RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 XCL2Q9UBD3 114 aa13.45□□□□□ -0.26
SIN3A-203ENST00000394949 ANKHD1Q8IWZ3 2542 aaKnown RBP13.45□□□□□ -0.26
SIN3A-203ENST00000394949 KMT2EQ8IZD2 1858 aa13.45□□□□□ -0.26
SIN3A-203ENST00000394949 CSPG4Q6UVK1 2322 aa13.44□□□□□ -0.26
SIN3A-203ENST00000394949 IGKV1OR2-108A0A075B7D4 117 aa13.44□□□□□ -0.26
SIN3A-203ENST00000394949 J3QKU1 62 aa13.44□□□□□ -0.26
SIN3A-203ENST00000394949 BAALC-AS2P0C853 105 aa13.44□□□□□ -0.26
SIN3A-203ENST00000394949 MAPK1IP1LQ8NDC0 245 aa13.44□□□□□ -0.26
SIN3A-203ENST00000394949 HERV-K104P63124 156 aa13.44□□□□□ -0.26
SIN3A-203ENST00000394949 ODF3L1Q8IXM7 274 aa13.44□□□□□ -0.26
SIN3A-203ENST00000394949 ELANEP08246 267 aa13.44□□□□□ -0.26
SIN3A-203ENST00000394949 ODF1Q14990 250 aa13.44□□□□□ -0.26
SIN3A-203ENST00000394949 A4D1N5 150 aa13.43□□□□□ -0.26
SIN3A-203ENST00000394949 HAMPP81172 84 aa13.43□□□□□ -0.26
SIN3A-203ENST00000394949 TCTEX1D4Q5JR98 221 aa13.43□□□□□ -0.26
SIN3A-203ENST00000394949 COL4A3Q01955 1670 aa13.43□□□□□ -0.26
SIN3A-203ENST00000394949 MYO18BQ8IUG5 2567 aa13.43□□□□□ -0.26
SIN3A-203ENST00000394949 DENND4CQ5VZ89 1909 aa13.43□□□□□ -0.26
SIN3A-203ENST00000394949 TRAV12-2A0A075B6T6 113 aa13.43□□□□□ -0.26
SIN3A-203ENST00000394949 IGFL2Q6UWQ7 119 aa13.43□□□□□ -0.26
SIN3A-203ENST00000394949 MSRB1Q9NZV6 116 aa13.43□□□□□ -0.26
SIN3A-203ENST00000394949 IGHV3-16A0A0C4DH30 117 aa13.43□□□□□ -0.26
SIN3A-203ENST00000394949 RBMY1FQ15415 496 aaKnown RBP13.43□□□□□ -0.26
SIN3A-203ENST00000394949 NPBQ8NG41 125 aa13.43□□□□□ -0.26
SIN3A-203ENST00000394949 CTSZQ9UBR2 303 aa13.43□□□□□ -0.26
SIN3A-203ENST00000394949 SMIM20Q8N5G0 67 aa13.42□□□□□ -0.26
SIN3A-203ENST00000394949 GNRH2O43555 120 aa13.42□□□□□ -0.26
SIN3A-203ENST00000394949 PRSS33Q8NF86 280 aa13.42□□□□□ -0.26
SIN3A-203ENST00000394949 IGLV11-55A0A075B6I3 123 aa13.42□□□□□ -0.26
SIN3A-203ENST00000394949 EML6Q6ZMW3 1958 aa13.42□□□□□ -0.26
SIN3A-203ENST00000394949 FRMPD3Q5JV73 1810 aa13.41□□□□□ -0.26
SIN3A-203ENST00000394949 CRLF1O75462 422 aa13.41□□□□□ -0.26
SIN3A-203ENST00000394949 IGF2-ASQ6U949 168 aa13.41□□□□□ -0.26
SIN3A-203ENST00000394949 ZFP2Q6ZN57 461 aa13.41□□□□□ -0.26
SIN3A-203ENST00000394949 PIFOQ8TCI5 191 aa13.41□□□□□ -0.26
SIN3A-203ENST00000394949 TOMM6Q96B49 74 aa13.41□□□□□ -0.26
SIN3A-203ENST00000394949 ICOSQ9Y6W8 199 aa13.41□□□□□ -0.26
SIN3A-203ENST00000394949 IGHV3-38A0A0C4DH36 116 aa13.41□□□□□ -0.26
SIN3A-203ENST00000394949 WI2-2373I1.2A0A1W2PRP0 233 aa13.4□□□□□ -0.26
SIN3A-203ENST00000394949 ATOX1O00244 68 aa13.4□□□□□ -0.26
SIN3A-203ENST00000394949 MUSTN1Q8IVN3 82 aa13.4□□□□□ -0.26
SIN3A-203ENST00000394949 DSCR8Q96T75 97 aa13.4□□□□□ -0.26
SIN3A-203ENST00000394949 WNK1Q9H4A3 2382 aa13.4□□□□□ -0.26
SIN3A-203ENST00000394949 TTTY13Q9BZ97 58 aa13.4□□□□□ -0.26
SIN3A-203ENST00000394949 H3BT86 120 aa13.4□□□□□ -0.26
SIN3A-203ENST00000394949 RPL39LQ96EH5 51 aaKnown RBP13.4□□□□□ -0.26
SIN3A-203ENST00000394949 TIMM17AQ99595 171 aa13.39□□□□□ -0.27
SIN3A-203ENST00000394949 Q9H8V8 135 aa13.39□□□□□ -0.27
SIN3A-203ENST00000394949 MED14OSP0DP75 135 aa13.39□□□□□ -0.27
SIN3A-203ENST00000394949 IGLV2-8P01709 118 aa13.39□□□□□ -0.27
SIN3A-203ENST00000394949 A0A0B4J2C4 111 aa13.39□□□□□ -0.27
SIN3A-203ENST00000394949 PSCAO43653 123 aa13.38□□□□□ -0.27
SIN3A-203ENST00000394949 H0YGX0 51 aa13.38□□□□□ -0.27
SIN3A-203ENST00000394949 SUMO4Q6EEV6 95 aa13.38□□□□□ -0.27
SIN3A-203ENST00000394949 ZNF503Q96F45 646 aa13.38□□□□□ -0.27
SIN3A-203ENST00000394949 TRBV10-2A0A0K0K1G8 114 aa13.38□□□□□ -0.27
SIN3A-203ENST00000394949 ORMDL1Q9P0S3 153 aa13.38□□□□□ -0.27
SIN3A-203ENST00000394949 TNRC6AQ8NDV7 1962 aaKnown RBP13.38□□□□□ -0.27
SIN3A-203ENST00000394949 ZNF295-AS1Q8N0V1 137 aa13.38□□□□□ -0.27
SIN3A-203ENST00000394949 SLC25A29Q8N8R3 303 aa13.38□□□□□ -0.27
SIN3A-203ENST00000394949 CRYGCP07315 174 aa13.37□□□□□ -0.27
SIN3A-203ENST00000394949 CTSGP08311 255 aa13.37□□□□□ -0.27
SIN3A-203ENST00000394949 DAD1P61803 113 aa13.37□□□□□ -0.27
SIN3A-203ENST00000394949 BUB3O43684 328 aa13.37□□□□□ -0.27
SIN3A-203ENST00000394949 WT1P19544 449 aaPredicted RBP13.37□□□□□ -0.27
SIN3A-203ENST00000394949 BAALCQ8WXS3 180 aa13.37□□□□□ -0.27
SIN3A-203ENST00000394949 C11orf86A6NJI1 115 aa13.37□□□□□ -0.27
SIN3A-203ENST00000394949 TMEM258P61165 79 aa13.37□□□□□ -0.27
SIN3A-203ENST00000394949 TRAV26-1A0A087WT03 109 aa13.36□□□□□ -0.27
SIN3A-203ENST00000394949 IGLV2-23P01705 113 aa13.36□□□□□ -0.27
SIN3A-203ENST00000394949 C9orf47Q6ZRZ4 202 aa13.36□□□□□ -0.27
SIN3A-203ENST00000394949 TINCRA0A1B0GVN0 87 aa13.35□□□□□ -0.27
SIN3A-203ENST00000394949 F5H768 121 aa13.35□□□□□ -0.27
SIN3A-203ENST00000394949 A0A0J9YXV3 536 aa13.35□□□□□ -0.27
SIN3A-203ENST00000394949 Q71RC1 249 aaPredicted RBP13.35□□□□□ -0.27
SIN3A-203ENST00000394949 MBD6Q96DN6 1003 aa13.35□□□□□ -0.27
SIN3A-203ENST00000394949 J3KT08 172 aa13.35□□□□□ -0.27
SIN3A-203ENST00000394949 RNASE13Q5GAN3 156 aaKnown RBP13.35□□□□□ -0.27
SIN3A-203ENST00000394949 F6UB75 175 aa13.35□□□□□ -0.27
SIN3A-203ENST00000394949 NUP210Q8TEM1 1887 aaPredicted RBP13.34□□□□□ -0.27
SIN3A-203ENST00000394949 TEX22C9J3V5 150 aa13.34□□□□□ -0.27
SIN3A-203ENST00000394949 NXPH4O95158 308 aa13.34□□□□□ -0.27
SIN3A-203ENST00000394949 RBX1P62877 108 aa13.34□□□□□ -0.27
SIN3A-203ENST00000394949 KIAA1671Q9BY89 1806 aa13.34□□□□□ -0.27
SIN3A-203ENST00000394949 TNCP24821 2201 aa13.34□□□□□ -0.27
SIN3A-203ENST00000394949 FAM236AA0A1B0GUQ0 79 aa13.34□□□□□ -0.27
SIN3A-203ENST00000394949 FAM236BA0A1B0GV22 79 aa13.34□□□□□ -0.27
SIN3A-203ENST00000394949 IGHV7-81A0A0B4J1V7 117 aa13.33□□□□□ -0.28
SIN3A-203ENST00000394949 SPRNQ5BIV9 151 aa13.33□□□□□ -0.28
SIN3A-203ENST00000394949 APOC4P55056 127 aa13.33□□□□□ -0.28
SIN3A-203ENST00000394949 ZNF561-AS1K7EIQ3 104 aa13.33□□□□□ -0.28
SIN3A-203ENST00000394949 HOXB4P17483 251 aaPredicted RBP13.33□□□□□ -0.28
SIN3A-203ENST00000394949 C16orf54Q6UWD8 224 aa13.33□□□□□ -0.28
SIN3A-203ENST00000394949 MLST8Q9BVC4 326 aa13.32□□□□□ -0.28
SIN3A-203ENST00000394949 MRPL36Q9P0J6 103 aaKnown RBP13.32□□□□□ -0.28
SIN3A-203ENST00000394949 GDF5OSQ5U4N7 250 aa13.32□□□□□ -0.28
SIN3A-203ENST00000394949 CRIP3Q6Q6R5 217 aa13.32□□□□□ -0.28
SIN3A-203ENST00000394949 Q6ZPA2 131 aa13.32□□□□□ -0.28
SIN3A-203ENST00000394949 RNF152Q8N8N0 203 aa13.32□□□□□ -0.28
SIN3A-203ENST00000394949 TP53TG3Q9ULZ0 132 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms