP3S1-202ENST00000395548 IGKV1-16P04430 117 aa3.37□□□□□ -1.87
AP3S1-202ENST00000395548 PPP1CCP36873 323 aaKnown RBP3.37□□□□□ -1.87
AP3S1-202ENST00000395548 RHEBQ15382 184 aa3.37□□□□□ -1.87
AP3S1-202ENST00000395548 RNASE13Q5GAN3 156 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms